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(Created page with "{{f5samples |id=FF:11698-123A6 |name=Mesenchymal Stem Cells - adipose, donor3 |sample_id=11698 |rna_tube_id=123A6 |rna_box=123 |rna_position=A6 |sample_cell_lot= |samp...")
 
 
(30 intermediate revisions by the same user not shown)
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{{f5samples
 
{{f5samples
|id=FF:11698-123A6
+
|DRA_sample_Accession=CAGE@SAMD00004705
|name=Mesenchymal Stem Cells - adipose, donor3
+
|accession_numbers=CAGE;DRX008348;DRR009220;DRZ000645;DRZ002030;DRZ011995;DRZ013380
|sample_id=11698
+
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=123A6
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570
|rna_box=123
 
|rna_position=A6
 
|sample_cell_lot=
 
|sample_cell_catalog=
 
|sample_company=Sciencell/3H
 
|rna_lot_number=2534.00000
 
|rna_catalog_number=SC7515
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=
 
|sample_tissue=adipose tissue
 
|sample_donor(cell lot)=
 
|sample_sex=
 
|sample_age=
 
|sample_ethnicity=
 
|rna_rin=
 
|rna_od260/230=
 
|rna_od260/280=
 
|sample_cell_type=mesenchymal stem cell
 
|sample_cell_line=
 
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 
|sample_experimental_condition=
 
|sample_disease=
 
|rna_sample_type=total RNA
 
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
 
|rna_weight_ug=10.00000
 
|rna_concentration=0.42000
 
|sample_note=
 
|profile_hcage=CNhs12922,LSID974,release012,SEQUENCING QUEUE
 
|profile_cagescan=,,,
 
|profile_srnaseq=,,,
 
|profile_rnaseq=,,,
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002570
 
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001013,UBERON:0001062,UBERON:0002384
 
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
|sample_description=
+
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000096
 
+
|comment=
 +
|created_by=
 +
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 +
|def=
 +
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!1.69!63.40!SOX18;;chr1:170632285..170632309,+!p1@PRRX1!1.60!43.96!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!1.56!94.67!TWIST1;;chr17:59477233..59477263,+!p1@TBX2!1.30!57.48!TBX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.29!93.83!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.28!24.51!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!1.23!50.72!TWIST2;;chr1:40105299..40105326,-!p1@HEYL!1.21!15.22!HEYL;;chr17:6926362..6926377,+!p1@BCL6B!1.19!14.37!BCL6B;;chr2:239756739..239756755,+!p2@TWIST2!1.13!21.13!TWIST2;;chr6:34204921..34204939,+!p3@HMGA1!1.11!353.34!HMGA1;;chr2:19558373..19558392,-!p1@OSR1!1.11!32.97!OSR1;;chr1:170633262..170633285,+!p3@PRRX1!1.11!13.52!PRRX1;;chr17:1959369..1959388,+!p2@HIC1!1.08!29.59!HIC1;;chr17:59477275..59477286,+!p3@TBX2!1.07!14.37!TBX2;;chr21:39870339..39870443,-!p1@ERG!1.05!10.14!ERG;;chr8:25902876..25902936,-!p1@EBF2!1.05!10.14!EBF2;;chr11:65686732..65686756,+!p2@DRAP1!1.04!42.27!DRAP1;;chr12:54380036..54380091,+!p4@HOXC10!1.01!9.30!HOXC10;;chr12:54393880..54393962,+!p1@HOXC9!1.01!9.30!HOXC9;;chr12:66218598..66218645,+!p2@HMGA2!1.00!42.27!HMGA2;;chr3:12330560..12330579,+!p1@PPARG!0.99!10.14!PPARG;;chr7:19157043..19157088,-!p2@TWIST1!0.98!21.98!TWIST1;;chr8:49833978..49833996,-!p1@SNAI2!0.97!175.82!SNAI2;;chr7:27205106..27205134,-!p2@HOXA9!0.93!7.61!HOXA9;;chr4:174451370..174451387,-!p1@HAND2!0.93!7.61!HAND2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.93!7.61!HOXC5;;chr8:49833948..49833973,-!p2@SNAI2!0.92!49.03!SNAI2;;chr12:66218255..66218304,+!p3@HMGA2!0.92!20.29!HMGA2;;chr6:85474299..85474324,-!p1@TBX18!0.92!13.52!TBX18;;chr1:170632959..170632987,+!p4@PRRX1!0.90!7.61!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.89!6.76!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.89!6.76!PRRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.89!6.76!HOXC10;;chr2:45236540..45236577,-!p1@SIX2!0.89!6.76!SIX2;;chr5:2751762..2751784,-!p1@IRX2!0.89!6.76!IRX2;;chr9:16705069..16705086,-!p3@BNC2!0.89!6.76!BNC2;;chr11:65687362..65687436,+!p3@DRAP1!0.86!30.43!DRAP1;;chr14:61116183..61116208,-!p1@SIX1!0.84!23.67!SIX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.84!5.92!HOXC5;;chr1:170632723..170632739,+!p8@PRRX1!0.84!5.92!PRRX1;;chr7:27224842..27224872,-!p1@HOXA11!0.84!5.92!HOXA11;;chr8:55370487..55370503,+!p1@SOX17!0.84!5.92!SOX17;;chr11:46299539..46299620,+!p2@CREB3L1!0.83!10.14!CREB3L1;;chr15:57511609..57511651,+!p2@TCF12!0.83!10.14!TCF12;;chr4:4861385..4861398,+!p1@MSX1!0.82!17.75!MSX1;;chr17:59477197..59477212,+!p2@TBX2!0.82!10.14!TBX2;;chr11:65667884..65667895,-!p2@FOSL1!0.81!22.82!FOSL1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.81!5.92!GLIS1;;chr11:65686802..65686818,+!p6@DRAP1!0.79!9.30!DRAP1;;chr18:53068911..53068935,-!p4@TCF4!0.79!5.92!TCF4;;chr17:1958388..1958404,+!p1@HIC1!0.78!34.66!HIC1;;chr16:86612320..86612394,+!p1@FOXL1!0.78!5.07!FOXL1;;chr12:54402745..54402788,+!p1@HOXC8!0.78!5.07!HOXC8;;chr19:46801639..46801699,+!p1@HIF3A!0.78!5.07!HIF3A;;chr8:72756063..72756125,-!p1@MSC!0.76!10.14!MSC;;chr12:66218183..66218209,+!p4@HMGA2!0.74!9.30!HMGA2;;chr19:45260775..45260838,+!p5@BCL3!0.73!5.92!BCL3;;chr19:45261550..45261641,+!p6@BCL3!0.72!7.61!BCL3;;chr19:47523058..47523114,+!p1@NPAS1!0.72!4.23!NPAS1;;chr1:170632115..170632136,+!p9@PRRX1!0.72!4.23!PRRX1;;chr11:65688877..65688891,+!p13@DRAP1!0.72!4.23!DRAP1;;chr12:54380112..54380126,+!p5@HOXC10!0.72!4.23!HOXC10;;chr12:66218420..66218439,+!p12@HMGA2!0.72!4.23!HMGA2;;chr15:67430351..67430366,+!p10@SMAD3!0.72!4.23!SMAD3;;chr7:27213893..27213954,-!p1@HOXA10!0.72!4.23!HOXA10;;chr2:102091566..102091581,-!p1@RFX8!0.72!4.23!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.72!4.23!HOXD8;;chr3:21792631..21792665,-!p3@ZNF385D!0.72!4.23!ZNF385D;;chr14:62162258..62162269,+!p2@HIF1A!0.68!42.27!HIF1A;;chr6:31126291..31126399,+!p1@TCF19!0.68!41.42!TCF19;;chr17:46622070..46622109,-!p1@HOXB2!0.68!9.30!HOXB2;;chr14:62213758..62213774,+!p8@HIF1A!0.68!5.07!HIF1A;;chr11:47279504..47279563,+!p1@NR1H3!0.67!9.30!NR1H3;;chr12:3068957..3068978,+!p6@TEAD4!0.67!4.23!TEAD4;;chr8:72756667..72756736,-!p2@MSC!0.66!5.92!MSC;;chr1:212873267..212873332,-!p1@BATF3!0.66!5.07!BATF3;;chr8:128748308..128748324,+!p2@MYC!0.65!114.12!MYC;;chr5:92918919..92918942,+!p1@NR2F1!0.65!17.75!NR2F1;;chr5:92918894..92918912,+!p2@NR2F1!0.64!12.68!NR2F1;;chr1:158979872..158979898,+!p3@IFI16!0.64!11.83!IFI16;;chr3:12329358..12329393,+!p3@PPARG!0.64!9.30!PPARG;;chr2:102091514..102091528,-!p6@RFX8!0.64!3.38!RFX8;;chr2:223163706..223163730,-!p1@PAX3!0.64!3.38!PAX3;;chr4:174450089..174450153,-!p2@HAND2!0.64!3.38!HAND2;;chr7:15726243..15726293,-!p2@MEOX2!0.64!3.38!MEOX2;;chr7:27192185..27192209,-!p1@HOXA3!0.64!3.38!HOXA3;;chr11:46332679..46332695,+!p12@CREB3L1!0.64!3.38!CREB3L1;;chr12:54378923..54378966,+!p1@HOXC10!0.64!3.38!HOXC10;;chr12:54394059..54394088,+!p3@HOXC9!0.64!3.38!HOXC9;;chr12:85673977..85674015,+!p1@ALX1!0.64!3.38!ALX1;;chr14:95236440..95236465,-!p1@GSC!0.64!3.38!GSC;;chr17:46675558..46675577,-!p2@HOXB6!0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r3:44666503..44666516,+!p3@ZNF197!0.19!1.69!ZNF197;;chr4:206390..206444,+!p1@ZNF876P!0.19!1.69!ZNF876P;;chr22:39916289..39916302,+!p3@ATF4!0.19!0.85!ATF4;;chr3:141121369..141121392,+!p14@ZBTB38!0.19!0.85!ZBTB38;;chr3:75834722..75834733,-!p2@ZNF717!0.19!0.85!ZNF717;;chr17:42295777..42295816,-!p7@UBTF!0.19!0.85!UBTF;;chr5:92920256..92920282,+!p7@NR2F1!0.19!0.85!NR2F1;;chr6:135502501..135502546,+!p1@MYB!0.19!0.85!MYB;;chr6:15245797..15245818,+!p8@JARID2!0.19!0.85!JARID2;;chr6:45390599..45390662,+!p11@RUNX2!0.19!0.85!RUNX2;;chr7:99679381..99679392,-!p4@ZNF3!0.19!0.85!ZNF3;;chr8:128752850..128752874,+!p12@MYC!0.19!0.85!MYC;;chr8:81398511..81398523,+!p8@ZBTB10!0.19!0.85!ZBTB10;;chr10:3818891..3818895,-!p6@KLF6!0.19!0.85!KLF6;;chr10:97889754..97889765,+!p8@ZNF518A!0.19!0.85!ZNF518A;;chr11:120107344..120107351,+!p1@POU2F3!0.19!0.85!POU2F3;;chr12:66218003..66218018,+!p9@HMGA2!0.19!0.85!HMGA2;;chr19:50432132..50432217,+!p2@ATF5!0.19!0.85!ATF5;;chr19:58341656..58341694,+!p5@ZNF587!0.19!0.85!ZNF587;;chr1:93811637..93811648,+!p6@DR1!0.19!0.85!DR1;;chr20:62601309..62601320,-!p2@ZNF512B!0.19!0.85!ZNF512B;;chr22:41864662..41864708,-!p1@PHF5A!0.18!57.48!PHF5A;;chr17:40719102..40719141,+!p1@MLX!0.18!43.96!MLX;;chr10:135122380..135122458,+!p1@ZNF511!0.18!41.42!ZNF511;;chr19:3572925..3573014,+!p1@HMG20B!0.18!39.73!HMG20B;;chr2:27357479..27357524,-!p1@PREB!0.18!38.88!PREB;;chr20:62339381..62339428,+!p1@ZGPAT!0.18!21.13!ZGPAT;;chr6:35464817..35464894,-!p1@TEAD3!0.18!20.29!TEAD3;;chr12:124873852..124873881,-!p3@NCOR2!0.18!7.61!NCOR2;;chr9:35732561..35732587,+!p3@CREB3!0.18!5.07!CREB3;;chr19:52074502..52074587,+!p1@ZNF175!0.18!4.23!ZNF175;;chr10:105110890..105110914,-!p2@PCGF6!0.18!4.23!PCGF6;;chr12:72058060..72058101,+!p5@THAP2!0.18!2.54!THAP2;;chr14:35872453..35872485,-!p2@NFKBIA!0.18!2.54!NFKBIA;;chr15:96874244..96874259,+!p5@NR2F2!0.18!2.54!NR2F2;;chr1:61548069..61548102,+!p3@NFIA!0.18!2.54!NFIA;;chr20:3388207..3388236,-!p4@C20orf194!0.18!2.54!C20orf194;;chr1:247171347..247171366,-!p2@ZNF695!0.18!1.69!ZNF695;;chr18:3448455..3448480,+!p5@TGIF1!0.18!1.69!TGIF1;;chr18:3449821..3449860,+!p7@TGIF1!0.18!1.69!TGIF1;;chr15:37390374..37390422,-!p9@MEIS2!0.18!0.85!MEIS2;;chr16:86544113..86544145,+!p1@FOXF1!0.18!0.85!FOXF1;;chr17:17723702..17723721,-!p7@SREBF1!0.18!0.85!SREBF1;;chr10:97890311..97890324,+!p6@ZNF518A!0.18!0.85!ZNF518A;;chr11:19263192..19263222,-!p2@E2F8!0.18!0.85!E2F8;;chr12:57505581..57505598,-!p4@STAT6!0.18!0.85!STAT6;;chr14:74206359..74206374,-!p8@C14orf43!0.18!0.85!C14orf43;;chr3:126076242..126076257,-!p1@KLF15!0.18!0.85!KLF15;;chrX:70585978..70586012,+!p3@TAF1!0.18!0.85!TAF1;;chrX:152599653..152599662,+!p3@ZNF275!0.18!0.85!ZNF275;;chrX:129244499..129244506,-!p7@ELF4!0.18!0.85!ELF4;;chr1:211432784..211432796,+!p8@RCOR3!0.18!0.85!RCOR3;;chr1:6684918..6684936,+!p2@THAP3!0.18!0.85!THAP3;;chr7:17369649..17369664,+!p4@AHR!0.18!0.85!AHR;;chr8:72756023..72756055,-!p6@MSC!0.18!0.85!MSC;;chr1:93811438..93811548,+!p1@DR1!0.17!71.85!DR1;;chr10:60145155..60145206,+!p1@TFAM!0.17!58.33!TFAM;;chr14:75894714..75894733,+!p1@JDP2!0.17!37.19!JDP2;;chr19:45971246..45971265,+!p1@FOSB!0.17!24.51!FOSB;;chr1:61548225..61548299,+!p1@NFIA!0.17!16.91!NFIA;;chr22:38598086..38598105,+!p1@MAFF!0.17!13.52!MAFF;;chr9:73028814..73028895,-!p1@KLF9!0.17!12.68!KLF9;;chr3:39195075..39195088,-!p1@CSRNP1!0.17!7.61!CSRNP1;;chr6:43139041..43139094,+!p3@SRF!0.17!6.76!SRF;;chr6:134274322..134274342,+!p3@TBPL1!0.17!3.38!TBPL1;;chr7:148892581..148892604,+!p3@ZNF282!0.17!3.38!ZNF282;;chr1:164528384..164528409,+!p3@PBX1!0.17!3.38!PBX1;;chr19:45250948..45250998,+!p3@BCL3!0.17!2.54!BCL3;;chr19:58920102..58920149,+!p2@ZNF584!0.17!2.54!ZNF584;;chr20:49547731..49547753,-!p4@ADNP!0.17!2.54!ADNP;;chr18:51750928..51750942,-!p4@MBD2!0.17!2.54!MBD2;;chr9:14083467..14083483,-!p4@NFIB!0.17!2.54!NFIB;;chrX:48900782..48900793,-!p3@TFE3!0.17!1.69!TFE3;;chr11:695215..695231,-!p2@DEAF1!0.17!1.69!DEAF1;;chr11:9482521..9482533,+!p2@ZNF143!0.17!1.69!ZNF143;;chr8:42698494..42698507,-!p3@THAP1!0.17!1.69!THAP1;;chr19:11708311..11708332,+!p2@ZNF627!0.17!1.69!ZNF627;;chr19:22235279..22235301,+!p1@ZNF257!0.17!1.69!ZNF257;;chr2:74375058..74375069,-!p3@BOLA3!0.17!1.69!BOLA3;;chr3:39195139..39195150,-!p3@CSRNP1!0.17!0.85!CSRNP1;;chr1:67390715..67390733,+!p7@MIER1!0.17!0.85!MIER1;;chr19:31840438..31840470,-!p3@TSHZ3!0.17!0.85!TSHZ3;;chr6:106546808..106546833,+!p3@PRDM1!0.17!0.85!PRDM1;;chr6:42419290..42419314,-!p5@TRERF1!0.17!0.85!TRERF1;;chr7:14028743..14028799,-!p3@ETV1!0.17!0.85!ETV1;;chr7:44143997..44144008,+!p3@AEBP1!0.17!0.85!AEBP1;;chr8:106330696..106330719,+!p2@ZFPM2!0.17!0.85!ZFPM2;;chr8:145535378..145535420,+!p4@HSF1!0.17!0.85!HSF1;;chr8:102217817..102217936,-!p1@ZNF706!0.16!60.86!ZNF706;;chr6:134274354..134274371,+!p1@TBPL1!0.16!34.66!TBPL1;;chr15:31619013..31619095,+!p1@KLF13!0.16!30.43!KLF13;;chr2:70314849..70314860,+!p3@PCBP1!0.16!18.60!PCBP1;;chr7:148892653..148892729,+!p1@ZNF282!0.16!18.60!ZNF282;;chr19:3359591..3359667,+!p2@NFIC!0.16!14.37!NFIC;;chr11:65479702..65479731,+!p1@KA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 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002570
 +
|ffid_belonging_in_development=CL:0000134
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 67: Line 41:
 
|fonse_treatment=
 
|fonse_treatment=
 
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|fonse_treatment_closure=
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesenchymal%2520Stem%2520Cells%2520-%2520adipose%252c%2520donor3.CNhs12922.11698-123A6.hg19.nobarcode.bam
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesenchymal%2520Stem%2520Cells%2520-%2520adipose%252c%2520donor3.CNhs12922.11698-123A6.hg19.ctss.bed.gz
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesenchymal%2520Stem%2520Cells%2520-%2520adipose%252c%2520donor3.CNhs12922.11698-123A6.hg19.nobarcode.rdna.fa.gz
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mesenchymal%2520Stem%2520Cells%2520-%2520adipose%252c%2520donor3.CNhs12922.11698-123A6.hg38.nobarcode.bam
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mesenchymal%2520Stem%2520Cells%2520-%2520adipose%252c%2520donor3.CNhs12922.11698-123A6.hg38.nobarcode.ctss.bed.gz
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|id=FF:11698-123A6
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|is_a=EFO:0002091;;FF:0000096
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|is_obsolete=
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|library_id=CNhs12922
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|library_id_phase_based=2:CNhs12922
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11698
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11698
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|name=Mesenchymal Stem Cells - adipose, donor3
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|namespace=FANTOM5
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|profile_cagescan=,,,
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|profile_hcage=CNhs12922,LSID974,release012,COMPLETED
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|refex=http://refex.dbcls.jp/genelist.php?lang
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 +
|rna_box=123
 +
|rna_catalog_number=SC7515
 +
|rna_concentration=0.42
 +
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
 +
|rna_lot_number=2534
 +
|rna_od260/230=
 +
|rna_od260/280=
 +
|rna_position=A6
 +
|rna_rin=
 +
|rna_sample_type=total RNA
 +
|rna_tube_id=123A6
 +
|rna_weight_ug=10
 +
|sample_age=
 +
|sample_category=primary cells
 +
|sample_cell_catalog=
 +
|sample_cell_line=
 +
|sample_cell_lot=
 +
|sample_cell_type=mesenchymal stem cell
 +
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 +
|sample_company=Sciencell/3H
 +
|sample_description=
 +
|sample_dev_stage=
 +
|sample_disease=
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=
 +
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.97577724317605e-221!GO:0005737;cytoplasm;2.80467583361581e-190!GO:0043231;intracellular membrane-bound organelle;3.87910015606728e-174!GO:0043226;organelle;6.66765428020189e-174!GO:0043227;membrane-bound organelle;7.14866762941538e-174!GO:0043229;intracellular organelle;1.15084467623287e-173!GO:0044422;organelle part;1.98529764251368e-156!GO:0044446;intracellular organelle part;5.28166017681425e-155!GO:0044444;cytoplasmic part;7.08529796671178e-143!GO:0032991;macromolecular complex;1.17145422964817e-112!GO:0030529;ribonucleoprotein complex;1.37841071414277e-96!GO:0044237;cellular metabolic process;3.20099344713616e-82!GO:0005739;mitochondrion;6.39630800584344e-82!GO:0044238;primary metabolic process;9.49959602242138e-80!GO:0043233;organelle lumen;6.67716727719077e-79!GO:0031974;membrane-enclosed lumen;6.67716727719077e-79!GO:0005515;protein binding;9.26316182488561e-75!GO:0044428;nuclear part;1.87260770401586e-73!GO:0043170;macromolecule metabolic process;9.48567687965612e-72!GO:0003723;RNA binding;2.88183444663745e-68!GO:0005840;ribosome;1.03011069195222e-61!GO:0005634;nucleus;1.28806551098778e-58!GO:0006412;translation;8.59458891927085e-58!GO:0043234;protein complex;1.97669575994177e-56!GO:0044429;mitochondrial part;1.42486168200747e-54!GO:0003735;structural constituent of ribosome;1.54604018963153e-53!GO:0019538;protein metabolic process;4.39780898197671e-53!GO:0006396;RNA processing;1.68955378782092e-52!GO:0031090;organelle membrane;7.34226458278859e-52!GO:0009058;biosynthetic process;1.77655426499604e-50!GO:0044249;cellular biosynthetic process;1.48364709014856e-48!GO:0016043;cellular component organization and biogenesis;1.41626806794106e-47!GO:0044260;cellular macromolecule metabolic process;3.66488782664764e-47!GO:0044267;cellular protein metabolic process;6.10922704177688e-47!GO:0031967;organelle envelope;1.19214013365003e-46!GO:0031975;envelope;2.99368008111998e-46!GO:0009059;macromolecule biosynthetic process;6.61067157787304e-46!GO:0033279;ribosomal subunit;1.10266996877623e-45!GO:0031981;nuclear lumen;1.50767078106713e-42!GO:0005829;cytosol;2.77647886322277e-41!GO:0015031;protein transport;9.81831703210345e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.1863586373386e-38!GO:0043228;non-membrane-bound organelle;6.66352053569271e-38!GO:0043232;intracellular non-membrane-bound organelle;6.66352053569271e-38!GO:0033036;macromolecule localization;1.45258332362658e-37!GO:0065003;macromolecular complex assembly;4.17785948897372e-36!GO:0045184;establishment of protein localization;7.55651104080974e-36!GO:0016071;mRNA metabolic process;1.16618941944529e-35!GO:0008104;protein localization;9.48313774259538e-35!GO:0005740;mitochondrial envelope;9.83276882503057e-35!GO:0008380;RNA splicing;5.10206833011428e-34!GO:0006996;organelle organization and biogenesis;5.80472071833394e-34!GO:0043283;biopolymer metabolic process;6.89195795961985e-33!GO:0046907;intracellular transport;1.48398042442017e-32!GO:0031966;mitochondrial membrane;3.65746823580647e-32!GO:0006259;DNA metabolic process;4.28059310100889e-32!GO:0022607;cellular component assembly;5.34589808534686e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.40397511490003e-32!GO:0006397;mRNA processing;2.78617607066042e-31!GO:0019866;organelle inner membrane;3.23025009379148e-31!GO:0005743;mitochondrial inner membrane;1.2982944663286e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.49747028746764e-29!GO:0006886;intracellular protein transport;6.20209691503748e-28!GO:0010467;gene expression;1.29526196171313e-27!GO:0007049;cell cycle;3.94025165803847e-26!GO:0005681;spliceosome;5.07694884252155e-25!GO:0044445;cytosolic part;7.32103377798881e-25!GO:0015934;large ribosomal subunit;1.50096720639846e-24!GO:0031980;mitochondrial lumen;2.99998676645347e-24!GO:0005759;mitochondrial matrix;2.99998676645347e-24!GO:0005654;nucleoplasm;9.88812676038482e-24!GO:0044455;mitochondrial membrane part;2.40543221585914e-23!GO:0006119;oxidative phosphorylation;2.78689843726351e-23!GO:0000278;mitotic cell cycle;2.87507465173052e-22!GO:0015935;small ribosomal subunit;3.41878891479487e-22!GO:0006457;protein folding;3.49629081811157e-22!GO:0000166;nucleotide binding;5.38477427763709e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.42013133345629e-21!GO:0016462;pyrophosphatase activity;1.42013133345629e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;2.09683759312277e-21!GO:0022402;cell cycle process;2.91817865063945e-21!GO:0012505;endomembrane system;5.76894717731692e-21!GO:0005730;nucleolus;8.55554269237173e-21!GO:0017111;nucleoside-triphosphatase activity;2.06727374193247e-20!GO:0051649;establishment of cellular localization;6.42984655274827e-20!GO:0051641;cellular localization;7.69993473134471e-20!GO:0005783;endoplasmic reticulum;9.28009645894808e-20!GO:0022618;protein-RNA complex assembly;2.22987735327871e-19!GO:0042254;ribosome biogenesis and assembly;2.55469646622203e-19!GO:0005746;mitochondrial respiratory chain;7.76411127342487e-19!GO:0051186;cofactor metabolic process;8.55042841361906e-19!GO:0044451;nucleoplasm part;1.11819765299461e-18!GO:0005694;chromosome;2.00994013699268e-18!GO:0006974;response to DNA damage stimulus;2.72054386910845e-18!GO:0005761;mitochondrial ribosome;3.17514596473331e-18!GO:0000313;organellar ribosome;3.17514596473331e-18!GO:0000502;proteasome complex (sensu Eukaryota);7.1610533639516e-18!GO:0048770;pigment granule;1.2264869983196e-17!GO:0042470;melanosome;1.2264869983196e-17!GO:0044432;endoplasmic reticulum part;1.2264869983196e-17!GO:0000087;M phase of mitotic cell cycle;2.43318657861961e-17!GO:0044427;chromosomal part;2.53764900921461e-17!GO:0007067;mitosis;2.92195865587797e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.27079018030643e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.17457750252829e-16!GO:0022403;cell cycle phase;1.38274310190842e-16!GO:0008135;translation factor activity, nucleic acid binding;1.45952633509614e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.30534450286648e-16!GO:0003954;NADH dehydrogenase activity;4.30534450286648e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.30534450286648e-16!GO:0017076;purine nucleotide binding;4.67839517755508e-16!GO:0032553;ribonucleotide binding;1.0472311217423e-15!GO:0032555;purine ribonucleotide binding;1.0472311217423e-15!GO:0051082;unfolded protein binding;1.39037405311176e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.49187064306451e-15!GO:0043285;biopolymer catabolic process;2.50128109050757e-15!GO:0006281;DNA repair;2.78346048500557e-15!GO:0044265;cellular macromolecule catabolic process;1.01858217192613e-14!GO:0009057;macromolecule catabolic process;1.26263689117253e-14!GO:0006605;protein targeting;1.75601232872719e-14!GO:0006260;DNA replication;1.99554591832347e-14!GO:0016874;ligase activity;2.01708540754695e-14!GO:0006732;coenzyme metabolic process;2.11395507058347e-14!GO:0044248;cellular catabolic process;2.60116295581127e-14!GO:0042775;organelle ATP synthesis coupled electron transport;3.4512669715763e-14!GO:0042773;ATP synthesis coupled electron transport;3.4512669715763e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.46422639435714e-14!GO:0009719;response to endogenous stimulus;3.8454232313754e-14!GO:0030964;NADH dehydrogenase complex (quinone);4.61259938665736e-14!GO:0045271;respiratory chain complex I;4.61259938665736e-14!GO:0005747;mitochondrial respiratory chain complex I;4.61259938665736e-14!GO:0051301;cell division;5.56168652388574e-14!GO:0000279;M phase;6.53791750250442e-14!GO:0005794;Golgi apparatus;1.2253946537176e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.4682634269245e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.34804468369615e-13!GO:0000375;RNA splicing, via transesterification reactions;2.34804468369615e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.34804468369615e-13!GO:0006364;rRNA processing;2.4485132636029e-13!GO:0005524;ATP binding;3.5608890012129e-13!GO:0003743;translation initiation factor activity;3.92342088982016e-13!GO:0006413;translational initiation;4.48880612825224e-13!GO:0030554;adenyl nucleotide binding;4.68759903264043e-13!GO:0003676;nucleic acid binding;5.61847891296136e-13!GO:0008134;transcription factor binding;6.54804066396916e-13!GO:0032559;adenyl ribonucleotide binding;7.17588246443976e-13!GO:0065004;protein-DNA complex assembly;8.10705593703091e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;8.47662712132298e-13!GO:0016072;rRNA metabolic process;8.9706858703422e-13!GO:0030163;protein catabolic process;9.48850177911725e-13!GO:0005635;nuclear envelope;1.16971997864098e-12!GO:0051276;chromosome organization and biogenesis;1.17433202335977e-12!GO:0019941;modification-dependent protein catabolic process;1.33751926107412e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.33751926107412e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.50910973252624e-12!GO:0044257;cellular protein catabolic process;1.50910973252624e-12!GO:0006399;tRNA metabolic process;2.13019890433465e-12!GO:0006512;ubiquitin cycle;2.47588609751635e-12!GO:0048193;Golgi vesicle transport;3.04537278160024e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.04537278160024e-12!GO:0009055;electron carrier activity;6.7881044166599e-12!GO:0006334;nucleosome assembly;8.26032798032959e-12!GO:0005789;endoplasmic reticulum membrane;8.68900952003242e-12!GO:0005793;ER-Golgi intermediate compartment;9.2024604193843e-12!GO:0009259;ribonucleotide metabolic process;9.62512048963049e-12!GO:0044453;nuclear membrane part;1.20214651349197e-11!GO:0000074;regulation of progression through cell cycle;1.89426229375067e-11!GO:0016887;ATPase activity;1.89426229375067e-11!GO:0006333;chromatin assembly or disassembly;1.9657271548434e-11!GO:0051726;regulation of cell cycle;1.98057535649839e-11!GO:0042623;ATPase activity, coupled;2.56656851981918e-11!GO:0031965;nuclear membrane;2.81267880451029e-11!GO:0006163;purine nucleotide metabolic process;3.90259343726859e-11!GO:0000785;chromatin;4.31527242600288e-11!GO:0006446;regulation of translational initiation;8.12720515779852e-11!GO:0031497;chromatin assembly;9.69793219335898e-11!GO:0065002;intracellular protein transport across a membrane;1.24495170054535e-10!GO:0009260;ribonucleotide biosynthetic process;1.46195547144528e-10!GO:0043412;biopolymer modification;1.49010406932684e-10!GO:0009150;purine ribonucleotide metabolic process;1.84498571303751e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.95330041931393e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.18174205852092e-10!GO:0006164;purine nucleotide biosynthetic process;2.23217024163587e-10!GO:0005643;nuclear pore;6.510401108312e-10!GO:0006323;DNA packaging;6.95716258642865e-10!GO:0012501;programmed cell death;6.97066884879351e-10!GO:0006913;nucleocytoplasmic transport;9.11192663416133e-10!GO:0016491;oxidoreductase activity;1.03078154690292e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.04479951527875e-09!GO:0006915;apoptosis;1.29360217194581e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.60649752135309e-09!GO:0016604;nuclear body;1.87859866941502e-09!GO:0051188;cofactor biosynthetic process;1.96723434496514e-09!GO:0008565;protein transporter activity;2.03631242294519e-09!GO:0051169;nuclear transport;2.23675688958668e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42675027737843e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.51925378440744e-09!GO:0009141;nucleoside triphosphate metabolic process;3.03399235739838e-09!GO:0009117;nucleotide metabolic process;5.38567665881036e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.42834040701298e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.42834040701298e-09!GO:0006464;protein modification process;6.07395122662435e-09!GO:0016192;vesicle-mediated transport;6.21503411442292e-09!GO:0005788;endoplasmic reticulum lumen;6.97521390835128e-09!GO:0006461;protein complex assembly;8.23034004090861e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.23034004090861e-09!GO:0008219;cell death;8.23034004090861e-09!GO:0016265;death;8.23034004090861e-09!GO:0009060;aerobic respiration;1.20710798475321e-08!GO:0009056;catabolic process;1.29932923609074e-08!GO:0046930;pore complex;1.3107837970927e-08!GO:0003697;single-stranded DNA binding;1.32977043636633e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.4988593177257e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.4988593177257e-08!GO:0017038;protein import;1.7025247882032e-08!GO:0007005;mitochondrion organization and biogenesis;1.72147160552193e-08!GO:0015986;ATP synthesis coupled proton transport;2.00624621919513e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.00624621919513e-08!GO:0003712;transcription cofactor activity;2.11937464137795e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.43933285499241e-08!GO:0045333;cellular respiration;2.62368707871383e-08!GO:0004386;helicase activity;2.91514417855591e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.01350490232407e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.01350490232407e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.01350490232407e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.18708649896185e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.18708649896185e-08!GO:0046034;ATP metabolic process;3.91070039525134e-08!GO:0050657;nucleic acid transport;4.36771488008916e-08!GO:0051236;establishment of RNA localization;4.36771488008916e-08!GO:0050658;RNA transport;4.36771488008916e-08!GO:0006403;RNA localization;4.94275772943832e-08!GO:0051246;regulation of protein metabolic process;5.46275139967269e-08!GO:0043038;amino acid activation;5.50998605403887e-08!GO:0006418;tRNA aminoacylation for protein translation;5.50998605403887e-08!GO:0043039;tRNA aminoacylation;5.50998605403887e-08!GO:0016779;nucleotidyltransferase activity;5.93798309579351e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.29820226871714e-08!GO:0008026;ATP-dependent helicase activity;7.60852407199279e-08!GO:0019829;cation-transporting ATPase activity;7.83585589706078e-08!GO:0016070;RNA metabolic process;8.31355973325114e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.15934110234409e-07!GO:0043566;structure-specific DNA binding;1.16471742631051e-07!GO:0016787;hydrolase activity;1.29194730745377e-07!GO:0016853;isomerase activity;1.48508443953355e-07!GO:0000786;nucleosome;1.62135132900369e-07!GO:0015630;microtubule cytoskeleton;1.69924904404457e-07!GO:0006754;ATP biosynthetic process;2.04691545004062e-07!GO:0006753;nucleoside phosphate metabolic process;2.04691545004062e-07!GO:0005819;spindle;2.05152320592941e-07!GO:0006366;transcription from RNA polymerase II promoter;2.10844793744617e-07!GO:0008639;small protein conjugating enzyme activity;2.19933041686047e-07!GO:0048523;negative regulation of cellular process;2.23946784548853e-07!GO:0016740;transferase activity;2.56577110715943e-07!GO:0043687;post-translational protein modification;3.22644675274493e-07!GO:0006261;DNA-dependent DNA replication;3.92238954092585e-07!GO:0009108;coenzyme biosynthetic process;4.00268112511593e-07!GO:0051187;cofactor catabolic process;4.57786995765328e-07!GO:0019787;small conjugating protein ligase activity;4.63954872313261e-07!GO:0005762;mitochondrial large ribosomal subunit;4.78224687493249e-07!GO:0000315;organellar large ribosomal subunit;4.78224687493249e-07!GO:0004842;ubiquitin-protein ligase activity;4.80023682249548e-07!GO:0016607;nuclear speck;4.87328768837178e-07!GO:0006099;tricarboxylic acid cycle;5.31465853236783e-07!GO:0046356;acetyl-CoA catabolic process;5.31465853236783e-07!GO:0045259;proton-transporting ATP synthase complex;6.93434718524073e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.00011788004587e-07!GO:0006091;generation of precursor metabolites and energy;7.3714386931363e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.87503462274385e-07!GO:0006084;acetyl-CoA metabolic process;7.91954365828548e-07!GO:0030120;vesicle coat;7.96832344319461e-07!GO:0030662;coated vesicle membrane;7.96832344319461e-07!GO:0003924;GTPase activity;8.44923870303962e-07!GO:0004298;threonine endopeptidase activity;1.06481813584848e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.10628741383267e-06!GO:0051329;interphase of mitotic cell cycle;1.16128758742662e-06!GO:0009109;coenzyme catabolic process;1.67651088963044e-06!GO:0051028;mRNA transport;1.82257400672752e-06!GO:0006950;response to stress;2.03155589705095e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.43206194524952e-06!GO:0006752;group transfer coenzyme metabolic process;2.62851232220788e-06!GO:0016881;acid-amino acid ligase activity;3.2308207840616e-06!GO:0003899;DNA-directed RNA polymerase activity;3.23584551440012e-06!GO:0005813;centrosome;3.30387083510485e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.32450328682157e-06!GO:0044431;Golgi apparatus part;3.4015670958094e-06!GO:0051325;interphase;4.01102337458583e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.19676983286014e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.29722086175892e-06!GO:0016859;cis-trans isomerase activity;5.15142719523332e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.3103662660225e-06!GO:0048519;negative regulation of biological process;6.06793082890325e-06!GO:0000245;spliceosome assembly;6.83056557252648e-06!GO:0000775;chromosome, pericentric region;6.92300952326232e-06!GO:0048475;coated membrane;7.45057041525737e-06!GO:0030117;membrane coat;7.45057041525737e-06!GO:0005815;microtubule organizing center;7.95848117014958e-06!GO:0005667;transcription factor complex;9.75797260478465e-06!GO:0009165;nucleotide biosynthetic process;1.10366176793068e-05!GO:0042981;regulation of apoptosis;1.19919567875186e-05!GO:0000314;organellar small ribosomal subunit;1.22663033009804e-05!GO:0005763;mitochondrial small ribosomal subunit;1.22663033009804e-05!GO:0005525;GTP binding;1.37921320158159e-05!GO:0007051;spindle organization and biogenesis;1.40924436652044e-05!GO:0008654;phospholipid biosynthetic process;1.40924436652044e-05!GO:0043067;regulation of programmed cell death;1.48958553326362e-05!GO:0045454;cell redox homeostasis;1.48958553326362e-05!GO:0008033;tRNA processing;1.58718065158529e-05!GO:0006613;cotranslational protein targeting to membrane;1.63167691666315e-05!GO:0043069;negative regulation of programmed cell death;1.6805412012759e-05!GO:0006793;phosphorus metabolic process;2.03839679901408e-05!GO:0006796;phosphate metabolic process;2.03839679901408e-05!GO:0043066;negative regulation of apoptosis;2.07102018021657e-05!GO:0051170;nuclear import;2.25974751362427e-05!GO:0031252;leading edge;2.67485772852443e-05!GO:0005768;endosome;2.80867741719679e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.19466379902735e-05!GO:0043623;cellular protein complex assembly;3.48281471583247e-05!GO:0000075;cell cycle checkpoint;4.28439705215658e-05!GO:0032446;protein modification by small protein conjugation;4.35355183964755e-05!GO:0003724;RNA helicase activity;4.42465334892241e-05!GO:0005657;replication fork;5.29630250858375e-05!GO:0016567;protein ubiquitination;5.61802393285154e-05!GO:0016310;phosphorylation;5.62401824108732e-05!GO:0006606;protein import into nucleus;5.63319420539838e-05!GO:0044452;nucleolar part;5.7109891614624e-05!GO:0006916;anti-apoptosis;5.82264646990152e-05!GO:0000139;Golgi membrane;5.82264646990152e-05!GO:0043681;protein import into mitochondrion;6.2952468691585e-05!GO:0043021;ribonucleoprotein binding;6.42794225097986e-05!GO:0016023;cytoplasmic membrane-bound vesicle;6.45117497227795e-05!GO:0005770;late endosome;6.95046834695383e-05!GO:0030867;rough endoplasmic reticulum membrane;6.9853078217831e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.9853078217831e-05!GO:0006626;protein targeting to mitochondrion;6.9853078217831e-05!GO:0031988;membrane-bound vesicle;7.56211735240067e-05!GO:0008361;regulation of cell size;8.3559523217139e-05!GO:0003714;transcription corepressor activity;0.000100257901387639!GO:0033116;ER-Golgi intermediate compartment membrane;0.000103939964604888!GO:0016049;cell growth;0.000105269357489862!GO:0001558;regulation of cell growth;0.000111106521203427!GO:0051087;chaperone binding;0.000114338956149688!GO:0031968;organelle outer membrane;0.000114478954379328!GO:0045786;negative regulation of progression through cell cycle;0.000124454065880806!GO:0031324;negative regulation of cellular metabolic process;0.000129284948604329!GO:0032561;guanyl ribonucleotide binding;0.000143180896227309!GO:0019001;guanyl nucleotide binding;0.000143180896227309!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000144613503957916!GO:0019867;outer membrane;0.000158189879170922!GO:0006612;protein targeting to membrane;0.000191635237333048!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00019766896460466!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000205145394444803!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000208668897299992!GO:0005798;Golgi-associated vesicle;0.000215161693795073!GO:0044440;endosomal part;0.000217630646693702!GO:0010008;endosome membrane;0.000217630646693702!GO:0000151;ubiquitin ligase complex;0.000217947900038831!GO:0042802;identical protein binding;0.000252526365402583!GO:0051052;regulation of DNA metabolic process;0.000260938800965634!GO:0051427;hormone receptor binding;0.000261369401319133!GO:0031072;heat shock protein binding;0.000280987607552197!GO:0007088;regulation of mitosis;0.000308123327423559!GO:0005885;Arp2/3 protein complex;0.000308123327423559!GO:0005741;mitochondrial outer membrane;0.000323460571684624!GO:0005048;signal sequence binding;0.000330593746786656!GO:0003684;damaged DNA binding;0.000340057072384968!GO:0004527;exonuclease activity;0.000350684122890497!GO:0008094;DNA-dependent ATPase activity;0.000353620897611309!GO:0016564;transcription repressor activity;0.000360068291506776!GO:0048522;positive regulation of cellular process;0.0003609058343133!GO:0008250;oligosaccharyl transferase complex;0.000369625660470463!GO:0005791;rough endoplasmic reticulum;0.000408275855861458!GO:0006839;mitochondrial transport;0.000408275855861458!GO:0051789;response to protein stimulus;0.000412928223828141!GO:0006986;response to unfolded protein;0.000412928223828141!GO:0005773;vacuole;0.000424495672900271!GO:0004576;oligosaccharyl transferase activity;0.000427420363904614!GO:0015980;energy derivation by oxidation of organic compounds;0.000428089476509047!GO:0016563;transcription activator activity;0.000443767357258963!GO:0006302;double-strand break repair;0.000452826035978448!GO:0003713;transcription coactivator activity;0.000458215043664564!GO:0030133;transport vesicle;0.00045883625701529!GO:0030880;RNA polymerase complex;0.000467127927573259!GO:0008168;methyltransferase activity;0.000480758487572691!GO:0019752;carboxylic acid metabolic process;0.000487551444718478!GO:0006082;organic acid metabolic process;0.000489282139650272!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000489282139650272!GO:0015399;primary active transmembrane transporter activity;0.000489282139650272!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000497053995991178!GO:0016741;transferase activity, transferring one-carbon groups;0.000511941054970771!GO:0019843;rRNA binding;0.000513450367631729!GO:0035257;nuclear hormone receptor binding;0.000526310198358112!GO:0016568;chromatin modification;0.000549920994692107!GO:0007006;mitochondrial membrane organization and biogenesis;0.000564207556861278!GO:0046474;glycerophospholipid biosynthetic process;0.000574714757449679!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000576165331247839!GO:0051168;nuclear export;0.000579563175335511!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000583313997877613!GO:0031982;vesicle;0.000588339704774268!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000614738911277989!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000616512204123931!GO:0031410;cytoplasmic vesicle;0.000618447844052975!GO:0046483;heterocycle metabolic process;0.000629682710256461!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000665903021142839!GO:0008186;RNA-dependent ATPase activity;0.000684203419824638!GO:0044262;cellular carbohydrate metabolic process;0.000787217965037822!GO:0000059;protein import into nucleus, docking;0.000829737011541254!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000855143300051499!GO:0005769;early endosome;0.000857974569924177!GO:0009892;negative regulation of metabolic process;0.0009812017050951!GO:0051920;peroxiredoxin activity;0.000990703968348908!GO:0005905;coated pit;0.00106804796447669!GO:0019899;enzyme binding;0.00107025768562286!GO:0006414;translational elongation;0.00107119891523506!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00109168054084877!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00109168054084877!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00109168054084877!GO:0007010;cytoskeleton organization and biogenesis;0.00113234081192693!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0011699106509437!GO:0000428;DNA-directed RNA polymerase complex;0.0011699106509437!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00118024185767728!GO:0015002;heme-copper terminal oxidase activity;0.00118024185767728!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00118024185767728!GO:0004129;cytochrome-c oxidase activity;0.00118024185767728!GO:0003729;mRNA binding;0.00118126589916502!GO:0006275;regulation of DNA replication;0.00119217522347199!GO:0018196;peptidyl-asparagine modification;0.00119217522347199!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00119217522347199!GO:0006383;transcription from RNA polymerase III promoter;0.00122523523853649!GO:0004518;nuclease activity;0.00129580758836932!GO:0003678;DNA helicase activity;0.00144320506971378!GO:0008610;lipid biosynthetic process;0.00153660168930598!GO:0000082;G1/S transition of mitotic cell cycle;0.00154212698117828!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00155103375319781!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00155103375319781!GO:0050662;coenzyme binding;0.00156098270877068!GO:0016126;sterol biosynthetic process;0.00157121794081237!GO:0030663;COPI coated vesicle membrane;0.00167022547583883!GO:0030126;COPI vesicle coat;0.00167022547583883!GO:0003690;double-stranded DNA binding;0.00170396955557465!GO:0005684;U2-dependent spliceosome;0.00170731279965645!GO:0004004;ATP-dependent RNA helicase activity;0.00173262318842238!GO:0032508;DNA duplex unwinding;0.00173262318842238!GO:0032392;DNA geometric change;0.00173262318842238!GO:0006118;electron transport;0.00174748010164038!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00180382410772351!GO:0046467;membrane lipid biosynthetic process;0.00183148854317909!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00185236149080222!GO:0051252;regulation of RNA metabolic process;0.00192403938615898!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00192403938615898!GO:0006778;porphyrin metabolic process;0.0020151728402007!GO:0033013;tetrapyrrole metabolic process;0.0020151728402007!GO:0000776;kinetochore;0.00212642086487391!GO:0000178;exosome (RNase complex);0.00219856231767128!GO:0043488;regulation of mRNA stability;0.00244975339525595!GO:0043487;regulation of RNA stability;0.00244975339525595!GO:0030036;actin cytoskeleton organization and biogenesis;0.00248293187764762!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00248293187764762!GO:0048500;signal recognition particle;0.00249623173375541!GO:0016363;nuclear matrix;0.00249795971910425!GO:0007093;mitotic cell cycle checkpoint;0.00250416536206211!GO:0000323;lytic vacuole;0.00250416536206211!GO:0005764;lysosome;0.00250416536206211!GO:0000049;tRNA binding;0.00250416536206211!GO:0007346;regulation of progression through mitotic cell cycle;0.00257671478754977!GO:0065009;regulation of a molecular function;0.00260609027896805!GO:0006268;DNA unwinding during replication;0.00272411006428858!GO:0008180;signalosome;0.00272863423396121!GO:0008312;7S RNA binding;0.00290555204046702!GO:0005758;mitochondrial intermembrane space;0.00291382899437359!GO:0009116;nucleoside metabolic process;0.00293189964553334!GO:0015631;tubulin binding;0.00293189964553334!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00313250086310218!GO:0006310;DNA recombination;0.00321714244734787!GO:0006595;polyamine metabolic process;0.0032793529623518!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00338376155980716!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00338376155980716!GO:0015992;proton transport;0.00341983781407602!GO:0006520;amino acid metabolic process;0.00356287340351003!GO:0048144;fibroblast proliferation;0.00374562484646958!GO:0048145;regulation of fibroblast proliferation;0.00374562484646958!GO:0043284;biopolymer biosynthetic process;0.00389223044325053!GO:0030176;integral to endoplasmic reticulum membrane;0.00413555173326585!GO:0006352;transcription initiation;0.00420201131792662!GO:0031970;organelle envelope lumen;0.00422321726131304!GO:0006818;hydrogen transport;0.0043193060887667!GO:0006402;mRNA catabolic process;0.00436393391025199!GO:0009451;RNA modification;0.00444740060069051!GO:0006740;NADPH regeneration;0.00447043850662475!GO:0006098;pentose-phosphate shunt;0.00447043850662475!GO:0046489;phosphoinositide biosynthetic process;0.00452132499154325!GO:0030137;COPI-coated vesicle;0.00464781936742855!GO:0007052;mitotic spindle organization and biogenesis;0.00469036385278298!GO:0009112;nucleobase metabolic process;0.00480799963320237!GO:0030134;ER to Golgi transport vesicle;0.00497209064193523!GO:0040008;regulation of growth;0.00503595582982255!GO:0051287;NAD binding;0.00509632088812155!GO:0022890;inorganic cation transmembrane transporter activity;0.00524788666468634!GO:0030127;COPII vesicle coat;0.00531516364094112!GO:0012507;ER to Golgi transport vesicle membrane;0.00531516364094112!GO:0016044;membrane organization and biogenesis;0.00541163075584197!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00554910188277507!GO:0045047;protein targeting to ER;0.00554910188277507!GO:0048146;positive regulation of fibroblast proliferation;0.00557264161260378!GO:0006979;response to oxidative stress;0.00572445553439385!GO:0008408;3'-5' exonuclease activity;0.00587102402934653!GO:0003746;translation elongation factor activity;0.00598799210385345!GO:0043492;ATPase activity, coupled to movement of substances;0.00599003868055301!GO:0006401;RNA catabolic process;0.00624445785037183!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00645118259639659!GO:0046870;cadmium ion binding;0.00645118259639659!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00650309136378233!GO:0016272;prefoldin complex;0.00654277980668027!GO:0043022;ribosome binding;0.00701155425227499!GO:0008139;nuclear localization sequence binding;0.00718269324987669!GO:0042168;heme metabolic process;0.00732707731536235!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00742470351068804!GO:0006695;cholesterol biosynthetic process;0.00751999656325975!GO:0048487;beta-tubulin binding;0.00756995643676112!GO:0004532;exoribonuclease activity;0.00756995643676112!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00756995643676112!GO:0006779;porphyrin biosynthetic process;0.00780512234497566!GO:0033014;tetrapyrrole biosynthetic process;0.00780512234497566!GO:0008632;apoptotic program;0.00781018490078397!GO:0050794;regulation of cellular process;0.00815802972500617!GO:0030132;clathrin coat of coated pit;0.00827620563958853!GO:0008320;protein transmembrane transporter activity;0.00831114207581435!GO:0007243;protein kinase cascade;0.0083853604307895!GO:0017166;vinculin binding;0.00884037835313978!GO:0048518;positive regulation of biological process;0.00893253804154508!GO:0004177;aminopeptidase activity;0.00893870903651917!GO:0007059;chromosome segregation;0.00909836815884924!GO:0006891;intra-Golgi vesicle-mediated transport;0.00931837214594341!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00946919005580675!GO:0008283;cell proliferation;0.00956338821926602!GO:0016481;negative regulation of transcription;0.00966616032857724!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00973271893240582!GO:0051539;4 iron, 4 sulfur cluster binding;0.0101443835413922!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0103215841426705!GO:0005832;chaperonin-containing T-complex;0.010924256910142!GO:0030658;transport vesicle membrane;0.0112128950181174!GO:0006417;regulation of translation;0.011288704729737!GO:0006144;purine base metabolic process;0.0116131409497886!GO:0006611;protein export from nucleus;0.0117639366283487!GO:0030029;actin filament-based process;0.0118283319859819!GO:0030027;lamellipodium;0.0118283319859819!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0118283319859819!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.011887228160195!GO:0035258;steroid hormone receptor binding;0.0120445420876782!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0123236057217154!GO:0009124;nucleoside monophosphate biosynthetic process;0.0124751150280482!GO:0009123;nucleoside monophosphate metabolic process;0.0124751150280482!GO:0004003;ATP-dependent DNA helicase activity;0.0130835378118693!GO:0030145;manganese ion binding;0.0131361260365184!GO:0007050;cell cycle arrest;0.0136167261437768!GO:0005862;muscle thin filament tropomyosin;0.0143676636397308!GO:0015036;disulfide oxidoreductase activity;0.0144977285125054!GO:0016251;general RNA polymerase II transcription factor activity;0.0145053418136059!GO:0051540;metal cluster binding;0.0146661864702711!GO:0051536;iron-sulfur cluster binding;0.0146661864702711!GO:0031124;mRNA 3'-end processing;0.0152470157750238!GO:0006405;RNA export from nucleus;0.0152670237102956!GO:0006790;sulfur metabolic process;0.0158977002921085!GO:0000096;sulfur amino acid metabolic process;0.0161514784551388!GO:0030521;androgen receptor signaling pathway;0.0162630259679927!GO:0003682;chromatin binding;0.0162630259679927!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0164363455639646!GO:0016860;intramolecular oxidoreductase activity;0.0164363455639646!GO:0006733;oxidoreduction coenzyme metabolic process;0.0164363455639646!GO:0048037;cofactor binding;0.0165708752000935!GO:0005874;microtubule;0.0168715855413711!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0172683323126258!GO:0000922;spindle pole;0.0173371420190642!GO:0043596;nuclear replication fork;0.0173371420190642!GO:0008538;proteasome activator activity;0.017626687406493!GO:0030833;regulation of actin filament polymerization;0.0177946826876512!GO:0005637;nuclear inner membrane;0.0179875958425546!GO:0005876;spindle microtubule;0.0180324267872561!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0182510066142862!GO:0045039;protein import into mitochondrial inner membrane;0.0182510066142862!GO:0048471;perinuclear region of cytoplasm;0.0188047257429925!GO:0005869;dynactin complex;0.0192644556895217!GO:0008637;apoptotic mitochondrial changes;0.019274600216022!GO:0000175;3'-5'-exoribonuclease activity;0.0193552537657096!GO:0006284;base-excision repair;0.0196540794381004!GO:0009967;positive regulation of signal transduction;0.0199670884050126!GO:0001726;ruffle;0.0199842166135465!GO:0006007;glucose catabolic process;0.0200820166599913!GO:0009303;rRNA transcription;0.0201169409934055!GO:0031529;ruffle organization and biogenesis;0.0203533550429377!GO:0006650;glycerophospholipid metabolic process;0.0203782674378316!GO:0007021;tubulin folding;0.0205115461804931!GO:0006506;GPI anchor biosynthetic process;0.0208149734057339!GO:0033673;negative regulation of kinase activity;0.0213242722551918!GO:0006469;negative regulation of protein kinase activity;0.0213242722551918!GO:0051348;negative regulation of transferase activity;0.0213811822277742!GO:0006739;NADP metabolic process;0.0217105377696312!GO:0003756;protein disulfide isomerase activity;0.0218697634792489!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0218697634792489!GO:0000910;cytokinesis;0.0218697634792489!GO:0031371;ubiquitin conjugating enzyme complex;0.0219266254500963!GO:0022415;viral reproductive process;0.0225008435268535!GO:0000339;RNA cap binding;0.0225279570824074!GO:0019206;nucleoside kinase activity;0.0226552880701451!GO:0030041;actin filament polymerization;0.0231985063583343!GO:0016584;nucleosome positioning;0.0237118480993922!GO:0045792;negative regulation of cell size;0.0237591138853653!GO:0042770;DNA damage response, signal transduction;0.0238212979020413!GO:0030660;Golgi-associated vesicle membrane;0.0238628663816461!GO:0009161;ribonucleoside monophosphate metabolic process;0.0242452810964195!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0242452810964195!GO:0030308;negative regulation of cell growth;0.0245121124220181!GO:0022408;negative regulation of cell-cell adhesion;0.024683772921219!GO:0031418;L-ascorbic acid binding;0.0247857086655149!GO:0030032;lamellipodium biogenesis;0.0251398204357152!GO:0006518;peptide metabolic process;0.0251500614714776!GO:0008022;protein C-terminus binding;0.0251500614714776!GO:0031326;regulation of cellular biosynthetic process;0.0251908752184405!GO:0006807;nitrogen compound metabolic process;0.0253076455038806!GO:0008047;enzyme activator activity;0.0255378252906867!GO:0006220;pyrimidine nucleotide metabolic process;0.0264216924816599!GO:0006289;nucleotide-excision repair;0.0264268642955439!GO:0005669;transcription factor TFIID complex;0.0264420679413024!GO:0006783;heme biosynthetic process;0.0267057115585291!GO:0008092;cytoskeletal protein binding;0.0267144182698542!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0269622494954863!GO:0009119;ribonucleoside metabolic process;0.0270912285584176!GO:0009889;regulation of biosynthetic process;0.0271492112289055!GO:0022884;macromolecule transmembrane transporter activity;0.0271760243170409!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0271760243170409!GO:0046128;purine ribonucleoside metabolic process;0.0272537257291743!GO:0042278;purine nucleoside metabolic process;0.0272537257291743!GO:0006505;GPI anchor metabolic process;0.0280495362369168!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0283643519370145!GO:0010257;NADH dehydrogenase complex assembly;0.0283643519370145!GO:0033108;mitochondrial respiratory chain complex assembly;0.0283643519370145!GO:0050790;regulation of catalytic activity;0.0283795567431229!GO:0030508;thiol-disulfide exchange intermediate activity;0.028723713714014!GO:0051270;regulation of cell motility;0.0287863745144509!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0288979363743702!GO:0005732;small nucleolar ribonucleoprotein complex;0.0292737448199146!GO:0031902;late endosome membrane;0.029276460058047!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0298390435732967!GO:0051101;regulation of DNA binding;0.0300379294230463!GO:0031272;regulation of pseudopodium formation;0.0300379294230463!GO:0031269;pseudopodium formation;0.0300379294230463!GO:0031344;regulation of cell projection organization and biogenesis;0.0300379294230463!GO:0031268;pseudopodium organization and biogenesis;0.0300379294230463!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0300379294230463!GO:0031274;positive regulation of pseudopodium formation;0.0300379294230463!GO:0030659;cytoplasmic vesicle membrane;0.0300463144147054!GO:0031570;DNA integrity checkpoint;0.0300463144147054!GO:0000725;recombinational repair;0.0301919812059881!GO:0000724;double-strand break repair via homologous recombination;0.0301919812059881!GO:0003711;transcription elongation regulator activity;0.0307584077988846!GO:0006497;protein amino acid lipidation;0.031561959989451!GO:0000287;magnesium ion binding;0.0315631680296609!GO:0043189;H4/H2A histone acetyltransferase complex;0.0317189548256541!GO:0031901;early endosome membrane;0.0317617670862441!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0319712939617202!GO:0004540;ribonuclease activity;0.0320346151103918!GO:0006509;membrane protein ectodomain proteolysis;0.0328502509287511!GO:0033619;membrane protein proteolysis;0.0328502509287511!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0331365763743675!GO:0006378;mRNA polyadenylation;0.0337375764137135!GO:0000209;protein polyubiquitination;0.0340012505685273!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0340012505685273!GO:0035267;NuA4 histone acetyltransferase complex;0.0341318728031503!GO:0009308;amine metabolic process;0.0342787508497187!GO:0030118;clathrin coat;0.0345771849819439!GO:0042158;lipoprotein biosynthetic process;0.0350845999990938!GO:0033559;unsaturated fatty acid metabolic process;0.0355124555515296!GO:0006636;unsaturated fatty acid biosynthetic process;0.0355124555515296!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0357126684078628!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0358493515539332!GO:0031589;cell-substrate adhesion;0.0360194924159208!GO:0030911;TPR domain binding;0.0362622233855115!GO:0005583;fibrillar collagen;0.0369586407360376!GO:0032984;macromolecular complex disassembly;0.0369603794248533!GO:0043086;negative regulation of catalytic activity;0.0370862462379886!GO:0007040;lysosome organization and biogenesis;0.0371653620476186!GO:0006730;one-carbon compound metabolic process;0.0372062030265585!GO:0048468;cell development;0.0378967917800428!GO:0005801;cis-Golgi network;0.0381799392774072!GO:0046519;sphingoid metabolic process;0.0385359910268896!GO:0031625;ubiquitin protein ligase binding;0.0389508294272638!GO:0032259;methylation;0.0389608094327218!GO:0006596;polyamine biosynthetic process;0.0390092310251109!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0392232975548616!GO:0042393;histone binding;0.0394067857617422!GO:0001952;regulation of cell-matrix adhesion;0.0411770352042999!GO:0005092;GDP-dissociation inhibitor activity;0.0414121663489789!GO:0004674;protein serine/threonine kinase activity;0.0415499366585625!GO:0050178;phenylpyruvate tautomerase activity;0.0416224527935709!GO:0009003;signal peptidase activity;0.0416224527935709!GO:0016407;acetyltransferase activity;0.041836147085125!GO:0043414;biopolymer methylation;0.0426407675919642!GO:0048660;regulation of smooth muscle cell proliferation;0.0429505039373959!GO:0006360;transcription from RNA polymerase I promoter;0.04306007310042!GO:0051128;regulation of cellular component organization and biogenesis;0.0430793199675441!GO:0016197;endosome transport;0.0430793199675441!GO:0006769;nicotinamide metabolic process;0.0435090112275027!GO:0000781;chromosome, telomeric region;0.0442020803766686!GO:0043601;nuclear replisome;0.0445429919346811!GO:0030894;replisome;0.0445429919346811!GO:0051098;regulation of binding;0.0450917167975526!GO:0007569;cell aging;0.0460111914814756!GO:0005588;collagen type V;0.0460538048087324!GO:0007017;microtubule-based process;0.0460538048087324!GO:0016408;C-acyltransferase activity;0.0468209977878062!GO:0030503;regulation of cell redox homeostasis;0.047069088230695!GO:0030518;steroid hormone receptor signaling pathway;0.0470795775888703!GO:0006400;tRNA modification;0.0471606253354149!GO:0008629;induction of apoptosis by intracellular signals;0.0472644938602057!GO:0050811;GABA receptor binding;0.0475567063991311!GO:0035035;histone acetyltransferase binding;0.0478906099138569!GO:0007034;vacuolar transport;0.0479372741613866!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0483112249968123!GO:0008652;amino acid biosynthetic process;0.0484712468730916!GO:0008537;proteasome activator complex;0.0485621260094736!GO:0000084;S phase of mitotic cell cycle;0.048564857404085!GO:0004526;ribonuclease P activity;0.0486451878669212!GO:0006270;DNA replication initiation;0.0486451878669212!GO:0004549;tRNA-specific ribonuclease activity;0.0491969091757705!GO:0006892;post-Golgi vesicle-mediated transport;0.0491969091757705!GO:0046426;negative regulation of JAK-STAT cascade;0.0491969091757705!GO:0004197;cysteine-type endopeptidase activity;0.0498848116600232!GO:0008147;structural constituent of bone;0.0499294328936226
 +
|sample_id=11698
 +
|sample_note=
 +
|sample_sex=
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=adipose tissue
 +
|top_motifs=ALX4:1.76304837054;HES1:1.41889485501;POU3F1..4:1.30873225478;UFEwm:1.22245084978;GLI1..3:1.19705964269;NFE2L1:1.17819485346;NR6A1:1.06819759088;SPZ1:1.01784691092;EN1,2:1.0082835706;HOX{A4,D4}:1.0056630391;PAX1,9:0.993320476498;NR3C1:0.966898992511;GFI1B:0.955294629486;AIRE:0.946901958361;NKX3-1:0.865765266382;ZNF238:0.856006943772;PAX8:0.855687105305;MYBL2:0.84340068716;HSF1,2:0.779071211969;ZNF384:0.725077416787;IKZF1:0.687237331602;TEF:0.68603949415;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.684755252075;HOX{A5,B5}:0.658775848844;AR:0.654836119781;LHX3,4:0.648546173807;ZNF423:0.641235262403;FOXL1:0.600630035325;NKX2-1,4:0.554989326729;NANOG{mouse}:0.548169606101;TOPORS:0.539285060265;YY1:0.534652438638;HOX{A6,A7,B6,B7}:0.528910447315;E2F1..5:0.521333305971;HOXA9_MEIS1:0.490534035038;NR5A1,2:0.487512686979;TBP:0.457657429354;FOXD3:0.44918672733;POU2F1..3:0.444254285827;TAL1_TCF{3,4,12}:0.434757919582;GATA4:0.411579059989;PBX1:0.399681581442;ESRRA:0.366637671357;SRF:0.351455608764;TFDP1:0.342863508156;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.329085362009;NKX2-2,8:0.327257266043;PPARG:0.322330682123;CDX1,2,4:0.30043831283;TFCP2:0.300144270987;MYB:0.298395208665;SOX17:0.296674597742;ESR1:0.295568870485;NKX3-2:0.294715465927;HBP1_HMGB_SSRP1_UBTF:0.251841880957;POU6F1:0.240937663897;HAND1,2:0.240158469099;ZBTB16:0.218575492166;EVI1:0.216385848026;RXR{A,B,G}:0.203733270312;KLF4:0.200602944808;TFAP4:0.182742977053;TLX1..3_NFIC{dimer}:0.182555844712;BACH2:0.165256813093;GFI1:0.158382414053;STAT5{A,B}:0.156777722894;TEAD1:0.150830128297;ALX1:0.148470655123;NFATC1..3:0.117121221081;GTF2A1,2:0.116641301352;EBF1:0.102817033048;ZIC1..3:0.075661430897;FOS_FOS{B,L1}_JUN{B,D}:0.0739613825564;LEF1_TCF7_TCF7L1,2:0.0521586602382;TP53:0.044035992723;STAT2,4,6:0.0420110740681;HNF1A:0.0405161711711;AHR_ARNT_ARNT2:0.012509175769;GZF1:0.00887459935394;SOX5:0.00780637738396;NKX2-3_NKX2-5:0.000997663993296;NFE2L2:-0.0183513974536;HMX1:-0.0193758978274;POU1F1:-0.0303187319821;ONECUT1,2:-0.0306385193387;MTF1:-0.0393668039081;PRDM1:-0.0606497830435;MAFB:-0.0680064739451;NFIX:-0.0839474173903;ATF6:-0.0939398644668;SMAD1..7,9:-0.10021349384;bHLH_family:-0.123682331551;HLF:-0.133459796681;RXRA_VDR{dimer}:-0.14375653976;RBPJ:-0.145033896014;ZNF143:-0.146033723805;XBP1:-0.16723096819;NFE2:-0.168195427099;XCPE1{core}:-0.174536400003;T:-0.179489805318;PAX4:-0.187768578819;GTF2I:-0.190440944112;NFY{A,B,C}:-0.19334901372;GCM1,2:-0.219607078778;NFKB1_REL_RELA:-0.228543462465;RUNX1..3:-0.235096397765;HIF1A:-0.254647859949;FOSL2:-0.263099975053;RFX1:-0.297058486168;VSX1,2:-0.310555395877;HNF4A_NR2F1,2:-0.316257837154;REST:-0.326751867392;ELF1,2,4:-0.337041773737;SOX{8,9,10}:-0.346684208917;MEF2{A,B,C,D}:-0.347800239268;FOXP3:-0.355456187418;PITX1..3:-0.381838052658;PRRX1,2:-0.389732119079;ETS1,2:-0.398829031986;OCT4_SOX2{dimer}:-0.403253447613;MZF1:-0.409567202968;SPIB:-0.411222018156;PAX5:-0.412481324845;CDC5L:-0.420567814823;DBP:-0.455998365853;SPI1:-0.45958709923;ZBTB6:-0.459759873964;IKZF2:-0.464215616542;PAX6:-0.465508216837;POU5F1:-0.489183162795;ARID5B:-0.499067173912;IRF1,2:-0.511103447606;ELK1,4_GABP{A,B1}:-0.5478473499;TFAP2{A,C}:-0.549278722559;TBX4,5:-0.553486822851;TLX2:-0.56201664023;HIC1:-0.562214005724;CREB1:-0.565895740929;GATA6:-0.571019138958;PAX2:-0.574137149428;DMAP1_NCOR{1,2}_SMARC:-0.599174481027;IRF7:-0.629436555961;NR1H4:-0.636099700952;ATF2:-0.643451194782;FOXQ1:-0.646035335277;MYFfamily:-0.658847347271;PDX1:-0.679925938348;CUX2:-0.688074678983;TFAP2B:-0.70571390629;RFX2..5_RFXANK_RFXAP:-0.730103399698;NRF1:-0.737261145011;PAX3,7:-0.747107313003;CEBPA,B_DDIT3:-0.764651629789;ZFP161:-0.783281640414;SNAI1..3:-0.786540593117;HMGA1,2:-0.789203718424;ATF5_CREB3:-0.795489023064;RORA:-0.809106795873;BPTF:-0.829380840542;NHLH1,2:-0.854091706187;JUN:-0.856545979513;PATZ1:-0.863261821278;RREB1:-0.863773643307;BREu{core}:-0.867613960654;NFIL3:-0.885811746537;MTE{core}:-0.910073134158;SOX2:-0.911784662737;MED-1{core}:-0.912927143652;ZNF148:-0.936612361056;FOXM1:-0.94404922398;ZEB1:-0.945028193288;TGIF1:-0.973437640167;FOXA2:-0.974840418949;LMO2:-1.0052907817;EGR1..3:-1.04446706308;NKX6-1,2:-1.06439705604;FOX{D1,D2}:-1.0745394864;CRX:-1.08624161742;FOXP1:-1.09604889966;MAZ:-1.10360723609;FOX{F1,F2,J1}:-1.13481618491;NANOG:-1.15451304301;ATF4:-1.18182604272;FOX{I1,J2}:-1.22128534174;SP1:-1.26423515951;ADNP_IRX_SIX_ZHX:-1.27183017944;MYOD1:-1.33239804836;SREBF1,2:-1.36722637871;STAT1,3:-1.50090781052;FOXN1:-1.54464811792;FOXO1,3,4:-1.70590015274;EP300:-1.73474337432
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11698-123A6;search_select_hide=table117:FF:11698-123A6
 
}}
 
}}

Latest revision as of 09:15, 4 June 2020

Name:Mesenchymal Stem Cells - adipose, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12922
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueadipose tissue
dev stageNA
sexNA
ageNA
cell typemesenchymal stem cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2534
catalog numberSC7515
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004705
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12922 CAGE DRX008348 DRR009220
Accession ID Hg19

Library idBAMCTSS
CNhs12922 DRZ000645 DRZ002030
Accession ID Hg38

Library idBAMCTSS
CNhs12922 DRZ011995 DRZ013380
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.161
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.377
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.266
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0225
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.275
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0036
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.783
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.757
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.692
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart1.52
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.643
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.718
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00647
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.565
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.451
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.219
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.43
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature-0.0345
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.43
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.84
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.935
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.642
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.783
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12922

Jaspar motifP-value
MA0002.20.656
MA0003.10.237
MA0004.10.673
MA0006.10.524
MA0007.10.0143
MA0009.10.675
MA0014.10.861
MA0017.10.103
MA0018.21.9566e-4
MA0019.10.527
MA0024.10.736
MA0025.10.00166
MA0027.10.364
MA0028.10.41
MA0029.10.999
MA0030.11.22174e-4
MA0031.10.0439
MA0035.20.489
MA0038.10.588
MA0039.20.349
MA0040.10.443
MA0041.10.813
MA0042.10.764
MA0043.14.87078e-8
MA0046.10.272
MA0047.20.603
MA0048.10.195
MA0050.10.00173
MA0051.10.0172
MA0052.10.734
MA0055.10.155
MA0057.10.534
MA0058.10.766
MA0059.10.0358
MA0060.10.0242
MA0061.10.603
MA0062.20.00428
MA0065.20.0322
MA0066.10.015
MA0067.10.0122
MA0068.10.006
MA0069.10.522
MA0070.10.666
MA0071.10.141
MA0072.10.269
MA0073.10.835
MA0074.10.143
MA0076.10.0258
MA0077.10.976
MA0078.10.536
MA0079.20.0399
MA0080.25.41638e-5
MA0081.10.0179
MA0083.10.137
MA0084.10.0291
MA0087.10.747
MA0088.10.0204
MA0090.10.277
MA0091.10.0936
MA0092.10.246
MA0093.10.708
MA0099.20.0677
MA0100.10.835
MA0101.10.433
MA0102.20.00637
MA0103.10.412
MA0104.20.29
MA0105.10.0048
MA0106.10.0479
MA0107.10.237
MA0108.20.206
MA0111.10.534
MA0112.21.01561e-5
MA0113.10.207
MA0114.10.177
MA0115.10.574
MA0116.14.78389e-4
MA0117.10.498
MA0119.10.0147
MA0122.10.308
MA0124.10.738
MA0125.10.237
MA0131.10.348
MA0135.10.174
MA0136.11.29982e-4
MA0137.20.164
MA0138.20.175
MA0139.10.992
MA0140.10.979
MA0141.10.0057
MA0142.10.874
MA0143.10.889
MA0144.10.878
MA0145.10.28
MA0146.10.357
MA0147.10.12
MA0148.10.463
MA0149.10.035
MA0150.10.534
MA0152.10.0667
MA0153.10.756
MA0154.10.0272
MA0155.10.745
MA0156.10.0013
MA0157.10.57
MA0159.10.314
MA0160.10.544
MA0162.10.115
MA0163.19.6243e-7
MA0164.10.701
MA0258.10.00603
MA0259.10.635



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12922

Novel motifP-value
10.0214
100.0663
1000.153
1010.891
1020.908
1030.107
1040.456
1050.0975
1060.0723
1070.029
1080.313
1090.0482
110.0528
1100.0527
1110.0635
1120.132
1130.136
1140.0986
1150.0872
1160.0489
1170.139
1180.46
1190.238
120.406
1200.0757
1210.999
1220.192
1230.872
1240.696
1250.0473
1260.641
1270.104
1280.14
1290.905
130.0939
1300.329
1310.833
1320.607
1330.471
1340.551
1350.961
1360.744
1370.264
1380.886
1390.473
140.391
1400.145
1410.259
1420.794
1430.0782
1440.688
1450.0765
1460.708
1470.0664
1480.041
1490.399
150.186
1500.174
1510.505
1520.21
1530.955
1540.918
1550.669
1560.561
1570.21
1580.345
1590.272
160.028
1600.0253
1610.883
1620.281
1630.751
1640.249
1650.601
1660.166
1670.174
1680.297
1690.00401
170.186
180.068
190.0433
20.649
200.675
210.061
220.281
230.417
240.41
250.989
260.0186
270.428
280.293
290.0881
30.0761
300.856
310.725
321.95583e-7
330.211
340.629
350.271
360.0619
370.047
380.338
390.266
40.861
400.197
410.589
420.365
430.124
440.0167
450.93
460.0328
470.094
480.105
490.205
50.481
500.683
510.472
520.903
530.555
540.768
550.761
560.59
570.11
580.683
590.0714
60.499
600.47
610.676
620.274
630.12
640.293
650.146
660.89
670.318
680.586
690.164
70.641
700.124
710.0226
720.827
730.076
740.101
750.127
760.726
770.0621
780.536
790.0202
80.00295
800.303
810.253
820.466
830.569
840.389
850.132
860.768
870.148
880.584
890.154
90.381
900.286
910.562
920.15
930.71
940.0521
950.107
960.19
970.462
980.149
990.0164



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12922


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)

UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000096 (human mesenchymal stem cell of adipose sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)