FF:11760-123H5: Difference between revisions

Latest revision as of 18:18, 4 June 2020

Name:	mesenchymal precursor cell - ovarian cancer left ovary, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs12376
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005216

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12376		CAGE		DRX008557		DRR009429

Accession ID Hg19

Library id		BAM		CTSS
CNhs12376		DRZ000854		DRZ002239

Accession ID Hg38

Library id		BAM		CTSS
CNhs12376		DRZ012204		DRZ013589

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.01
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0985
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.21
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0782
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0116
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.407
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0311
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0148
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.112
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.117
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.117
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0627
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0366
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.021
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0169
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.117
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.117
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.319
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.477
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.542
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.407
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.542
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12376

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.165
MA0003.1	MA0003.1	0.637
MA0004.1	MA0004.1	0.0841
MA0006.1	MA0006.1	0.379
MA0007.1	MA0007.1	0.978
MA0009.1	MA0009.1	0.185
MA0014.1	MA0014.1	0.89
MA0017.1	MA0017.1	0.101
MA0018.2	MA0018.2	0.0182
MA0019.1	MA0019.1	0.196
MA0024.1	MA0024.1	0.143
MA0025.1	MA0025.1	0.625
MA0027.1	MA0027.1	0.673
MA0028.1	MA0028.1	0.242
MA0029.1	MA0029.1	0.564
MA0030.1	MA0030.1	0.214
MA0031.1	MA0031.1	0.108
MA0035.2	MA0035.2	0.103
MA0038.1	MA0038.1	0.394
MA0039.2	MA0039.2	0.0347
MA0040.1	MA0040.1	0.642
MA0041.1	MA0041.1	0.515
MA0042.1	MA0042.1	0.982
MA0043.1	MA0043.1	0.234
MA0046.1	MA0046.1	0.549
MA0047.2	MA0047.2	0.721
MA0048.1	MA0048.1	0.118
MA0050.1	MA0050.1	0.118
MA0051.1	MA0051.1	0.461
MA0052.1	MA0052.1	0.05
MA0055.1	MA0055.1	0.167
MA0057.1	MA0057.1	0.97
MA0058.1	MA0058.1	0.0182
MA0059.1	MA0059.1	0.244
MA0060.1	MA0060.1	0.0385
MA0061.1	MA0061.1	0.665
MA0062.2	MA0062.2	0.246
MA0065.2	MA0065.2	0.00248
MA0066.1	MA0066.1	0.129
MA0067.1	MA0067.1	0.0175
MA0068.1	MA0068.1	0.122
MA0069.1	MA0069.1	0.612
MA0070.1	MA0070.1	0.784
MA0071.1	MA0071.1	0.104
MA0072.1	MA0072.1	0.244
MA0073.1	MA0073.1	0.926
MA0074.1	MA0074.1	0.989
MA0076.1	MA0076.1	0.34
MA0077.1	MA0077.1	0.788
MA0078.1	MA0078.1	0.814
MA0079.2	MA0079.2	0.428
MA0080.2	MA0080.2	7.50352e-8
MA0081.1	MA0081.1	0.0348
MA0083.1	MA0083.1	1.73577e-7
MA0084.1	MA0084.1	0.153
MA0087.1	MA0087.1	0.587
MA0088.1	MA0088.1	0.421
MA0090.1	MA0090.1	0.00274
MA0091.1	MA0091.1	0.761
MA0092.1	MA0092.1	0.952
MA0093.1	MA0093.1	0.193
MA0099.2	MA0099.2	3.67652e-9
MA0100.1	MA0100.1	0.701
MA0101.1	MA0101.1	0.166
MA0102.2	MA0102.2	0.929
MA0103.1	MA0103.1	5.12456e-4
MA0104.2	MA0104.2	0.00328
MA0105.1	MA0105.1	0.951
MA0106.1	MA0106.1	0.235
MA0107.1	MA0107.1	0.092
MA0108.2	MA0108.2	3.2948e-5
MA0111.1	MA0111.1	0.19
MA0112.2	MA0112.2	0.103
MA0113.1	MA0113.1	0.873
MA0114.1	MA0114.1	0.0184
MA0115.1	MA0115.1	0.0333
MA0116.1	MA0116.1	0.0274
MA0117.1	MA0117.1	0.729
MA0119.1	MA0119.1	0.978
MA0122.1	MA0122.1	0.214
MA0124.1	MA0124.1	0.391
MA0125.1	MA0125.1	0.254
MA0131.1	MA0131.1	0.962
MA0135.1	MA0135.1	0.143
MA0136.1	MA0136.1	2.64004e-6
MA0137.2	MA0137.2	0.982
MA0138.2	MA0138.2	0.156
MA0139.1	MA0139.1	0.313
MA0140.1	MA0140.1	0.259
MA0141.1	MA0141.1	0.031
MA0142.1	MA0142.1	0.595
MA0143.1	MA0143.1	0.717
MA0144.1	MA0144.1	0.857
MA0145.1	MA0145.1	0.828
MA0146.1	MA0146.1	0.136
MA0147.1	MA0147.1	0.0144
MA0148.1	MA0148.1	0.926
MA0149.1	MA0149.1	0.428
MA0150.1	MA0150.1	0.282
MA0152.1	MA0152.1	0.0041
MA0153.1	MA0153.1	0.608
MA0154.1	MA0154.1	0.209
MA0155.1	MA0155.1	0.358
MA0156.1	MA0156.1	0.0888
MA0157.1	MA0157.1	0.106
MA0159.1	MA0159.1	0.0753
MA0160.1	MA0160.1	0.00936
MA0162.1	MA0162.1	0.289
MA0163.1	MA0163.1	0.117
MA0164.1	MA0164.1	0.992
MA0258.1	MA0258.1	0.014
MA0259.1	MA0259.1	0.435

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12376

Novel motif	Logo	P-value
1	1	0.173
10	10	0.341
100	100	0.443
101	101	0.936
102	102	0.142
103	103	0.895
104	104	0.773
105	105	0.335
106	106	0.959
107	107	0.364
108	108	0.674
109	109	0.158
11	11	0.478
110	110	0.52
111	111	0.0621
112	112	0.429
113	113	0.0177
114	114	0.327
115	115	0.751
116	116	0.511
117	117	0.919
118	118	0.307
119	119	0.407
12	12	0.327
120	120	0.214
121	121	0.757
122	122	0.0499
123	123	8.68673e-4
124	124	0.328
125	125	0.798
126	126	0.546
127	127	0.877
128	128	0.918
129	129	0.647
13	13	0.23
130	130	0.619
131	131	0.072
132	132	0.856
133	133	0.706
134	134	0.463
135	135	0.826
136	136	0.937
137	137	0.876
138	138	0.706
139	139	0.748
14	14	0.169
140	140	0.401
141	141	0.569
142	142	0.991
143	143	0.63
144	144	0.747
145	145	0.712
146	146	0.599
147	147	0.235
148	148	0.174
149	149	0.497
15	15	0.492
150	150	0.254
151	151	0.157
152	152	0.177
153	153	0.505
154	154	0.801
155	155	0.00118
156	156	0.264
157	157	0.145
158	158	0.00284
159	159	0.135
16	16	0.314
160	160	0.581
161	161	0.353
162	162	0.605
163	163	0.488
164	164	0.761
165	165	0.981
166	166	0.427
167	167	0.209
168	168	0.873
169	169	0.625
17	17	0.734
18	18	0.619
19	19	0.936
2	2	0.743
20	20	0.609
21	21	0.331
22	22	0.767
23	23	0.347
24	24	0.808
25	25	0.0802
26	26	0.538
27	27	0.719
28	28	0.49
29	29	0.992
3	3	0.717
30	30	0.472
31	31	0.599
32	32	0.0019
33	33	0.935
34	34	0.926
35	35	0.668
36	36	0.0365
37	37	0.837
38	38	0.221
39	39	0.424
4	4	0.173
40	40	0.101
41	41	0.232
42	42	0.638
43	43	0.269
44	44	0.659
45	45	0.713
46	46	0.45
47	47	0.205
48	48	0.485
49	49	0.00693
5	5	0.74
50	50	0.796
51	51	0.476
52	52	0.984
53	53	0.105
54	54	0.591
55	55	0.287
56	56	0.517
57	57	0.302
58	58	0.0693
59	59	0.407
6	6	0.209
60	60	0.513
61	61	0.195
62	62	0.209
63	63	0.534
64	64	0.408
65	65	0.546
66	66	0.825
67	67	0.986
68	68	0.756
69	69	0.0649
7	7	0.0693
70	70	0.0889
71	71	0.389
72	72	0.405
73	73	0.584
74	74	0.1
75	75	0.803
76	76	0.658
77	77	0.625
78	78	0.0194
79	79	0.094
8	8	0.603
80	80	0.553
81	81	0.254
82	82	0.176
83	83	0.954
84	84	0.831
85	85	0.935
86	86	0.994
87	87	0.504
88	88	0.977
89	89	0.666
9	9	0.666
90	90	0.997
91	91	0.748
92	92	0.755
93	93	0.625
94	94	0.655
95	95	0.614
96	96	0.482
97	97	0.244
98	98	0.00673
99	99	0.0323

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12376

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000273 human mesenchymal precursor cell- ovarian cancer-left ovary sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008449
+|DRA_sample_Accession=CAGE@SAMD00005216
+|accession_numbers=CAGE;DRX008557;DRR009429;DRZ000854;DRZ002239;DRZ012204;DRZ013589
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
@@ Line 8: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.76!56.05!PAX8;;chr8:55370487..55370503,+!p1@SOX17!1.49!29.66!SOX17;;chr20:50179368..50179392,-!p2@NFATC2!1.33!26.08!NFATC2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.32!19.72!ZBED1;;chr11:61520075..61520136,+!p1@C11orf9!1.31!40.99!C11orf9;;chr21:36260773..36260804,-!p7@RUNX1!1.30!25.62!RUNX1;;chr15:83953397..83953425,-!p1@BNC1!1.27!20.03!BNC1;;chr11:46299199..46299233,+!p1@CREB3L1!1.20!76.70!CREB3L1;;chr12:26277817..26277863,-!p2@BHLHE41!1.19!19.56!BHLHE41;;chr8:11561684..11561751,+!p1@GATA4!1.16!13.35!GATA4;;chr19:42636586..42636607,-!p1@POU2F2!1.13!34.47!POU2F2;;chr1:170632285..170632309,+!p1@PRRX1!1.13!14.28!PRRX1;;chr8:106330656..106330684,+!p1@ZFPM2!1.11!31.21!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.04!26.86!HIC1;;chr8:72756267..72756296,-!p4@MSC!1.04!14.59!MSC;;chr10:64576105..64576133,-!p1@EGR2!1.03!20.18!EGR2;;chr6:134210243..134210257,+!p1@TCF21!1.03!9.78!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.01!9.32!HOXC5;;chr2:102091566..102091581,-!p1@RFX8!1.01!9.16!RFX8;;chr19:45971246..45971265,+!p1@FOSB!1.00!169.86!FOSB;;chr12:66218598..66218645,+!p2@HMGA2!1.00!42.08!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.96!26.08!GATA6;;chr11:32457075..32457095,-!p1@WT1!0.96!8.07!WT1;;chr1:170632115..170632136,+!p9@PRRX1!0.95!7.92!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!0.94!21.58!HMGA2;;chr1:170632137..170632172,+!p10@PRRX1!0.94!7.76!PRRX1;;chr11:120107344..120107351,+!p1@POU2F3!0.92!8.85!POU2F3;;chr17:1958388..1958404,+!p1@HIC1!0.91!47.67!HIC1;;chr3:141087393..141087426,+!p3@ZBTB38!0.91!29.81!ZBTB38;;chr1:170633348..170633399,+!p2@PRRX1!0.90!9.63!PRRX1;;chr8:72756637..72756664,-!p3@MSC!0.90!7.92!MSC;;chr9:16705069..16705086,-!p3@BNC2!0.90!6.99!BNC2;;chr12:26277956..26277980,-!p1@BHLHE41!0.89!25.31!BHLHE41;;chr3:141087454..141087465,+!p19@ZBTB38!0.88!6.52!ZBTB38;;chr2:239756739..239756755,+!p2@TWIST2!0.87!11.18!TWIST2;;chr1:170633262..170633285,+!p3@PRRX1!0.86!7.14!PRRX1;;chr3:25470156..25470227,+!p2@RARB!0.86!6.21!RARB;;chr2:19558373..19558392,-!p1@OSR1!0.85!17.70!OSR1;;chr12:66218183..66218209,+!p4@HMGA2!0.85!12.11!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.85!10.56!CREB3L1;;chr17:46622114..46622138,-!p4@HOXB2!0.85!9.63!HOXB2;;chr7:1577899..1577943,+!p3@MAFK!0.85!6.06!MAFK;;chr12:66218212..66218244,+!p5@HMGA2!0.84!8.85!HMGA2;;chr12:26277929..26277955,-!p3@BHLHE41!0.84!8.54!BHLHE41;;chr19:46801639..46801699,+!p1@HIF3A!0.83!5.74!HIF3A;;chr1:151032860..151032918,+!p1@MLLT11!0.82!71.89!MLLT11;;chr8:72756667..72756736,-!p2@MSC!0.81!8.85!MSC;;chr7:26191809..26191890,+!p1@NFE2L3!0.80!28.26!NFE2L3;;chr8:72756063..72756125,-!p1@MSC!0.80!11.33!MSC;;chr7:27183263..27183284,-!p2@HOXA5!0.80!5.28!HOXA5;;chr9:127269661..127269719,-!p1@NR5A1!0.80!5.28!NR5A1;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.12!FOXL2;;chr17:46132044..46132080,+!p4@NFE2L1!0.79!5.12!NFE2L1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.78!67.38!ZC3H12A;;chr17:46622070..46622109,-!p1@HOXB2!0.78!11.96!HOXB2;;chr8:106330696..106330719,+!p2@ZFPM2!0.78!6.52!ZFPM2;;chr12:54394309..54394336,+!p2@HOXC9!0.78!4.97!HOXC9;;chr17:45928521..45928539,-!p1@SP6!0.78!4.97!SP6;;chr15:96869114..96869160,+!p11@NR2F2!0.77!6.83!NR2F2;;chr7:44143925..44143970,+!p1@AEBP1!0.76!116.29!AEBP1;;chr8:49833948..49833973,-!p2@SNAI2!0.76!32.92!SNAI2;;chr18:19749386..19749404,+!p2@GATA6!0.76!6.99!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!0.75!15.99!TWIST2;;chr1:170632051..170632081,+!p16@PRRX1!0.74!4.50!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.74!4.50!PRRX1;;chr3:25469815..25469866,+!p3@RARB!0.73!4.35!RARB;;chr17:45928443..45928473,-!p2@SP6!0.73!4.35!SP6;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.75!SNAI2;;chr12:115121962..115121987,-!p1@TBX3!0.72!39.90!TBX3;;chr2:66662281..66662308,+!p1@MEIS1!0.72!16.30!MEIS1;;chr16:86544113..86544145,+!p1@FOXF1!0.72!5.43!FOXF1;;chr7:27183291..27183324,-!p1@HOXA5!0.72!4.19!HOXA5;;chr8:72756213..72756243,-!p5@MSC!0.71!5.59!MSC;;chr2:121493425..121493474,+!p1@GLI2!0.70!9.63!GLI2;;chr6:45296048..45296082,+!p1@RUNX2!0.70!4.66!RUNX2;;chr1:170632250..170632277,+!p7@PRRX1!0.70!4.04!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!0.70!4.04!HOXC8;;chr12:54447637..54447659,+!p4@HOXC4!0.70!4.04!HOXC4;;chr10:94449703..94449718,+!p1@HHEX!0.69!17.08!HHEX;;chr1:151032922..151032951,+!p2@MLLT11!0.69!6.99!MLLT11;;chr1:170632959..170632987,+!p4@PRRX1!0.69!4.35!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!0.69!3.88!PKNOX2;;chr1:59249688..59249703,-!p3@JUN!0.68!25.62!JUN;;chr15:96874927..96874938,+!p8@NR2F2!0.68!8.85!NR2F2;;chr3:141121847..141121868,+!p5@ZBTB38!0.68!6.06!ZBTB38;;chr17:46622205..46622218,-!p3@HOXB2!0.68!4.50!HOXB2;;chr4:174450089..174450153,-!p2@HAND2!0.67!3.73!HAND2;;chr4:174451370..174451387,-!p1@HAND2!0.67!3.73!HAND2;;chr11:65686732..65686756,+!p2@DRAP1!0.66!17.39!DRAP1;;chr1:151032782..151032801,+!p4@MLLT11!0.66!7.92!MLLT11;;chr2:102091144..102091183,-!p2@RFX8!0.66!3.57!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.66!3.57!HOXD8;;chr12:66218836..66218888,+!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@@ Line 39: / Line 41: @@
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@@ Line 48: / Line 60: @@
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-|DRA_sample_Accession=CAGE@DRS008449
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 }}

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FF:11760-123H5: Difference between revisions

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Latest revision as of 18:18, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0