FF:11801-124D1: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (22 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005678 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008163;DRR009035;DRZ000460;DRZ001845;DRZ011810;DRZ013195 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0002393,CL:0002397 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011112 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16%252b%2520Monocytes%252c%2520donor2.CNhs13208.11801-124D1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16%252b%2520Monocytes%252c%2520donor2.CNhs13208.11801-124D1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16%252b%2520Monocytes%252c%2520donor2.CNhs13208.11801-124D1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16%252b%2520Monocytes%252c%2520donor2.CNhs13208.11801-124D1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16%252b%2520Monocytes%252c%2520donor2.CNhs13208.11801-124D1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11801-124D1 | |id=FF:11801-124D1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011112 | ||
|is_obsolete= | |||
|library_id=CNhs13208 | |||
|library_id_phase_based=2:CNhs13208 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11801 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11801 | |||
|name=CD14+CD16+ Monocytes, donor2 | |name=CD14+CD16+ Monocytes, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13208,LSID1004,release012,COMPLETED | |profile_hcage=CNhs13208,LSID1004,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.17855042445748,0.0837191039350518,0,0,0.153878434287253,0.106951626516669,0,-0.0630978447716875,-0.0072128394023875,0,0,0,0,0,0,0,0,0,0.214264287421827,0,0,0,-0.0696039064133759,0,0,0,0,0,-0.0142387923330057,0,0,0.181547164227639,0,0,0,0,0,0,0,0.357100848914959,0,0.214264287421827,0,0,-0.0387675732550996,0.0354970286959976,0,0,0,0,0,0,0,0.0176445308546916,0,0,0,0.0837191039350518,0,-0.0823500874508914,0.153878434287253,0.17027729536045,0,0.0837191039350518,-0.0136245232780452,0,0.905128126444729,0,0,0,0,0,0,0.0837191039350518,0,1.18311284555315,0,0,0.314503754006501,0,0,0,0.0640330945083313,0.0418595519675259,0,0,0,0,-0.0105416694968111,-0.359974208649201,0.133634828301528,0,0,0.0372498030726673,-0.0923986335847166,0.0418595519675259,0.0837191039350518,0.311058523645722,0,-0.0980353512377064,0.093725741565708,0,0,0,0,0,0.0769392171436265,0,0,0,0,0,0,0,0,0,0,0,0.0372612343790666,0.153878434287253,0,0,-0.0342135981739209,-0.122917284509784,0,0.0837191039350518,0.046987983096821,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0.214264287421827,-0.0980353512377064,0,0,0,0,0.153878434287253,0.267269656603055,0,0,0.0837191039350518,0,0,0.0200907813174906,0,0.101546769215174,0.351479805050442,0.0418595519675259,0.550381442349109,-0.206869110484565,0,0.0837191039350518,0,0.0418595519675259,0.0837191039350518,0,0.153878434287253,0.0837191039350518,0,-0.128119866952565,0.267269656603055,-0.0504125515893149,0,0,0,0,0,0.0904183084778078,0,-0.0671259174385965,-0.0683442610773682,0,0,0,0,-0.0498306929093195,0,-0.120879483793741,0.131544119098409,0,-0.532740227912718,0.167459628529447,0,0,0.0418595519675259,-0.452545870269866,-0.934659809457836,0,0,0.273168785942631,0.559653828073375,0,0,-0.391044581551635,0,-0.505481544241512,-0.0703176259247736,0,-0.124618025546383,0,0,0,0,0.240766972012441,0,0,0,0,0,0,-0.0156339148539107,0.0689019426972462,0,0,0,-0.00556547604138802,-0.208293202690242,0,-0.0182751901897155,-0.289567052021515,-0.350736013296859,-0.0228156116510915,-0.348562192679617,0,0.90999791578067,0.0220880024731407,-0.0185030135335775,0.0372498030726673,-0.147401849371139,-0.189981719549847,0,-0.28163581680633,-0.142655267858675,-0.08554110992376,-0.0598844028619929,-0.090226503265687,-1.14768940435205,-0.24781044089887,0.0837191039350518,0,-0.0244744193209068,-0.369253247861214,0,-0.0485979971564323,-0.175610960470272,-0.0264335902190664,-0.455238458245825,0.30669347723713,-0.28944294637264,0.189874517250672,-0.0395325284566706,0.0661340889725843,-0.122671200875652,-0.4215723249037,0,0.0837191039350518,0,0.0616339396502895,-0.428811258192364,1.12622379670144,-0.0662417628438016,0.344702802210509,0.0855341732098844,0,-0.538311023210529,-0.0652354274639819,0,0,0.0433398164200317,0,0,0,0,0,-0.206855169180619,-0.0444971954562521,0.231550323177661,0,-0.274395213854232,-0.060244907953949,-0.297286080352587,0,-0.00177741603375681,0.0682543899644323,0,0.103256734779979,0,-0.163171788448774,-0.173091327078934,-0.081271592403951,-0.268516371104485,0.0954316074754274,0.476216491863092,-0.0647632904949886,-0.425501149147941,-0.357441908330453,-0.318000969628298,-0.0881268324752877,-0.119324010656096,-0.359974208649201,0.565598188736272,0,-0.404979479772092,0,-0.129536826936367,0,0.132871547904584,0.0418595519675259,0.365130189690925,-0.225929997466739,0.0251165101525199,0.687111353115843,0,-0.0744818379565895,-0.788130937773974,0,-0.188665269236929,0,0,-0.150367083334639,-0.697695966512583,0.623081843384331,-0.138989456679195,-0.0771532328065663,-0.790080158389657,0,0,-0.264180789141168,0.12162481115057,0.0837191039350518,-0.00819289607684495,0.128362639971486,0.0794502268686967,0.0379073608523185,0.0837191039350518,0,-0.561981234057673,0,0,-0.60592806381803,-0.0878535008809982,-0.619783323958633,0.779284273179718,0,-0.0667632574867295,0,0,0.218362773411039,0,-0.0781839837390645,0.0275800796415803,0.153878434287253,-0.166162192663772,0,0,0.597530295176265,0,-0.0434069932431903,0,0,0.0837191039350518,0,0,0,0,-0.0237437324739918,-0.271114226281396,0,0,0,0.0837191039350518,0,0,0,0,0,0.0837191039350518,-1.50861173488462,-0.0493218691415112,-0.12301741567642,0,0,0,0,-0.132004298618423,0.0640330945083313,0.153878434287253,-0.0481436025625799,0,0,0.0837191039350518,0,0.22836276421729,0,0.0837191039350518,0.0418595519675259,0.107132143710913,-0.057730457053664,0.10004567172585,0,0,0,0.187451483131416,0,0,0,0,0.191603427799252,0,0,-0.081548731037271,0,0.226879826235564,-0.0815818795468414,0,0.033075227200484,0.0384293223489003,-1.22590123671341,0,0,0.0531566222166138,0,0.0247227516718885,0.0375107810835664,0,0,-0.0153181609161851,0,0,0.0418595519675259,0,0.0837191039350518,0.622117047291444,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,0.220035243521329,0.122040230763316,-0.0640596705171081,0,0,0,0,0,0,-0.0241060230789031,0.0102428798729385,0,0,0,0,0,0.0837191039350518,0,0,-0.471425939663242,0,0,0.509282744721546,0,0,0.17027729536045,0,0.153878434287253,0.153878434287253,0.357100848914959,-0.014425678804775,0,0.0837191039350518,-0.0630978447716875,0,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,0,0.143950570567607,-0.215317297901393,0,0,0,0,0,0,0,0.0822675507088681,0,0,0,0,1.91065842944032,0,0,0,-0.104796384789156,0,0.106951626516669,0,0.0837191039350518,0.0837191039350518,0.0769392171436265,0,0.0837191039350518,0.0418595519675259,0.0418595519675259,0,0,0.0837191039350518,0,0,0,0.17855042445748,0,0.314503754006501,0,0,0,0,-0.506273229924513,0,0,-0.0568589461625992,0,0,-0.232628352633041,0,0.0146180974634658,0,0,0,0,0.0455987931150992,0,0,0,0,0,0,0.118798769111152,0,0,1.19506059035253,0,0,0.148991695678439,0,0,0,0,0.0131496345327108,0.153878434287253,0,0,0.314503754006501,0,0,0,0.066100181644555,0,0,0,0,0,0,0,-0.0142387923330057,0,0,0.574514752611392,0,0,0,0,0,0,-0.246117288689184,-0.283220399823148,-0.068146962759102,0,0,0,-0.054385572482455,0.0837191039350518,0,-0.0826437164684971,0.153878434287253,-0.0667773874189013,0,0,0.494994947573914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0696039064133759,0,0,0,0,0,0,0.0418595519675259,0,0,0,0,0.15725187700325,0.0418595519675259,0.247497473786957,0,0,0,0,0.78124954305694,0,0,0,0,0,0.0837191039350518,0,0.0837191039350518,0.0837191039350518,0.0769392171436265,0,0.31705027314208,0,0,0,0,0.0497077406596352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0837191039350518,0.00370063566641338,0,0,0,-0.129367125721992,0.214264287421827,0,0,0,0,0,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0,0,0,0.267269656603055,0,0,0,0,0,0,0,0,0,0,0,0.214264287421827,0,0,0.0837191039350518,0,0,0.599496639946219,0,-0.191164579528568,0,0,0,0,0,0,0,0,0,0.357100848914959,0,0,0,0.0354970286959976,0,-0.00065752829497534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264256929390114,0,0,0,0,0.219632545942136,0,0,0,0,0,0,0,0.0462063304996744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0608931457179963,0,0,0.0366011387749156,0,0,0.0418595519675259,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0.0837191039350518,0,0,0,-0.0484300422256687,0,0,0.78550801576274,0,0.395890539376215,0,0,0,0,0,0.0837191039350518,0,0,0,0,0.247497473786957,0.153878434287253,0.214264287421827,0,0,0,0,1.18311284555315,0,0,0,0,0,0,0,-0.043413741049172,-0.122917284509784,0,0,0.0055094760517062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232202942366603,0,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,0,0.148337403664652,0.107132143710913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329676045951117,0,0,0,0,0,0.0121626295948501,0,0,0,0.133634828301528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107132143710913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214264287421827,0,0,0.267269656603055,0,0,0,0.15725187700325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,0,0.0769392171436265,0,0,0,0,0,0.0837191039350518,0,0.0837191039350518,0,0,0,0,0,0,0.622117047291444,0,0,0,0,0,0,0,0,0,0,0,0,0.0837191039350518,0,0,0.153878434287253,0,0,0,0.0418595519675259,0,0.500602201168745,0,0,0,0,0,0,0,0,0,0,0,0.314503754006501,0.0837191039350518,0,0,0.0087331487335148,0,0.0745224687581331,0,0,0,0,0,0,0.0837191039350518,0,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0.255489641601106,0,0,0.431497956459774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769546798603701,0,0,0,0,0,0,0,-0.0389768930619491,0,0,0,0,0.0418595519675259,0,0,0,0,0,0,0,0,0,0,0,0,1.01513287364182,0,0.0418595519675259,0.17855042445748,0.0418595519675259,0,0,0.0837191039350518,0.553272341898891,0,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.018119768449964,0,0.0837191039350518,0,0,0,0.0837191039350518,0,0,0,0,0,0,0.664103295008432,0,0,0,0.0837191039350518,0.12216184823887,0,0,0,0,0,0,0,0,0,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0,0,0,0,0.0769392171436265,0,0,0,0.584361296343454,0,0,0,0,0,0,0.17855042445748,0,0,0.239804821655633,0,0,0,0,0,0,0,0,-0.0136245232780452,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0,0,0,0,0.214264287421827,0,0,0,0,0,0.181547164227639,0,0,0,0,0,0,0,0,0,0,0,0.0837191039350518,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622117047291444,0,0.118798769111152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,0,0,0,0,0,0.133634828301528,0,0,0,-0.0499379825215864,0.247497473786957,0,0,0,0,0,0,0.107132143710913,0.0837191039350518,0,0.065882052183106,0.287816493983591,0,0,0.905128126444729,0.523570541869179,0,0,0,0,0,0,0,0,0,0,0.0769392171436265,0,0.395890539376215,-0.055630256416253,0,0.596999401802223,1.40157203782163,0,-9.57753924481915e-05,-0.00204768966403157,0,0,0,0,0,-0.0225194142325543,0,0,0,0,0,0,0,0,0,0,0,0,0.0418595519675259,-0.0954789504563684,0,0,0,0,0.395890539376215,0,0.153878434287253,0,0,0,0,0,0.0837191039350518,0,0,0.0418595519675259,0.153878434287253,0.0837191039350518,0,0,0,0,0.148991695678439,0.363545265932371,0,0.0837191039350518,0.0979202590518995,0,0,0.027447124485999,0.08257501688191,0.0387959691442865,0,0.250533941077629,0,0.866099711261245,0.542102395949271,0,0,0,0,0,0,0,0.118798769111152,0.0837191039350518,0,0,0,0.0418595519675259,0.0418595519675259,0,0.0837191039350518,0,0,-0.0568589461625992,0.374141725660768,0,-0.295117150415372,0,0,-0.0781053106522872,0,0,0,-0.0122403034385351 | |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=1.3822 | |rna_weight_ug=1.3822 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.91022375844821e-223!GO:0043227;membrane-bound organelle;2.45952895642305e-158!GO:0043231;intracellular membrane-bound organelle;4.50621713001082e-158!GO:0005737;cytoplasm;2.92813420526642e-147!GO:0043226;organelle;9.04356497282249e-147!GO:0043229;intracellular organelle;5.29755147089799e-146!GO:0044444;cytoplasmic part;2.49466215749021e-107!GO:0044422;organelle part;1.04828393225395e-96!GO:0044446;intracellular organelle part;4.78917278539843e-95!GO:0044237;cellular metabolic process;9.94077219243413e-82!GO:0032991;macromolecular complex;1.54224689368447e-80!GO:0044238;primary metabolic process;5.67115519317991e-79!GO:0043170;macromolecule metabolic process;1.80669072399072e-76!GO:0030529;ribonucleoprotein complex;9.69063399136194e-76!GO:0003723;RNA binding;2.08243095506253e-69!GO:0005634;nucleus;5.35990648501628e-62!GO:0044428;nuclear part;1.75584505730722e-59!GO:0005739;mitochondrion;1.99374277251351e-57!GO:0043233;organelle lumen;3.72356245219161e-56!GO:0031974;membrane-enclosed lumen;3.72356245219161e-56!GO:0006412;translation;2.48914817380808e-54!GO:0005515;protein binding;3.12692722992415e-51!GO:0019538;protein metabolic process;2.2863470553062e-48!GO:0033036;macromolecule localization;2.31340287269628e-45!GO:0044260;cellular macromolecule metabolic process;5.52704815046426e-45!GO:0044267;cellular protein metabolic process;5.72191083431694e-45!GO:0015031;protein transport;1.70520640484397e-44!GO:0010467;gene expression;2.87846772696928e-44!GO:0045184;establishment of protein localization;5.71254957608165e-44!GO:0005840;ribosome;1.36522590024694e-43!GO:0006396;RNA processing;2.45495219808372e-43!GO:0008104;protein localization;2.31742941650621e-42!GO:0009059;macromolecule biosynthetic process;8.42443067620608e-42!GO:0043283;biopolymer metabolic process;1.32187039427776e-41!GO:0044429;mitochondrial part;2.56426839984844e-40!GO:0031090;organelle membrane;5.12636444692337e-40!GO:0043234;protein complex;4.3443302785218e-39!GO:0003735;structural constituent of ribosome;7.37036428197147e-39!GO:0016071;mRNA metabolic process;6.94924572923703e-38!GO:0005829;cytosol;7.80140049603507e-38!GO:0009058;biosynthetic process;9.21852613909292e-38!GO:0044249;cellular biosynthetic process;1.88371295854681e-37!GO:0031967;organelle envelope;1.00052232690571e-36!GO:0031981;nuclear lumen;1.99183971482306e-36!GO:0031975;envelope;2.13392198695009e-36!GO:0033279;ribosomal subunit;2.11112658596153e-35!GO:0008380;RNA splicing;1.2365502156271e-34!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2365502156271e-34!GO:0006397;mRNA processing;7.0690250113025e-33!GO:0006886;intracellular protein transport;5.30523567319531e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.27448262833829e-28!GO:0046907;intracellular transport;2.70484203525812e-28!GO:0016043;cellular component organization and biogenesis;5.41510389002694e-28!GO:0005740;mitochondrial envelope;2.40405407046496e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.91541619707665e-27!GO:0031966;mitochondrial membrane;2.75461009204093e-26!GO:0005681;spliceosome;5.7625111414775e-26!GO:0065003;macromolecular complex assembly;2.13059203771023e-25!GO:0019866;organelle inner membrane;2.3577551213417e-25!GO:0005654;nucleoplasm;3.07935167112888e-24!GO:0044445;cytosolic part;3.17296931905468e-24!GO:0005743;mitochondrial inner membrane;5.59198429888862e-23!GO:0003676;nucleic acid binding;7.59735127967286e-23!GO:0006119;oxidative phosphorylation;2.25014514995288e-22!GO:0006915;apoptosis;4.40265100741459e-22!GO:0012501;programmed cell death;5.21226076767421e-22!GO:0022607;cellular component assembly;2.25137904137564e-21!GO:0051649;establishment of cellular localization;2.91049641609379e-21!GO:0051641;cellular localization;1.15413035341168e-20!GO:0008219;cell death;2.3268114577607e-20!GO:0016265;death;2.3268114577607e-20!GO:0000166;nucleotide binding;2.61025172812395e-20!GO:0044451;nucleoplasm part;7.44155376552414e-20!GO:0022618;protein-RNA complex assembly;1.23319138461873e-19!GO:0044455;mitochondrial membrane part;2.86828729780097e-19!GO:0016070;RNA metabolic process;6.55448628941523e-19!GO:0015935;small ribosomal subunit;1.41800713001418e-18!GO:0044265;cellular macromolecule catabolic process;2.02186288620743e-18!GO:0006996;organelle organization and biogenesis;5.62578059343778e-18!GO:0015934;large ribosomal subunit;8.66236612045784e-18!GO:0008134;transcription factor binding;1.9037976846016e-17!GO:0006512;ubiquitin cycle;3.14860991446684e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.85214254714703e-16!GO:0006259;DNA metabolic process;4.47995660676659e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;4.95542472253064e-16!GO:0016462;pyrophosphatase activity;4.97264909220887e-16!GO:0017111;nucleoside-triphosphatase activity;8.26685627984265e-16!GO:0044248;cellular catabolic process;1.20776316601338e-15!GO:0031980;mitochondrial lumen;1.21518408394505e-15!GO:0005759;mitochondrial matrix;1.21518408394505e-15!GO:0005746;mitochondrial respiratory chain;1.66254555108581e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.67038746228547e-15!GO:0043412;biopolymer modification;2.17966346046325e-15!GO:0006605;protein targeting;2.23426534247768e-15!GO:0016192;vesicle-mediated transport;2.37280446250048e-15!GO:0016874;ligase activity;2.56143959062827e-15!GO:0008135;translation factor activity, nucleic acid binding;2.80308454272448e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.98361700608185e-15!GO:0048770;pigment granule;4.55766687847107e-15!GO:0042470;melanosome;4.55766687847107e-15!GO:0019941;modification-dependent protein catabolic process;4.59405528468532e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.59405528468532e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;5.22826967611259e-15!GO:0043285;biopolymer catabolic process;8.05244101880802e-15!GO:0006511;ubiquitin-dependent protein catabolic process;9.36703566369321e-15!GO:0044257;cellular protein catabolic process;9.36703566369321e-15!GO:0016604;nuclear body;1.20373024058631e-14!GO:0032553;ribonucleotide binding;1.5482204935983e-14!GO:0032555;purine ribonucleotide binding;1.5482204935983e-14!GO:0009057;macromolecule catabolic process;2.60675512543005e-14!GO:0017076;purine nucleotide binding;2.67599693638783e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.8176145336154e-14!GO:0003954;NADH dehydrogenase activity;3.8176145336154e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.8176145336154e-14!GO:0042981;regulation of apoptosis;3.96752881816412e-14!GO:0043067;regulation of programmed cell death;7.09084477144015e-14!GO:0006457;protein folding;8.75031485733057e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.88456853662246e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.25377813672377e-13!GO:0006464;protein modification process;1.35173417833376e-13!GO:0051186;cofactor metabolic process;1.61067680305805e-13!GO:0005773;vacuole;3.08989408104903e-13!GO:0005730;nucleolus;3.12107759667328e-13!GO:0006413;translational initiation;3.700367570192e-13!GO:0006913;nucleocytoplasmic transport;5.45803941314335e-13!GO:0003743;translation initiation factor activity;9.22344504145281e-13!GO:0012505;endomembrane system;1.00382377354045e-12!GO:0051169;nuclear transport;1.13139846778441e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.31581379140693e-12!GO:0042773;ATP synthesis coupled electron transport;1.31581379140693e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.26805335484757e-12!GO:0045271;respiratory chain complex I;2.26805335484757e-12!GO:0005747;mitochondrial respiratory chain complex I;2.26805335484757e-12!GO:0000323;lytic vacuole;2.61925601690139e-12!GO:0005764;lysosome;2.61925601690139e-12!GO:0043687;post-translational protein modification;2.90335349634082e-12!GO:0016607;nuclear speck;4.40618501273748e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.67218562021756e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.14615177555951e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.15351956525028e-11!GO:0006446;regulation of translational initiation;1.61371725501962e-11!GO:0043228;non-membrane-bound organelle;2.09142677565563e-11!GO:0043232;intracellular non-membrane-bound organelle;2.09142677565563e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.33618066935852e-11!GO:0000375;RNA splicing, via transesterification reactions;2.33618066935852e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.33618066935852e-11!GO:0006732;coenzyme metabolic process;3.18584518119558e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.25133013241449e-11!GO:0030163;protein catabolic process;5.64543006838434e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.92950547026535e-11!GO:0005761;mitochondrial ribosome;9.10061694804768e-11!GO:0000313;organellar ribosome;9.10061694804768e-11!GO:0006974;response to DNA damage stimulus;1.00774480766944e-10!GO:0003712;transcription cofactor activity;1.16449763022569e-10!GO:0005794;Golgi apparatus;1.58541599548573e-10!GO:0005524;ATP binding;1.76588170651325e-10!GO:0051246;regulation of protein metabolic process;1.88851948755845e-10!GO:0016787;hydrolase activity;2.46815305481302e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.54618015763618e-10!GO:0005768;endosome;2.60404191913858e-10!GO:0032559;adenyl ribonucleotide binding;2.7824237612369e-10!GO:0009259;ribonucleotide metabolic process;3.43553005463701e-10!GO:0007243;protein kinase cascade;3.54345688106312e-10!GO:0050794;regulation of cellular process;4.0865744070934e-10!GO:0006164;purine nucleotide biosynthetic process;4.98749963841422e-10!GO:0006163;purine nucleotide metabolic process;5.22455225681348e-10!GO:0030554;adenyl nucleotide binding;5.30511009520597e-10!GO:0008639;small protein conjugating enzyme activity;5.64371606129098e-10!GO:0048523;negative regulation of cellular process;5.72564914067741e-10!GO:0006793;phosphorus metabolic process;6.77509011156155e-10!GO:0006796;phosphate metabolic process;6.77509011156155e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.1378197462162e-10!GO:0009150;purine ribonucleotide metabolic process;8.21942322302546e-10!GO:0051082;unfolded protein binding;8.56169445806099e-10!GO:0017038;protein import;8.90340384160992e-10!GO:0009260;ribonucleotide biosynthetic process;9.00130956057274e-10!GO:0004842;ubiquitin-protein ligase activity;1.09625180032956e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.17428456691658e-09!GO:0005635;nuclear envelope;1.38201016993782e-09!GO:0048193;Golgi vesicle transport;1.54355955617781e-09!GO:0042254;ribosome biogenesis and assembly;2.23137469368039e-09!GO:0019787;small conjugating protein ligase activity;3.14193007993695e-09!GO:0009056;catabolic process;4.08704784692427e-09!GO:0015986;ATP synthesis coupled proton transport;4.74973891169543e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.74973891169543e-09!GO:0042623;ATPase activity, coupled;4.8744855228321e-09!GO:0019829;cation-transporting ATPase activity;5.22754898568316e-09!GO:0007049;cell cycle;5.63841789052597e-09!GO:0065009;regulation of a molecular function;6.03448245934813e-09!GO:0015078;hydrogen ion transmembrane transporter activity;7.06594683492402e-09!GO:0016887;ATPase activity;7.85257562861018e-09!GO:0005783;endoplasmic reticulum;1.01423942978458e-08!GO:0016310;phosphorylation;1.08874548945563e-08!GO:0006366;transcription from RNA polymerase II promoter;1.21804978742384e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.43255485231781e-08!GO:0009055;electron carrier activity;1.79357154955888e-08!GO:0006281;DNA repair;1.95646328282846e-08!GO:0043069;negative regulation of programmed cell death;2.09986288172834e-08!GO:0008026;ATP-dependent helicase activity;2.30318755140645e-08!GO:0008565;protein transporter activity;2.39067358514176e-08!GO:0048519;negative regulation of biological process;2.4758523350931e-08!GO:0043066;negative regulation of apoptosis;2.64467880223162e-08!GO:0044453;nuclear membrane part;2.91486215744043e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.02478436761194e-08!GO:0004386;helicase activity;3.52010053307842e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.75168196961427e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.75168196961427e-08!GO:0016469;proton-transporting two-sector ATPase complex;3.86215690210588e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.89888726364341e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.89888726364341e-08!GO:0006417;regulation of translation;3.90657836234352e-08!GO:0006323;DNA packaging;4.04838933504417e-08!GO:0009060;aerobic respiration;4.47937330759887e-08!GO:0006754;ATP biosynthetic process;4.80675202765347e-08!GO:0006753;nucleoside phosphate metabolic process;4.80675202765347e-08!GO:0051726;regulation of cell cycle;4.9984232527095e-08!GO:0007242;intracellular signaling cascade;5.97181383381971e-08!GO:0000074;regulation of progression through cell cycle;6.49917290108282e-08!GO:0050657;nucleic acid transport;6.80491455403666e-08!GO:0051236;establishment of RNA localization;6.80491455403666e-08!GO:0050658;RNA transport;6.80491455403666e-08!GO:0051188;cofactor biosynthetic process;7.05353437579173e-08!GO:0031965;nuclear membrane;7.60633804279062e-08!GO:0009199;ribonucleoside triphosphate metabolic process;8.79603609177069e-08!GO:0031324;negative regulation of cellular metabolic process;9.43828883624447e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.47295818834484e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.47295818834484e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.88077062947673e-08!GO:0006403;RNA localization;9.88077062947673e-08!GO:0051170;nuclear import;1.14674239916723e-07!GO:0009141;nucleoside triphosphate metabolic process;1.6514601805886e-07!GO:0044432;endoplasmic reticulum part;1.70076955036471e-07!GO:0004298;threonine endopeptidase activity;1.82008722417775e-07!GO:0045786;negative regulation of progression through cell cycle;1.91606221508505e-07!GO:0003713;transcription coactivator activity;1.9647864028405e-07!GO:0046034;ATP metabolic process;2.00288685336895e-07!GO:0006606;protein import into nucleus;2.08328431921411e-07!GO:0006399;tRNA metabolic process;2.38136903084802e-07!GO:0016568;chromatin modification;2.46023377386226e-07!GO:0005770;late endosome;2.65130069555483e-07!GO:0016881;acid-amino acid ligase activity;2.67695419552315e-07!GO:0009615;response to virus;2.68466667613355e-07!GO:0005643;nuclear pore;2.79097215061798e-07!GO:0006916;anti-apoptosis;2.90587537935598e-07!GO:0065002;intracellular protein transport across a membrane;3.08666240862186e-07!GO:0016564;transcription repressor activity;3.09423610080152e-07!GO:0051276;chromosome organization and biogenesis;3.44214386647189e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.49037146085525e-07!GO:0019222;regulation of metabolic process;3.7426877590952e-07!GO:0043566;structure-specific DNA binding;4.45708401257666e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.84817236822799e-07!GO:0005525;GTP binding;4.91542202977581e-07!GO:0050789;regulation of biological process;5.15321924616523e-07!GO:0006461;protein complex assembly;5.27634441901775e-07!GO:0045333;cellular respiration;5.72869950926368e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.99734543318022e-07!GO:0009108;coenzyme biosynthetic process;6.6854119271528e-07!GO:0009719;response to endogenous stimulus;6.7065729667255e-07!GO:0043065;positive regulation of apoptosis;7.08615871818309e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.86292748733875e-07!GO:0043068;positive regulation of programmed cell death;1.07840842505713e-06!GO:0009967;positive regulation of signal transduction;1.11343444371157e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.16577021019269e-06!GO:0003924;GTPase activity;1.25010141379487e-06!GO:0016072;rRNA metabolic process;1.38772994602697e-06!GO:0032446;protein modification by small protein conjugation;1.48117892162326e-06!GO:0031326;regulation of cellular biosynthetic process;1.62471501913243e-06!GO:0003697;single-stranded DNA binding;1.62963520040057e-06!GO:0005793;ER-Golgi intermediate compartment;1.78721712599952e-06!GO:0006950;response to stress;1.89014864748866e-06!GO:0051028;mRNA transport;2.03145363956038e-06!GO:0005774;vacuolar membrane;2.2007656968254e-06!GO:0006364;rRNA processing;2.29375771042064e-06!GO:0016481;negative regulation of transcription;2.44879347315916e-06!GO:0016567;protein ubiquitination;2.48442774803578e-06!GO:0045259;proton-transporting ATP synthase complex;2.50491622018042e-06!GO:0006099;tricarboxylic acid cycle;2.83921053959764e-06!GO:0046356;acetyl-CoA catabolic process;2.83921053959764e-06!GO:0006752;group transfer coenzyme metabolic process;3.36490906298139e-06!GO:0006917;induction of apoptosis;3.89235056378258e-06!GO:0009889;regulation of biosynthetic process;4.18639709737809e-06!GO:0022402;cell cycle process;4.21357620234681e-06!GO:0009892;negative regulation of metabolic process;4.33031207875005e-06!GO:0050790;regulation of catalytic activity;4.47209274247326e-06!GO:0051187;cofactor catabolic process;4.94789974937556e-06!GO:0048522;positive regulation of cellular process;5.22287674337243e-06!GO:0007005;mitochondrion organization and biogenesis;5.36515532266452e-06!GO:0044440;endosomal part;5.51239409746877e-06!GO:0010008;endosome membrane;5.51239409746877e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.76152699735588e-06!GO:0046930;pore complex;5.77793735059796e-06!GO:0005789;endoplasmic reticulum membrane;5.86271937030858e-06!GO:0012502;induction of programmed cell death;5.98033558431957e-06!GO:0006084;acetyl-CoA metabolic process;6.83139469847006e-06!GO:0016740;transferase activity;7.6031562308806e-06!GO:0009117;nucleotide metabolic process;8.17786910100348e-06!GO:0007264;small GTPase mediated signal transduction;8.18802635876901e-06!GO:0044437;vacuolar part;8.7441781850049e-06!GO:0008047;enzyme activator activity;8.90475642314461e-06!GO:0016779;nucleotidyltransferase activity;1.01481331055531e-05!GO:0032561;guanyl ribonucleotide binding;1.08435191354878e-05!GO:0019001;guanyl nucleotide binding;1.08435191354878e-05!GO:0000245;spliceosome assembly;1.1398704619728e-05!GO:0016563;transcription activator activity;1.1398704619728e-05!GO:0005765;lysosomal membrane;1.30924538065688e-05!GO:0048475;coated membrane;1.36662099234422e-05!GO:0030117;membrane coat;1.36662099234422e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.447274598321e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.447274598321e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.447274598321e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.67976487847202e-05!GO:0031323;regulation of cellular metabolic process;1.81603875413606e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.9787906514766e-05!GO:0030120;vesicle coat;2.04243629695666e-05!GO:0030662;coated vesicle membrane;2.04243629695666e-05!GO:0009109;coenzyme catabolic process;2.28362074898385e-05!GO:0043038;amino acid activation;2.32357046345631e-05!GO:0006418;tRNA aminoacylation for protein translation;2.32357046345631e-05!GO:0043039;tRNA aminoacylation;2.32357046345631e-05!GO:0019899;enzyme binding;2.34383662500447e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.42560107514614e-05!GO:0006613;cotranslational protein targeting to membrane;2.65719894124112e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.25515037673988e-05!GO:0048518;positive regulation of biological process;3.29559334711399e-05!GO:0008654;phospholipid biosynthetic process;3.33582795646709e-05!GO:0006401;RNA catabolic process;4.11626786338825e-05!GO:0000151;ubiquitin ligase complex;4.61492835089836e-05!GO:0016044;membrane organization and biogenesis;5.11403086854466e-05!GO:0051336;regulation of hydrolase activity;5.96318563655778e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.16384652581885e-05!GO:0003724;RNA helicase activity;6.1859000428703e-05!GO:0031252;leading edge;6.32232750717532e-05!GO:0044262;cellular carbohydrate metabolic process;6.57229600452868e-05!GO:0016197;endosome transport;6.67408197952408e-05!GO:0065007;biological regulation;6.70442173612942e-05!GO:0031982;vesicle;6.76700309430062e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.87889117684162e-05!GO:0015399;primary active transmembrane transporter activity;7.87889117684162e-05!GO:0003714;transcription corepressor activity;8.39088424268463e-05!GO:0065004;protein-DNA complex assembly;8.39088424268463e-05!GO:0005694;chromosome;0.000106115905035421!GO:0031902;late endosome membrane;0.000115137426603509!GO:0006333;chromatin assembly or disassembly;0.000115710379914384!GO:0051168;nuclear export;0.000116093582940481!GO:0005885;Arp2/3 protein complex;0.000150358946352585!GO:0008234;cysteine-type peptidase activity;0.000150770908028204!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00015768209736345!GO:0005762;mitochondrial large ribosomal subunit;0.00020893796430627!GO:0000315;organellar large ribosomal subunit;0.00020893796430627!GO:0006612;protein targeting to membrane;0.000224061475174414!GO:0010468;regulation of gene expression;0.000230948378913875!GO:0043021;ribonucleoprotein binding;0.000233408642807132!GO:0007034;vacuolar transport;0.000234368871427067!GO:0003729;mRNA binding;0.000245866994200762!GO:0015992;proton transport;0.000248379295502145!GO:0006818;hydrogen transport;0.000262479660408108!GO:0031410;cytoplasmic vesicle;0.000285750008467485!GO:0008632;apoptotic program;0.000289418254807043!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000362023171722646!GO:0007050;cell cycle arrest;0.000362023171722646!GO:0022890;inorganic cation transmembrane transporter activity;0.000370211082519569!GO:0006091;generation of precursor metabolites and energy;0.000392951910283652!GO:0005096;GTPase activator activity;0.000405908113694232!GO:0031988;membrane-bound vesicle;0.000469994807990686!GO:0030695;GTPase regulator activity;0.000484609305576205!GO:0006402;mRNA catabolic process;0.000534981683073581!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000558415434067683!GO:0005667;transcription factor complex;0.000580104831936642!GO:0008186;RNA-dependent ATPase activity;0.000582655094745456!GO:0003690;double-stranded DNA binding;0.000590925414100657!GO:0005798;Golgi-associated vesicle;0.000609964532468584!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000610143247811867!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00062144652605696!GO:0051427;hormone receptor binding;0.000646844632180797!GO:0009165;nucleotide biosynthetic process;0.000648263145150595!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000681942960403216!GO:0005769;early endosome;0.000691464708583173!GO:0000785;chromatin;0.000739437018655168!GO:0009607;response to biotic stimulus;0.000766055408981695!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000785377117664509!GO:0044427;chromosomal part;0.000833177064935747!GO:0032940;secretion by cell;0.000890062217264588!GO:0006260;DNA replication;0.000936608264950258!GO:0043623;cellular protein complex assembly;0.00100994928129938!GO:0016023;cytoplasmic membrane-bound vesicle;0.00101286738866391!GO:0007040;lysosome organization and biogenesis;0.00104142641666659!GO:0002376;immune system process;0.00104663867763039!GO:0016491;oxidoreductase activity;0.00105665907161539!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00111902306582554!GO:0035257;nuclear hormone receptor binding;0.00112608336230815!GO:0043492;ATPase activity, coupled to movement of substances;0.0011286826719835!GO:0007265;Ras protein signal transduction;0.00114667619172413!GO:0045892;negative regulation of transcription, DNA-dependent;0.0011538412915322!GO:0044431;Golgi apparatus part;0.00117648024385995!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00118809976866419!GO:0007041;lysosomal transport;0.00119708946251754!GO:0006350;transcription;0.00141846550554444!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00141846550554444!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00141846550554444!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00141846550554444!GO:0005813;centrosome;0.00145435213598081!GO:0045454;cell redox homeostasis;0.00146463189234444!GO:0004004;ATP-dependent RNA helicase activity;0.00153023038886038!GO:0009966;regulation of signal transduction;0.00153023038886038!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00156756381093801!GO:0046489;phosphoinositide biosynthetic process;0.00161362819938113!GO:0042613;MHC class II protein complex;0.00163031113414375!GO:0046474;glycerophospholipid biosynthetic process;0.00163095253750109!GO:0004674;protein serine/threonine kinase activity;0.00163095253750109!GO:0046822;regulation of nucleocytoplasmic transport;0.00180908552486477!GO:0019843;rRNA binding;0.00187556221105552!GO:0006414;translational elongation;0.00187556221105552!GO:0030384;phosphoinositide metabolic process;0.00193098419548599!GO:0001726;ruffle;0.00198423832124297!GO:0000314;organellar small ribosomal subunit;0.00210737499512169!GO:0005763;mitochondrial small ribosomal subunit;0.00210737499512169!GO:0005741;mitochondrial outer membrane;0.00222810793612274!GO:0043681;protein import into mitochondrion;0.00227800469252379!GO:0015980;energy derivation by oxidation of organic compounds;0.00228524021535608!GO:0043087;regulation of GTPase activity;0.0023609472483793!GO:0016363;nuclear matrix;0.00241802927498169!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0025763796346189!GO:0006650;glycerophospholipid metabolic process;0.00263543673261074!GO:0006897;endocytosis;0.00266078136824737!GO:0010324;membrane invagination;0.00266078136824737!GO:0051090;regulation of transcription factor activity;0.0027512669435678!GO:0046467;membrane lipid biosynthetic process;0.00283203438986245!GO:0048468;cell development;0.00284465438286832!GO:0019318;hexose metabolic process;0.00286495488872657!GO:0004197;cysteine-type endopeptidase activity;0.00295690086788418!GO:0051252;regulation of RNA metabolic process;0.00295690086788418!GO:0007033;vacuole organization and biogenesis;0.0029651264607232!GO:0009893;positive regulation of metabolic process;0.00303610408304187!GO:0003899;DNA-directed RNA polymerase activity;0.00324882358336988!GO:0001816;cytokine production;0.00325280097000918!GO:0005996;monosaccharide metabolic process;0.0033698721281881!GO:0033116;ER-Golgi intermediate compartment membrane;0.00339254963010746!GO:0031072;heat shock protein binding;0.00364526238286658!GO:0046519;sphingoid metabolic process;0.00388745376414358!GO:0006891;intra-Golgi vesicle-mediated transport;0.00414080074785003!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00431325566688342!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00431325566688342!GO:0006672;ceramide metabolic process;0.00435702291957965!GO:0005975;carbohydrate metabolic process;0.00451624923868973!GO:0005815;microtubule organizing center;0.00456769057995372!GO:0046483;heterocycle metabolic process;0.00476774895368548!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00505141085730591!GO:0006611;protein export from nucleus;0.00513229511460042!GO:0006383;transcription from RNA polymerase III promoter;0.00517114744556374!GO:0005083;small GTPase regulator activity;0.00517114744556374!GO:0043488;regulation of mRNA stability;0.00517114744556374!GO:0043487;regulation of RNA stability;0.00517114744556374!GO:0043281;regulation of caspase activity;0.0053023745125992!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00543171199108684!GO:0006643;membrane lipid metabolic process;0.00546565223625657!GO:0048500;signal recognition particle;0.00546565223625657!GO:0008033;tRNA processing;0.00560624383908174!GO:0016251;general RNA polymerase II transcription factor activity;0.00564364704136343!GO:0005637;nuclear inner membrane;0.00570128385093495!GO:0031968;organelle outer membrane;0.00585279000414765!GO:0003746;translation elongation factor activity;0.00591632182449213!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00647415282181289!GO:0046983;protein dimerization activity;0.00680330421881779!GO:0006626;protein targeting to mitochondrion;0.00684769302853082!GO:0042802;identical protein binding;0.00684769302853082!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00691649788481468!GO:0031497;chromatin assembly;0.00720255311122252!GO:0045045;secretory pathway;0.00735497283677562!GO:0007006;mitochondrial membrane organization and biogenesis;0.00752878467822092!GO:0019867;outer membrane;0.0076250168538831!GO:0003725;double-stranded RNA binding;0.00787269944562152!GO:0051539;4 iron, 4 sulfur cluster binding;0.0080245363060392!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00804809816246222!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00863131476542056!GO:0045047;protein targeting to ER;0.00863131476542056!GO:0000287;magnesium ion binding;0.00923876883299273!GO:0008312;7S RNA binding;0.00925162845864662!GO:0000139;Golgi membrane;0.00925162845864662!GO:0051789;response to protein stimulus;0.00934151251509943!GO:0006986;response to unfolded protein;0.00934151251509943!GO:0051540;metal cluster binding;0.00940273682291684!GO:0051536;iron-sulfur cluster binding;0.00940273682291684!GO:0051920;peroxiredoxin activity;0.0095721958461917!GO:0051223;regulation of protein transport;0.00966655400593606!GO:0006334;nucleosome assembly;0.00973965636848137!GO:0030867;rough endoplasmic reticulum membrane;0.00975352436207375!GO:0006261;DNA-dependent DNA replication;0.00987982427775974!GO:0005684;U2-dependent spliceosome;0.00993840023763517!GO:0019883;antigen processing and presentation of endogenous antigen;0.0107491679403866!GO:0030041;actin filament polymerization;0.0108517147079665!GO:0031625;ubiquitin protein ligase binding;0.011032566833897!GO:0006919;caspase activation;0.0110563665898668!GO:0032318;regulation of Ras GTPase activity;0.011245891393757!GO:0030036;actin cytoskeleton organization and biogenesis;0.0114047429475581!GO:0000278;mitotic cell cycle;0.0115387023539414!GO:0008270;zinc ion binding;0.0116595352942991!GO:0004177;aminopeptidase activity;0.0118301911288426!GO:0008637;apoptotic mitochondrial changes;0.0119281198668616!GO:0006352;transcription initiation;0.0119281198668616!GO:0016853;isomerase activity;0.0119281198668616!GO:0030663;COPI coated vesicle membrane;0.01227532583638!GO:0030126;COPI vesicle coat;0.01227532583638!GO:0005048;signal sequence binding;0.0122959717068458!GO:0048487;beta-tubulin binding;0.0124766638865526!GO:0043433;negative regulation of transcription factor activity;0.0124921486870427!GO:0003711;transcription elongation regulator activity;0.0126157451585359!GO:0006914;autophagy;0.012840411006962!GO:0031325;positive regulation of cellular metabolic process;0.0130136555112936!GO:0051087;chaperone binding;0.0132197241970309!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0134037195710929!GO:0018193;peptidyl-amino acid modification;0.0134037195710929!GO:0048002;antigen processing and presentation of peptide antigen;0.0134145105287475!GO:0043280;positive regulation of caspase activity;0.0136889311429334!GO:0030118;clathrin coat;0.0140137909373188!GO:0006955;immune response;0.0140519423987795!GO:0030693;caspase activity;0.0142142568374017!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0144379817598089!GO:0030176;integral to endoplasmic reticulum membrane;0.014819086416915!GO:0004518;nuclease activity;0.0149546487582154!GO:0005869;dynactin complex;0.0149546487582154!GO:0033033;negative regulation of myeloid cell apoptosis;0.0149546487582154!GO:0001803;regulation of type III hypersensitivity;0.0149546487582154!GO:0032733;positive regulation of interleukin-10 production;0.0149546487582154!GO:0033025;regulation of mast cell apoptosis;0.0149546487582154!GO:0001805;positive regulation of type III hypersensitivity;0.0149546487582154!GO:0033023;mast cell homeostasis;0.0149546487582154!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0149546487582154!GO:0033032;regulation of myeloid cell apoptosis;0.0149546487582154!GO:0001802;type III hypersensitivity;0.0149546487582154!GO:0033028;myeloid cell apoptosis;0.0149546487582154!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0149546487582154!GO:0033026;negative regulation of mast cell apoptosis;0.0149546487582154!GO:0033024;mast cell apoptosis;0.0149546487582154!GO:0043022;ribosome binding;0.0149554701801829!GO:0015036;disulfide oxidoreductase activity;0.0150988446095427!GO:0030658;transport vesicle membrane;0.0151081999263317!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0153038673345944!GO:0015002;heme-copper terminal oxidase activity;0.0153038673345944!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0153038673345944!GO:0004129;cytochrome-c oxidase activity;0.0153038673345944!GO:0046966;thyroid hormone receptor binding;0.0154014036529294!GO:0000209;protein polyubiquitination;0.0155092623733667!GO:0051098;regulation of binding;0.0157590591508653!GO:0045941;positive regulation of transcription;0.0158496328718874!GO:0000118;histone deacetylase complex;0.0158496328718874!GO:0006607;NLS-bearing substrate import into nucleus;0.0158496328718874!GO:0032763;regulation of mast cell cytokine production;0.0160943710134228!GO:0032762;mast cell cytokine production;0.0160943710134228!GO:0008624;induction of apoptosis by extracellular signals;0.0167500810293931!GO:0045792;negative regulation of cell size;0.0169118693118552!GO:0008333;endosome to lysosome transport;0.0170017743624184!GO:0006506;GPI anchor biosynthetic process;0.017791854165539!GO:0005788;endoplasmic reticulum lumen;0.0179705809357555!GO:0006740;NADPH regeneration;0.0180380007193099!GO:0006098;pentose-phosphate shunt;0.0180380007193099!GO:0033157;regulation of intracellular protein transport;0.0187190395064098!GO:0042306;regulation of protein import into nucleus;0.0187190395064098!GO:0046914;transition metal ion binding;0.0187360595968191!GO:0004185;serine carboxypeptidase activity;0.0188366129283635!GO:0032981;mitochondrial respiratory chain complex I assembly;0.018975382403563!GO:0010257;NADH dehydrogenase complex assembly;0.018975382403563!GO:0033108;mitochondrial respiratory chain complex assembly;0.018975382403563!GO:0001817;regulation of cytokine production;0.0190641383816713!GO:0016272;prefoldin complex;0.0191465823762344!GO:0016584;nucleosome positioning;0.0192611253726708!GO:0017091;AU-rich element binding;0.0193205313036308!GO:0050779;RNA destabilization;0.0193205313036308!GO:0000289;poly(A) tail shortening;0.0193205313036308!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0193346756082827!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0193346756082827!GO:0009126;purine nucleoside monophosphate metabolic process;0.0193346756082827!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0193346756082827!GO:0002467;germinal center formation;0.0193483723939999!GO:0006376;mRNA splice site selection;0.0194430911477704!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0194430911477704!GO:0002757;immune response-activating signal transduction;0.019742562469171!GO:0030308;negative regulation of cell growth;0.0199126335333525!GO:0030137;COPI-coated vesicle;0.0199335708667109!GO:0006213;pyrimidine nucleoside metabolic process;0.019996989264777!GO:0006405;RNA export from nucleus;0.0203969043693655!GO:0019882;antigen processing and presentation;0.0204775688631455!GO:0006839;mitochondrial transport;0.021138190318311!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.021138190318311!GO:0045893;positive regulation of transcription, DNA-dependent;0.0214468131216678!GO:0006497;protein amino acid lipidation;0.0216468771652973!GO:0009116;nucleoside metabolic process;0.0217119111185563!GO:0009161;ribonucleoside monophosphate metabolic process;0.021826003877535!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.021826003877535!GO:0006458;'de novo' protein folding;0.0218559975855182!GO:0051084;'de novo' posttranslational protein folding;0.0218559975855182!GO:0006007;glucose catabolic process;0.0218911704685119!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0220730051881048!GO:0043621;protein self-association;0.0222668006879018!GO:0030258;lipid modification;0.0222843943064892!GO:0004218;cathepsin S activity;0.0222858747944449!GO:0016788;hydrolase activity, acting on ester bonds;0.0222858747944449!GO:0030027;lamellipodium;0.0226260290039853!GO:0047485;protein N-terminus binding;0.0226489155005649!GO:0008180;signalosome;0.0228318196839053!GO:0051235;maintenance of localization;0.0233432889557011!GO:0004722;protein serine/threonine phosphatase activity;0.0233432889557011!GO:0050811;GABA receptor binding;0.0236590513345361!GO:0051325;interphase;0.0244563076215595!GO:0016859;cis-trans isomerase activity;0.0245764345000484!GO:0009112;nucleobase metabolic process;0.0246271414606101!GO:0006595;polyamine metabolic process;0.024708400548803!GO:0016605;PML body;0.0247361266784589!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0248193998749069!GO:0051338;regulation of transferase activity;0.0255884888224594!GO:0005669;transcription factor TFIID complex;0.025604671523981!GO:0045926;negative regulation of growth;0.0257359961779731!GO:0003727;single-stranded RNA binding;0.026485369624388!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0266885578623754!GO:0030149;sphingolipid catabolic process;0.0267445442907224!GO:0051329;interphase of mitotic cell cycle;0.0267445442907224!GO:0006289;nucleotide-excision repair;0.0269084992807587!GO:0033367;protein localization in mast cell secretory granule;0.0269084992807587!GO:0033365;protein localization in organelle;0.0269084992807587!GO:0033371;T cell secretory granule organization and biogenesis;0.0269084992807587!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0269084992807587!GO:0033375;protease localization in T cell secretory granule;0.0269084992807587!GO:0042629;mast cell granule;0.0269084992807587!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0269084992807587!GO:0033364;mast cell secretory granule organization and biogenesis;0.0269084992807587!GO:0033380;granzyme B localization in T cell secretory granule;0.0269084992807587!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0269084992807587!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0269084992807587!GO:0033368;protease localization in mast cell secretory granule;0.0269084992807587!GO:0033366;protein localization in secretory granule;0.0269084992807587!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0269084992807587!GO:0033374;protein localization in T cell secretory granule;0.0269084992807587!GO:0032640;tumor necrosis factor production;0.0270154544368093!GO:0045449;regulation of transcription;0.0275449764442032!GO:0006354;RNA elongation;0.0275723248028869!GO:0008656;caspase activator activity;0.0276720357219616!GO:0000049;tRNA binding;0.0278878235704669!GO:0032774;RNA biosynthetic process;0.0280680607708401!GO:0043549;regulation of kinase activity;0.0281033962684196!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0285079473404959!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0285231114431878!GO:0051101;regulation of DNA binding;0.0287198097439276!GO:0045947;negative regulation of translational initiation;0.028794431481007!GO:0006509;membrane protein ectodomain proteolysis;0.0294173235980296!GO:0033619;membrane protein proteolysis;0.0294173235980296!GO:0006644;phospholipid metabolic process;0.0295445098685986!GO:0008168;methyltransferase activity;0.0296493191467724!GO:0016741;transferase activity, transferring one-carbon groups;0.0296493191467724!GO:0006351;transcription, DNA-dependent;0.0300385333118331!GO:0030660;Golgi-associated vesicle membrane;0.0303433554492857!GO:0044452;nucleolar part;0.0308070354580603!GO:0001819;positive regulation of cytokine production;0.0313332760729506!GO:0031901;early endosome membrane;0.0317545678576393!GO:0006302;double-strand break repair;0.0318780492370305!GO:0008629;induction of apoptosis by intracellular signals;0.0318908220587502!GO:0009119;ribonucleoside metabolic process;0.0322413868265659!GO:0051345;positive regulation of hydrolase activity;0.0322413868265659!GO:0016301;kinase activity;0.0324611195328948!GO:0002764;immune response-regulating signal transduction;0.0326343270347396!GO:0032760;positive regulation of tumor necrosis factor production;0.0327473109991679!GO:0005099;Ras GTPase activator activity;0.032895915597724!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0336156576426987!GO:0051092;activation of NF-kappaB transcription factor;0.033778657421885!GO:0019864;IgG binding;0.034046617360935!GO:0016791;phosphoric monoester hydrolase activity;0.034085398803953!GO:0030503;regulation of cell redox homeostasis;0.0343413903380581!GO:0000305;response to oxygen radical;0.0343413903380581!GO:0008538;proteasome activator activity;0.0344932058571342!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0346193770755227!GO:0005832;chaperonin-containing T-complex;0.0346802073212463!GO:0008320;protein transmembrane transporter activity;0.0350414408842644!GO:0005057;receptor signaling protein activity;0.0350946991611759!GO:0019377;glycolipid catabolic process;0.0362387023030292!GO:0042611;MHC protein complex;0.0362417941373077!GO:0048471;perinuclear region of cytoplasm;0.0362840259910117!GO:0000303;response to superoxide;0.0365521990579006!GO:0033673;negative regulation of kinase activity;0.0366194135605723!GO:0006469;negative regulation of protein kinase activity;0.0366194135605723!GO:0007021;tubulin folding;0.0366448934403216!GO:0000339;RNA cap binding;0.0368427627566618!GO:0030518;steroid hormone receptor signaling pathway;0.0369117626871171!GO:0006013;mannose metabolic process;0.0369117626871171!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0373557214190548!GO:0008139;nuclear localization sequence binding;0.0373736308112494!GO:0051059;NF-kappaB binding;0.0382963698688598!GO:0042990;regulation of transcription factor import into nucleus;0.0386166507534544!GO:0042991;transcription factor import into nucleus;0.0386166507534544!GO:0030119;AP-type membrane coat adaptor complex;0.0391572187033642!GO:0001836;release of cytochrome c from mitochondria;0.0391963728046089!GO:0008287;protein serine/threonine phosphatase complex;0.0396247790479347!GO:0019783;small conjugating protein-specific protease activity;0.0397893449924414!GO:0004527;exonuclease activity;0.0397920797477196!GO:0051707;response to other organism;0.0398816369663409!GO:0043300;regulation of leukocyte degranulation;0.0399986246762549!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0400116624143904!GO:0006505;GPI anchor metabolic process;0.0404637399840642!GO:0030099;myeloid cell differentiation;0.0412545006140505!GO:0030833;regulation of actin filament polymerization;0.0414586908025343!GO:0002274;myeloid leukocyte activation;0.0419548257992494!GO:0045859;regulation of protein kinase activity;0.0422781396139097!GO:0015923;mannosidase activity;0.0422781396139097!GO:0006006;glucose metabolic process;0.0423653534812105!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0424213040232912!GO:0016311;dephosphorylation;0.0442200247226386!GO:0045185;maintenance of protein localization;0.0442200247226386!GO:0002224;toll-like receptor signaling pathway;0.0442991021362138!GO:0002221;pattern recognition receptor signaling pathway;0.0442991021362138!GO:0001891;phagocytic cup;0.0442991021362138!GO:0000726;non-recombinational repair;0.0444611170715384!GO:0045309;protein phosphorylated amino acid binding;0.0447225674540092!GO:0006733;oxidoreduction coenzyme metabolic process;0.0458579545241797!GO:0030218;erythrocyte differentiation;0.0458746746773595!GO:0004843;ubiquitin-specific protease activity;0.0463444723681554!GO:0030880;RNA polymerase complex;0.0463444723681554!GO:0019752;carboxylic acid metabolic process;0.0464053083944555!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0470561921763257!GO:0030127;COPII vesicle coat;0.0472406319739525!GO:0012507;ER to Golgi transport vesicle membrane;0.0472406319739525!GO:0040029;regulation of gene expression, epigenetic;0.0473396835490782!GO:0042158;lipoprotein biosynthetic process;0.0477463712365365!GO:0006778;porphyrin metabolic process;0.0479019073743302!GO:0033013;tetrapyrrole metabolic process;0.0479019073743302!GO:0031647;regulation of protein stability;0.0481743326060174!GO:0000082;G1/S transition of mitotic cell cycle;0.0484336162047483!GO:0022884;macromolecule transmembrane transporter activity;0.0486473231603612!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0486473231603612!GO:0004659;prenyltransferase activity;0.0487053770104302!GO:0045637;regulation of myeloid cell differentiation;0.0488617640008907!GO:0008097;5S rRNA binding;0.0491869372988428!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0491869372988428 | |||
|sample_id=11801 | |sample_id=11801 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=NFIL3:2.92818930641;SPIB:2.80457321506;SPI1:2.6659940963;IRF1,2:2.41615908422;NANOG{mouse}:2.26036746124;NFKB1_REL_RELA:2.17678732176;PAX2:2.1421770002;ETS1,2:2.03308674528;HMX1:1.97468732;ATF5_CREB3:1.92964020927;IRF7:1.81906063861;EP300:1.75273360733;DMAP1_NCOR{1,2}_SMARC:1.7479614368;TGIF1:1.71953815186;RUNX1..3:1.70621650153;ELF1,2,4:1.67615512262;MAFB:1.57120088577;SREBF1,2:1.52710294801;CEBPA,B_DDIT3:1.51108136544;FOXN1:1.4993130571;RFX2..5_RFXANK_RFXAP:1.46811361159;CREB1:1.38329128722;FOXP3:1.19858810346;FOXO1,3,4:1.1933882352;ATF4:1.17278215757;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15558623337;ESRRA:1.15426006835;PAX8:1.14292432194;GLI1..3:1.06585936546;HLF:1.03634845796;BACH2:0.987632095566;FOSL2:0.96265923676;ALX4:0.934934199555;ESR1:0.901724587124;FOS_FOS{B,L1}_JUN{B,D}:0.888581838413;TLX2:0.850158023801;RXRA_VDR{dimer}:0.829327254185;JUN:0.792846992305;HES1:0.775269794761;HMGA1,2:0.763628718964;NR6A1:0.726971421023;NFE2:0.722699207926;HOXA9_MEIS1:0.607132111647;PAX3,7:0.528818604637;HIF1A:0.496275157917;BPTF:0.457001487612;FOX{D1,D2}:0.452203079811;CDX1,2,4:0.388455147489;ATF2:0.359200377273;ATF6:0.354648449009;NFE2L2:0.260526024065;HBP1_HMGB_SSRP1_UBTF:0.238282521535;TAL1_TCF{3,4,12}:0.218971786411;MEF2{A,B,C,D}:0.217441954446;STAT2,4,6:0.182117493879;HOX{A5,B5}:0.166676141224;FOX{F1,F2,J1}:0.107806924309;NFE2L1:0.0697348098209;EN1,2:0.0540754127206;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0535577935353;AHR_ARNT_ARNT2:0.034728604237;OCT4_SOX2{dimer}:0.0316524247101;FOXQ1:0.00263183683088;ALX1:-0.00349156577378;HNF4A_NR2F1,2:-0.015600686889;HSF1,2:-0.0399431325351;RBPJ:-0.0474249176496;ZNF148:-0.0593055673406;FOXA2:-0.0681532138387;POU5F1:-0.0779376705542;STAT1,3:-0.10039881133;GATA4:-0.171137005516;PPARG:-0.18017454108;SRF:-0.181727470594;ZBTB16:-0.191713223553;EBF1:-0.209018206047;T:-0.215334938055;TFCP2:-0.234541244063;NR1H4:-0.257070307314;RXR{A,B,G}:-0.279308597994;FOXD3:-0.281414440875;RORA:-0.293152231715;POU2F1..3:-0.313203248586;MYB:-0.318498171187;PAX4:-0.343462297274;FOX{I1,J2}:-0.359951861787;ELK1,4_GABP{A,B1}:-0.361856494118;NKX2-2,8:-0.372241624956;GATA6:-0.378123859058;CRX:-0.385767603845;SPZ1:-0.407524775225;NR5A1,2:-0.433685448668;FOXP1:-0.434195493786;IKZF2:-0.449531258494;NFATC1..3:-0.450736657278;TFAP4:-0.458158034838;PAX1,9:-0.471621092318;SOX2:-0.486261390942;STAT5{A,B}:-0.534392128321;XBP1:-0.550177446699;VSX1,2:-0.5533046662;RFX1:-0.599434465448;PITX1..3:-0.601968339543;NHLH1,2:-0.603246772964;PRRX1,2:-0.603589537403;NANOG:-0.622382567176;PRDM1:-0.648076006778;MYFfamily:-0.659325445499;NKX3-1:-0.698535295967;TFAP2{A,C}:-0.723395149159;BREu{core}:-0.730960406737;REST:-0.783328389595;HNF1A:-0.798155194501;NKX2-3_NKX2-5:-0.829822816509;GCM1,2:-0.848837778166;IKZF1:-0.859534904299;MTF1:-0.879602236158;GZF1:-0.882783769919;MYOD1:-0.883609216644;FOXL1:-0.947901585622;EGR1..3:-0.955068667973;ZNF238:-0.957252249337;DBP:-0.965811023349;PAX5:-0.972261723994;TOPORS:-0.993768169233;ZIC1..3:-0.994242217919;E2F1..5:-1.00586000796;SMAD1..7,9:-1.01072583083;ADNP_IRX_SIX_ZHX:-1.01095411964;SOX{8,9,10}:-1.01133912748;RREB1:-1.0392870062;CUX2:-1.0719519781;ZEB1:-1.07645507887;PATZ1:-1.09649219473;YY1:-1.10443891154;MZF1:-1.10879366353;NFIX:-1.11972678268;NKX3-2:-1.12087863897;ZNF423:-1.13339184582;SOX5:-1.13878428101;PBX1:-1.14687286545;KLF4:-1.15218156132;SP1:-1.15491564054;HOX{A4,D4}:-1.1748368283;PDX1:-1.1791530227;MTE{core}:-1.18440110628;TBP:-1.19219350414;ZFP161:-1.215993822;AR:-1.24974703148;NFY{A,B,C}:-1.24981470234;MED-1{core}:-1.27520410488;TFAP2B:-1.2877179677;AIRE:-1.31249692568;NKX2-1,4:-1.33250092452;NKX6-1,2:-1.33424931726;LEF1_TCF7_TCF7L1,2:-1.34166746944;TP53:-1.36296766183;TLX1..3_NFIC{dimer}:-1.37720572204;ZBTB6:-1.37917906582;HOX{A6,A7,B6,B7}:-1.40944786441;bHLH_family:-1.41589384455;NR3C1:-1.42003776923;SNAI1..3:-1.42600388261;MYBL2:-1.43771592794;FOXM1:-1.44804766998;LHX3,4:-1.51063987426;MAZ:-1.5190392166;XCPE1{core}:-1.54258304099;TEAD1:-1.56102609924;EVI1:-1.5827531952;TFDP1:-1.59511014273;GTF2I:-1.59719315219;UFEwm:-1.60466135858;NRF1:-1.6145475072;HIC1:-1.62263089426;PAX6:-1.64902133252;ARID5B:-1.70486360245;LMO2:-1.70973187528;TBX4,5:-1.71021421895;ZNF384:-1.73385455171;GTF2A1,2:-1.74131224356;GFI1B:-1.75904052032;GFI1:-1.76421461984;POU1F1:-1.78985714683;ZNF143:-1.7905260872;CDC5L:-1.79999623995;ONECUT1,2:-1.8056510396;TEF:-1.85704247845;HAND1,2:-1.93170570505;POU6F1:-1.97160088316;SOX17:-2.06455267811;POU3F1..4:-2.55776597823 | |top_motifs=NFIL3:2.92818930641;SPIB:2.80457321506;SPI1:2.6659940963;IRF1,2:2.41615908422;NANOG{mouse}:2.26036746124;NFKB1_REL_RELA:2.17678732176;PAX2:2.1421770002;ETS1,2:2.03308674528;HMX1:1.97468732;ATF5_CREB3:1.92964020927;IRF7:1.81906063861;EP300:1.75273360733;DMAP1_NCOR{1,2}_SMARC:1.7479614368;TGIF1:1.71953815186;RUNX1..3:1.70621650153;ELF1,2,4:1.67615512262;MAFB:1.57120088577;SREBF1,2:1.52710294801;CEBPA,B_DDIT3:1.51108136544;FOXN1:1.4993130571;RFX2..5_RFXANK_RFXAP:1.46811361159;CREB1:1.38329128722;FOXP3:1.19858810346;FOXO1,3,4:1.1933882352;ATF4:1.17278215757;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15558623337;ESRRA:1.15426006835;PAX8:1.14292432194;GLI1..3:1.06585936546;HLF:1.03634845796;BACH2:0.987632095566;FOSL2:0.96265923676;ALX4:0.934934199555;ESR1:0.901724587124;FOS_FOS{B,L1}_JUN{B,D}:0.888581838413;TLX2:0.850158023801;RXRA_VDR{dimer}:0.829327254185;JUN:0.792846992305;HES1:0.775269794761;HMGA1,2:0.763628718964;NR6A1:0.726971421023;NFE2:0.722699207926;HOXA9_MEIS1:0.607132111647;PAX3,7:0.528818604637;HIF1A:0.496275157917;BPTF:0.457001487612;FOX{D1,D2}:0.452203079811;CDX1,2,4:0.388455147489;ATF2:0.359200377273;ATF6:0.354648449009;NFE2L2:0.260526024065;HBP1_HMGB_SSRP1_UBTF:0.238282521535;TAL1_TCF{3,4,12}:0.218971786411;MEF2{A,B,C,D}:0.217441954446;STAT2,4,6:0.182117493879;HOX{A5,B5}:0.166676141224;FOX{F1,F2,J1}:0.107806924309;NFE2L1:0.0697348098209;EN1,2:0.0540754127206;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0535577935353;AHR_ARNT_ARNT2:0.034728604237;OCT4_SOX2{dimer}:0.0316524247101;FOXQ1:0.00263183683088;ALX1:-0.00349156577378;HNF4A_NR2F1,2:-0.015600686889;HSF1,2:-0.0399431325351;RBPJ:-0.0474249176496;ZNF148:-0.0593055673406;FOXA2:-0.0681532138387;POU5F1:-0.0779376705542;STAT1,3:-0.10039881133;GATA4:-0.171137005516;PPARG:-0.18017454108;SRF:-0.181727470594;ZBTB16:-0.191713223553;EBF1:-0.209018206047;T:-0.215334938055;TFCP2:-0.234541244063;NR1H4:-0.257070307314;RXR{A,B,G}:-0.279308597994;FOXD3:-0.281414440875;RORA:-0.293152231715;POU2F1..3:-0.313203248586;MYB:-0.318498171187;PAX4:-0.343462297274;FOX{I1,J2}:-0.359951861787;ELK1,4_GABP{A,B1}:-0.361856494118;NKX2-2,8:-0.372241624956;GATA6:-0.378123859058;CRX:-0.385767603845;SPZ1:-0.407524775225;NR5A1,2:-0.433685448668;FOXP1:-0.434195493786;IKZF2:-0.449531258494;NFATC1..3:-0.450736657278;TFAP4:-0.458158034838;PAX1,9:-0.471621092318;SOX2:-0.486261390942;STAT5{A,B}:-0.534392128321;XBP1:-0.550177446699;VSX1,2:-0.5533046662;RFX1:-0.599434465448;PITX1..3:-0.601968339543;NHLH1,2:-0.603246772964;PRRX1,2:-0.603589537403;NANOG:-0.622382567176;PRDM1:-0.648076006778;MYFfamily:-0.659325445499;NKX3-1:-0.698535295967;TFAP2{A,C}:-0.723395149159;BREu{core}:-0.730960406737;REST:-0.783328389595;HNF1A:-0.798155194501;NKX2-3_NKX2-5:-0.829822816509;GCM1,2:-0.848837778166;IKZF1:-0.859534904299;MTF1:-0.879602236158;GZF1:-0.882783769919;MYOD1:-0.883609216644;FOXL1:-0.947901585622;EGR1..3:-0.955068667973;ZNF238:-0.957252249337;DBP:-0.965811023349;PAX5:-0.972261723994;TOPORS:-0.993768169233;ZIC1..3:-0.994242217919;E2F1..5:-1.00586000796;SMAD1..7,9:-1.01072583083;ADNP_IRX_SIX_ZHX:-1.01095411964;SOX{8,9,10}:-1.01133912748;RREB1:-1.0392870062;CUX2:-1.0719519781;ZEB1:-1.07645507887;PATZ1:-1.09649219473;YY1:-1.10443891154;MZF1:-1.10879366353;NFIX:-1.11972678268;NKX3-2:-1.12087863897;ZNF423:-1.13339184582;SOX5:-1.13878428101;PBX1:-1.14687286545;KLF4:-1.15218156132;SP1:-1.15491564054;HOX{A4,D4}:-1.1748368283;PDX1:-1.1791530227;MTE{core}:-1.18440110628;TBP:-1.19219350414;ZFP161:-1.215993822;AR:-1.24974703148;NFY{A,B,C}:-1.24981470234;MED-1{core}:-1.27520410488;TFAP2B:-1.2877179677;AIRE:-1.31249692568;NKX2-1,4:-1.33250092452;NKX6-1,2:-1.33424931726;LEF1_TCF7_TCF7L1,2:-1.34166746944;TP53:-1.36296766183;TLX1..3_NFIC{dimer}:-1.37720572204;ZBTB6:-1.37917906582;HOX{A6,A7,B6,B7}:-1.40944786441;bHLH_family:-1.41589384455;NR3C1:-1.42003776923;SNAI1..3:-1.42600388261;MYBL2:-1.43771592794;FOXM1:-1.44804766998;LHX3,4:-1.51063987426;MAZ:-1.5190392166;XCPE1{core}:-1.54258304099;TEAD1:-1.56102609924;EVI1:-1.5827531952;TFDP1:-1.59511014273;GTF2I:-1.59719315219;UFEwm:-1.60466135858;NRF1:-1.6145475072;HIC1:-1.62263089426;PAX6:-1.64902133252;ARID5B:-1.70486360245;LMO2:-1.70973187528;TBX4,5:-1.71021421895;ZNF384:-1.73385455171;GTF2A1,2:-1.74131224356;GFI1B:-1.75904052032;GFI1:-1.76421461984;POU1F1:-1.78985714683;ZNF143:-1.7905260872;CDC5L:-1.79999623995;ONECUT1,2:-1.8056510396;TEF:-1.85704247845;HAND1,2:-1.93170570505;POU6F1:-1.97160088316;SOX17:-2.06455267811;POU3F1..4:-2.55776597823 | ||
|xref= | |||
}} | }} | ||
Revision as of 21:14, 10 August 2017
| Name: | CD14+CD16+ Monocytes, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13208 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13208
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13208
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.14 |
| 10 | 10 | 0.0245 |
| 100 | 100 | 0.992 |
| 101 | 101 | 0.753 |
| 102 | 102 | 0.652 |
| 103 | 103 | 0.262 |
| 104 | 104 | 0.531 |
| 105 | 105 | 0.126 |
| 106 | 106 | 0.00534 |
| 107 | 107 | 0.437 |
| 108 | 108 | 0.707 |
| 109 | 109 | 0.0479 |
| 11 | 11 | 0.183 |
| 110 | 110 | 0.235 |
| 111 | 111 | 0.0335 |
| 112 | 112 | 0.226 |
| 113 | 113 | 0.612 |
| 114 | 114 | 0.014 |
| 115 | 115 | 0.185 |
| 116 | 116 | 0.956 |
| 117 | 117 | 0.0289 |
| 118 | 118 | 0.0852 |
| 119 | 119 | 0.331 |
| 12 | 12 | 0.272 |
| 120 | 120 | 0.7 |
| 121 | 121 | 0.688 |
| 122 | 122 | 0.596 |
| 123 | 123 | 0.0291 |
| 124 | 124 | 0.93 |
| 125 | 125 | 0.147 |
| 126 | 126 | 0.13 |
| 127 | 127 | 0.33 |
| 128 | 128 | 0.0909 |
| 129 | 129 | 0.962 |
| 13 | 13 | 0.0784 |
| 130 | 130 | 0.432 |
| 131 | 131 | 0.831 |
| 132 | 132 | 0.0339 |
| 133 | 133 | 0.443 |
| 134 | 134 | 0.686 |
| 135 | 135 | 0.119 |
| 136 | 136 | 0.739 |
| 137 | 137 | 4.57357e-4 |
| 138 | 138 | 0.245 |
| 139 | 139 | 0.0493 |
| 14 | 14 | 0.41 |
| 140 | 140 | 0.151 |
| 141 | 141 | 0.65 |
| 142 | 142 | 0.517 |
| 143 | 143 | 0.123 |
| 144 | 144 | 0.865 |
| 145 | 145 | 0.554 |
| 146 | 146 | 0.897 |
| 147 | 147 | 0.46 |
| 148 | 148 | 0.00904 |
| 149 | 149 | 0.668 |
| 15 | 15 | 0.14 |
| 150 | 150 | 0.504 |
| 151 | 151 | 0.327 |
| 152 | 152 | 0.215 |
| 153 | 153 | 0.91 |
| 154 | 154 | 0.897 |
| 155 | 155 | 0.199 |
| 156 | 156 | 0.949 |
| 157 | 157 | 0.951 |
| 158 | 158 | 0.0918 |
| 159 | 159 | 0.416 |
| 16 | 16 | 0.413 |
| 160 | 160 | 0.439 |
| 161 | 161 | 0.422 |
| 162 | 162 | 0.428 |
| 163 | 163 | 0.933 |
| 164 | 164 | 0.0934 |
| 165 | 165 | 0.0461 |
| 166 | 166 | 0.532 |
| 167 | 167 | 0.134 |
| 168 | 168 | 0.206 |
| 169 | 169 | 0.0147 |
| 17 | 17 | 0.28 |
| 18 | 18 | 0.188 |
| 19 | 19 | 0.297 |
| 2 | 2 | 0.968 |
| 20 | 20 | 0.343 |
| 21 | 21 | 0.667 |
| 22 | 22 | 0.198 |
| 23 | 23 | 0.153 |
| 24 | 24 | 0.266 |
| 25 | 25 | 0.199 |
| 26 | 26 | 0.0702 |
| 27 | 27 | 0.792 |
| 28 | 28 | 0.551 |
| 29 | 29 | 0.0745 |
| 3 | 3 | 0.089 |
| 30 | 30 | 0.391 |
| 31 | 31 | 0.702 |
| 32 | 32 | 0.596 |
| 33 | 33 | 0.178 |
| 34 | 34 | 0.582 |
| 35 | 35 | 0.15 |
| 36 | 36 | 0.0487 |
| 37 | 37 | 0.0632 |
| 38 | 38 | 0.469 |
| 39 | 39 | 0.742 |
| 4 | 4 | 0.844 |
| 40 | 40 | 0.106 |
| 41 | 41 | 0.0223 |
| 42 | 42 | 0.349 |
| 43 | 43 | 0.0545 |
| 44 | 44 | 0.825 |
| 45 | 45 | 0.862 |
| 46 | 46 | 0.151 |
| 47 | 47 | 0.516 |
| 48 | 48 | 0.474 |
| 49 | 49 | 0.123 |
| 5 | 5 | 0.124 |
| 50 | 50 | 0.993 |
| 51 | 51 | 0.362 |
| 52 | 52 | 0.383 |
| 53 | 53 | 0.356 |
| 54 | 54 | 0.507 |
| 55 | 55 | 0.715 |
| 56 | 56 | 0.81 |
| 57 | 57 | 0.865 |
| 58 | 58 | 0.0704 |
| 59 | 59 | 0.112 |
| 6 | 6 | 0.886 |
| 60 | 60 | 0.0387 |
| 61 | 61 | 0.214 |
| 62 | 62 | 0.0292 |
| 63 | 63 | 0.518 |
| 64 | 64 | 0.375 |
| 65 | 65 | 0.253 |
| 66 | 66 | 0.15 |
| 67 | 67 | 0.316 |
| 68 | 68 | 0.527 |
| 69 | 69 | 0.7 |
| 7 | 7 | 0.168 |
| 70 | 70 | 0.0166 |
| 71 | 71 | 0.0358 |
| 72 | 72 | 0.223 |
| 73 | 73 | 0.121 |
| 74 | 74 | 0.044 |
| 75 | 75 | 0.0602 |
| 76 | 76 | 0.22 |
| 77 | 77 | 0.526 |
| 78 | 78 | 0.13 |
| 79 | 79 | 0.299 |
| 8 | 8 | 0.428 |
| 80 | 80 | 0.253 |
| 81 | 81 | 0.196 |
| 82 | 82 | 0.142 |
| 83 | 83 | 0.326 |
| 84 | 84 | 0.527 |
| 85 | 85 | 0.0455 |
| 86 | 86 | 0.107 |
| 87 | 87 | 0.253 |
| 88 | 88 | 0.51 |
| 89 | 89 | 0.452 |
| 9 | 9 | 0.253 |
| 90 | 90 | 0.255 |
| 91 | 91 | 0.448 |
| 92 | 92 | 0.526 |
| 93 | 93 | 0.506 |
| 94 | 94 | 0.0287 |
| 95 | 95 | 0.0595 |
| 96 | 96 | 0.319 |
| 97 | 97 | 0.856 |
| 98 | 98 | 0.0865 |
| 99 | 99 | 0.0254 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13208
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0002393 (intermediate monocyte)
0002397 (CD14-positive, CD16-positive monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011112 (CD14-positiveCD16-positive Monocytes)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
