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{{f5samples
 
{{f5samples
|DRA_sample_Accession=CAGE@DRS007892
+
|DRA_sample_Accession=CAGE@SAMD00005193
 +
|accession_numbers=CAGE;DRX007999;DRR008871;DRZ000296;DRZ001681;DRZ011646;DRZ013031
 
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
 
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
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|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
|datafreeze_phase=1
+
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
 
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.98!95.54!PAX8;;chr8:55370487..55370503,+!p1@SOX17!1.64!42.19!SOX17;;chr17:46675558..46675577,-!p2@HOXB6!1.56!35.67!HOXB6;;chr19:3574330..3574393,+!p2@HMG20B!1.34!21.09!HMG20B;;chr1:201979743..201979762,+!p1@ELF3!1.34!20.78!ELF3;;chr19:45971246..45971265,+!p1@FOSB!1.29!333.16!FOSB;;chr17:46682321..46682362,-!p1@HOXB6!1.29!18.30!HOXB6;;chr3:5021268..5021282,+!p4@BHLHE40!1.25!34.12!BHLHE40;;chr8:72756063..72756125,-!p1@MSC!1.24!32.88!MSC;;chr20:2673383..2673441,+!p1@EBF4!1.22!24.82!EBF4;;chr1:201979703..201979721,+!p2@ELF3!1.21!15.20!ELF3;;chr17:46692624..46692659,-!p3@HOXB8!1.16!13.34!HOXB8;;chr17:46687959..46688007,-!p2@HOXB7!1.14!17.68!HOXB7;;chr1:37940170..37940190,+!p1@ZC3H12A!1.13!154.48!ZC3H12A;;chr17:46688334..46688385,-!p1@HOXB7!1.11!17.06!HOXB7;;chr17:38256822..38256851,-!p1@NR1D1!1.06!83.45!NR1D1;;chr3:5021113..5021180,+!p1@BHLHE40!1.03!679.35!BHLHE40;;chr18:77155922..77155939,+!p1@NFATC1!1.02!26.37!NFATC1;;chr17:38256799..38256815,-!p3@NR1D1!1.02!17.37!NR1D1;;chr17:46692457..46692484,-!p2@HOXB8!1.01!9.31!HOXB8;;chr12:85673977..85674015,+!p1@ALX1!1.01!9.31!ALX1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.00!12.72!NFKBIZ;;chr20:50179368..50179392,-!p2@NFATC2!1.00!11.79!NFATC2;;chr17:46675420..46675465,-!p3@HOXB6!1.00!10.55!HOXB6;;chr19:48773337..48773339,+!p2@ZNF114!0.99!8.69!ZNF114;;chr17:46621937..46621966,-!p2@HOXB2!0.96!22.33!HOXB2;;chr10:64018918..64018936,+!p2@ZNF365!0.96!8.07!ZNF365;;chr13:73633131..73633149,+!p1@KLF5!0.95!88.10!KLF5;;chr17:35294075..35294102,+!p1@ENST00000559335!0.94!7.76!LHX1;;chr22:19748231..19748317,+!p1@TBX1!0.94!7.76!TBX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.93!12.72!TFAP2A;;chr14:75745523..75745537,+!p1@FOS!0.92!920.07!FOS;;chr11:61520075..61520136,+!p1@C11orf9!0.91!15.51!C11orf9;;chr17:46690839..46690884,-!p1@HOXB8!0.91!7.13!HOXB8;;chr7:63505799..63505904,+!p1@ZNF727!0.91!7.13!ZNF727;;chr14:35872453..35872485,-!p2@NFKBIA!0.90!17.68!NFKBIA;;chr6:1389789..1389821,+!p1@FOXF2!0.90!9.62!FOXF2;;chr8:49833978..49833996,-!p1@SNAI2!0.89!146.73!SNAI2;;chr1:212782094..212782109,+!p1@ATF3!0.88!187.99!ATF3;;chr8:72755987..72756002,-!p7@MSC!0.88!6.51!MSC;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.88!6.51!ZNF676;;chr7:19157248..19157268,-!p1@TWIST1!0.87!18.61!TWIST1;;chr6:10412392..10412409,-!p4@TFAP2A!0.86!7.13!TFAP2A;;chr18:45935720..45935772,-!p1@ZBTB7C!0.86!6.20!ZBTB7C;;chr5:174151553..174151610,+!p1@MSX2!0.85!10.55!MSX2;;chr8:49833948..49833973,-!p2@SNAI2!0.83!38.78!SNAI2;;chr3:169381420..169381535,-!p1@MECOM!0.83!6.82!MECOM;;chr12:66218255..66218304,+!p3@HMGA2!0.82!16.13!HMGA2;;chr3:5021191..5021202,+!p3@BHLHE40!0.82!15.82!BHLHE40;;chr21:38071430..38071456,+!p1@SIM2!0.82!5.58!SIM2;;chr4:4861385..4861398,+!p1@MSX1!0.81!17.37!MSX1;;chr1:158985493..158985535,+!p4@IFI16!0.81!8.69!IFI16;;chr13:41635029..41635044,-!p4@ELF1!0.80!11.79!ELF1;;chr13:100634031..100634045,+!p1@ZIC2!0.80!5.27!ZIC2;;chr17:46691732..46691766,-!p4@HOXB8!0.80!5.27!HOXB8;;chr17:46703528..46703549,-!p5@HOXB9!0.80!5.27!HOXB9;;chr2:238536207..238536290,+!p2@LRRFIP1!0.79!54.60!LRRFIP1;;chr8:72756267..72756296,-!p4@MSC!0.79!7.76!MSC;;chr5:131826457..131826514,-!p1@IRF1!0.78!217.14!IRF1;;chr12:66218598..66218645,+!p2@HMGA2!0.78!25.13!HMGA2;;chr19:52956798..52956843,+!p1@ZNF578!0.77!10.24!ZNF578;;chr8:72756667..72756736,-!p2@MSC!0.77!8.07!MSC;;chr14:35873947..35873965,-!p1@NFKBIA!0.75!326.03!NFKBIA;;chr17:46692318..46692362,-!p5@HOXB8!0.75!4.65!HOXB8;;chr1:212738742..212738755,+!p2@ATF3!0.75!4.65!ATF3;;chr1:8938709..8938720,-!p3@ENO1!0.74!240.41!ENO1;;chr17:46667594..46667619,-!p1@HOXB3!0.73!4.34!HOXB3;;chr17:46688310..46688323,-!p4@HOXB7!0.73!4.34!HOXB7;;chr13:100634130..100634143,+!p3@ZIC2!0.73!4.34!ZIC2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.73!4.34!LRRFIP1;;chr5:72744594..72744609,-!p1@FOXD1!0.72!21.40!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!0.72!4.96!HOXB2;;chr6:21597765..21597779,+!p2@SOX4!0.71!37.53!SOX4;;chr8:80679993..80680011,-!p1@HEY1!0.71!6.20!HEY1;;chr8:72756023..72756055,-!p6@MSC!0.71!5.27!MSC;;chr3:101568349..101568365,+!p1@NFKBIZ!0.70!238.24!NFKBIZ;;chr17:56065729..56065781,-!p2@VEZF1!0.70!19.54!VEZF1;;chr5:150284532..150284549,-!p1@ZNF300!0.70!9.00!ZNF300;;chr13:73636516..73636532,+!p3@KLF5!0.70!4.65!KLF5;;chr12:85674018..85674039,+!p3@ALX1!0.70!4.03!ALX1;;chr17:46692603..46692621,-!p6@HOXB8!0.70!4.03!HOXB8;;chr19:47523058..47523114,+!p1@NPAS1!0.70!4.03!NPAS1;;chr21:38071403..38071428,+!p2@SIM2!0.70!4.03!SIM2;;chr6:10415484..10415508,-!p3@TFAP2A!0.70!4.03!TFAP2A;;chr6:21593973..21593988,+!p1@SOX4!0.69!160.07!SOX4;;chr19:36391434..36391450,-!p1@NFKBID!0.69!8.38!NFKBID;;chr12:66218212..66218244,+!p5@HMGA2!0.69!5.89!HMGA2;;chr20:48807351..48807384,+!p1@CEBPB!0.68!452.59!CEBPB;;chr3:193853927..193853944,+!p1@HES1!0.68!142.69!HES1;;chr22:21771656..21771662,+!p1@HIC2!0.67!3.72!HIC2;;chr1:6479968..6479986,-!p1@HES2!0.67!3.72!HES2;;chr16:51185172..51185197,-!p1@SALL1!0.67!3.72!SALL1;;chr17:46675539..46675551,-!p7@HOXB6!0.67!3.72!HOXB6;;chr17:46703212..46703238,-!p2@HOXB9!0.67!3.72!HOXB9;;chr8:67874805..67874831,-!p1@TCF24!0.67!3.72!TCF24;;chr10:135122868..135122893,+!p3@ZNF511!0.67!3.72!ZNF511;;chr10:111985713..111985774,+!p2@MXI1!0.66!39.09!MXI1;;chr19:45504688..45504782,+!p1@RELB!0.66!25.13!RELB;;chr14:35872494..35872511,-!p5@NFKBIA!0.66!4.96!NFKBIA;;chr6:19837592..19837621,+!p1@ID4!0.65!24.82!ID4;;chr11:65430554..65430579,-!p3@RELA!0.65!9.93!RELA;;chr20:31350184..31350200,+!p1@DNMT3B!0.64!7.76!DNMT3B;;chr12:66218183..66218209,+!p4@HMGA2!0.64!7.13!HMGA2;;chr3:168865144..168865160,-!p6@MECOM!0.64!3.41!MECOM;;chr17:46675619..46675642,-!p5@HOXB6!0.64!3.41!HOXB6;;chr17:46806067..46806097,-!p1@HOXB13!0.64!3.41!HOXB13;;chr5:121465268..121465281,+!p2@ZNF474!0.64!3.41!ZNF474;;chr2:238600933..238600985,+!p3@LRRFIP1!0.63!20.47!LRRFIP1;;chr20:48807430..48807439,+!p8@CEBPB!0.63!5.27!CEBPB;;chr12:66218836..66218888,+!p1@HMGA2!0.62!35.36!HMGA2;;chr7:28448965..28448994,+!p2@CREB5!0.62!13.03!CREB5;;chr5:134369905..134369972,-!p1@PITX1!0.62!5.27!PITX1;;chr20:48807648..48807671,+!p9@CEBPB!0.62!4.96!CEBPB;;chr8:72756213..72756243,-!p5@MSC!0.62!4.34!MSC;;chr6:45296048..45296082,+!p1@RUNX2!0.62!3.72!RUNX2;;chr22:38598086..38598105,+!p1@MAFF!0.61!39.40!MAFF;;chr19:53193731..53193767,-!p1@ZNF83!0.61!32.88!ZNF83;;chr5:137804484..137804498,+!p2@EGR1!0.61!14.58!EGR1;;chr2:71127699..71127744,+!p1@VAX2!0.61!7.13!VAX2;;chr5:72744445..72744466,-!p2@FOXD1!0.61!5.58!FOXD1;;chr3:111314186..111314204,-!p1@ZBED2!0.61!3.10!ZBED2;;chr9:35732647..35732678,+!p2@CREB3!0.60!19.54!CREB3;;chr19:22235279..22235301,+!p1@ZNF257!0.60!6.20!ZNF257;;chr12:72056749..72056767,+!p6@THAP2!0.60!3.41!THAP2;;chr10:3827371..3827386,-!p2@KLF6!0.59!29.47!KLF6;;chr22:41777927..41777971,+!p1@TEF!0.59!29.16!TEF;;chr12:77459306..77459365,-!p1@E2F7!0.58!43.12!E2F7;;chr11:34645791..34645836,+!p3@EHF!0.58!2.79!EHF;;chr13:100634004..100634025,+!p2@ZIC2!0.58!2.79!ZIC2;;chr17:46675586..46675600,-!p6@HOXB6!0.58!2.79!HOXB6;;chr17:46687935..46687950,-!p3@HOXB7!0.58!2.79!HOXB7;;chr7:5111723..5111807,+!p2@RBAK!0.58!2.79!RBAK;;chr1:119530493..119530572,-!p1@TBX15!0.58!2.79!TBX15;;chr20:42602000..42602034,+!p5@TOX2!0.58!2.79!TOX2;;chr2:177053386..177053402,+!p1@HOXD1!0.58!2.79!HOXD1;;chr7:28725740..28725778,+!p1@CREB5!0.56!29.47!CREB5;;chr1:59249688..59249703,-!p3@JUN!0.56!19.54!JUN;;chr20:42543441..42543497,+!p1@TOX2!0.56!14.27!TOX2;;chr17:41623692..41623715,-!p1@ETV4!0.56!13.65!ETV4;;chr18:19749541..19749557,+!p1@GATA6!0.56!9.93!GATA6;;chr10:51572339..51572376,+!p4@NCOA4!0.56!6.82!NCOA4;;chr3:5021026..5021035,+!p5@BHLHE40!0.56!3.41!BHLHE40;;chr6:1312325..1312340,+!p1@FOXQ1!0.55!4.65!FOXQ1;;chr17:46622229..46622257,-!p6@HOXB2!0.55!3.10!HOXB2;;chr19:52598958..52599026,-!p1@ZNF841!0.54!29.78!ZNF841;;chr3:141087393..141087426,+!p3@ZBTB38!0.54!12.10!ZBTB38;;chr3:168865194..168865245,-!p3@MECOM!0.54!3.41!MECOM;;chr19:38183208..38183225,-!p1@ZNF781!0.54!3.41!ZNF781;;chr9:127533519..127533573,-!p2@NR6A1!0.54!3.10!NR6A1;;chr17:46675469..46675481,-!p4@HOXB6!0.54!2.48!HOXB6;;chr17:46703942..46703964,-!p4@HOXB9!0.54!2.48!HOXB9;;chr6:10412576..10412599,-!p5@TFAP2A!0.54!2.48!TFAP2A;;chr1:37945588..37945604,+!p3@ZC3H12A!0.54!2.48!ZC3H12A;;chr2:176994408..176994492,+!p1@HOXD8!0.54!2.48!HOXD8;;chr21:36259445..36259519,-!p4@RUNX1!0.53!8.07!RUNX1;;chr14:35872962..35873025,-!p3@NFKBIA!0.53!7.13!NFKBIA;;chr20:48807456..48807475,+!p3@CEBPB!0.53!5.27!CEBPB;;chr1:6684918..6684936,+!p2@THAP3!0.53!3.10!THAP3;;chr15:76629097..76629120,+!p2@ISL2!0.53!2.79!ISL2;;chr12:57914286..57914304,-!p1@DDIT3!0.51!106.71!DDIT3;;chr19:11925071..11925113,+!p1@ZNF440!0.51!20.78!ZNF440;;chr8:116681409..116681431,-!p2@TRPS1!0.51!7.44!TRPS1;;chr7:106809470..106809481,+!p2@HBP1!0.51!3.41!HBP1;;chr8:103667935..103667960,-!p1@KLF10!0.50!128.12!KLF10;;chr7:1570388..1570418,+!p2@MAFK!0.50!5.58!MAFK;;chr14:100705587..100705600,+!p5@YY1!0.50!4.65!YY1;;chr8:99956662..99956684,+!p1@OSR2!0.50!3.72!OSR2;;chr6:10415276..10415341,-!p2@TFAP2A!0.50!2.79!TFAP2A;;chr15:76629123..76629151,+!p1@ISL2!0.50!2.48!ISL2;;chr17:46621146..46621180,-!p10@HOXB2!0.50!2.17!HOXB2;;chr17:46675344..46675355,-!p9@HOXB6!0.50!2.17!HOXB6;;chr17:46703240..46703257,-!p6@HOXB9!0.50!2.17!HOXB9;;chr17:46703687..46703740,-!p1@HOXB9!0.50!2.17!HOXB9;;chr18:55102598..55102623,+!p1@ONECUT2!0.50!2.17!ONECUT2;;chr13:100623375..100623425,-!p1@ZIC5!0.50!2.17!ZIC5;;chr14:35874077..35874091,-!p8@NFKBIA!0.50!2.17!NFKBIA;;chr19:7584204..7584218,+!p9@ZNF358!0.50!2.17!ZNF358;;chr6:28321909..28321965,-!p3@ZNF323!0.50!2.17!ZNF323;;chr8:72756380..72756427,-!p8@MSC!0.50!2.17!MSC;;chr2:63277948..63277974,+!p1@OTX1!0.50!2.17!OTX1;;chr3:168865250..168865272,-!p5@MECOM!0.50!2.17!MECOM;;chr3:169381183..169381205,-!p4@MECOM!0.50!2.17!MECOM;;chr5:137801160..137801176,+!p1@EGR1!0.49!282.60!EGR1;;chr9:129567282..129567353,+!p1@ZBTB43!0.49!36.60!ZBTB43;;chr6:15246200..15246214,+!p2@JARID2!0.49!7.13!JARID2;;chr10:43932296..43932360,+!p1@ZNF487P!0.49!5.27!ZNF487P;;chr18:19749517..19749531,+!p3@GATA6!0.49!4.34!GATA6;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73780879..73780963,+!p1@UNK!0.18!22.65!UNK;;chr14:65569244..65569264,-!p2@MAX!0.18!14.89!MAX;;chr11:615942..615957,-!p1@IRF7!0.18!12.41!IRF7;;chr19:37064145..37064216,-!p1@ZNF529!0.18!10.86!ZNF529;;chr6:28193037..28193086,+!p1@ZNF193!0.18!10.24!ZNF193;;chr3:141868357..141868393,-!p3@TFDP2!0.18!8.38!TFDP2;;chr12:3068544..3068597,+!p1@TEAD4!0.18!7.44!TEAD4;;chr19:21106049..21106072,+!p1@ZNF85!0.18!6.82!ZNF85;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.18!5.89!ZNF20;;chr19:36909528..36909581,-!p1@ZFP82!0.18!5.58!ZFP82;;chr19:22034809..22034878,-!p2@ZNF43!0.18!4.03!ZNF43;;chr19:24097675..24097699,+!p1@ZNF726!0.18!3.72!ZNF726;;chr19:53636125..53636178,-!p1@ZNF415!0.18!3.10!ZNF415;;chr19:37958285..37958317,-!p3@ZNF569!0.18!2.79!ZNF569;;chr1:61548069..61548102,+!p3@NFIA!0.18!2.48!NFIA;;chr22:50247528..50247568,+!p2@ZBED4!0.18!2.48!ZBED4;;chr2:187350951..187350962,+!p2@ZC3H15!0.18!2.48!ZC3H15;;chr6:20403727..20403769,+!p4@E2F3!0.18!2.48!E2F3;;chr22:46546494..46546525,+!p2@PPARA!0.18!1.86!PPARA;;chr4:87857474..87857489,+!p7@AFF1!0.18!1.55!AFF1;;chr1:158969752..158969780,+!p6@IFI16!0.18!1.55!IFI16;;chr19:12444440..12444455,-!p1@ZNF563!0.18!1.55!ZNF563;;chr9:16870710..16870763,-!p1@BNC2!0.18!1.55!BNC2;;chr13:37494365..37494381,-!p1@SMAD9!0.18!1.55!SMAD9;;chr19:12444519..12444537,-!p3@ZNF563!0.18!1.24!ZNF563;;chr19:57019215..57019250,+!p1@ZNF471!0.18!1.24!ZNF471;;chr8:145980968..145980996,-!p2@ZNF251!0.18!1.24!ZNF251;;chr14:75746722..75746777,+!p2@FOS!0.18!0.93!FOS;;chr16:4366005..4366016,+!p@chr16:4366005..4366016,+!0.18!0.93!GLIS2;;chr18:3450334..3450341,+!p15@TGIF1!0.18!0.93!TGIF1;;chr19:13106383..13106423,+!p8@NFIX!0.18!0.93!NFIX;;chr19:18391615..18391637,-!p5@JUND!0.18!0.93!JUND;;chr19:52531585..52531596,-!p2@ZNF614!0.18!0.93!ZNF614;;chr1:211432872..211432883,+!p7@RCOR3!0.18!0.93!RCOR3;;chr3:12329320..12329338,+!p4@PPARG!0.18!0.62!PPARG;;chr17:41623667..41623682,-!p8@ETV4!0.18!0.62!ETV4;;chr6:34204642..34204664,+!p2@HMGA1!0.17!179.92!HMGA1;;chr13:27998720..27998826,+!p1@GTF3A!0.17!125.63!GTF3A;;chr19:1652575..1652621,-!p1@TCF3!0.17!51.18!TCF3;;chrX:47509928..47509990,-!p1@ELK1!0.17!40.95!ELK1;;chr17:38804061..38804112,-!p1@SMARCE1!0.17!35.05!SMARCE1;;chr19:39390587..39390646,+!p1@NFKBIB!0.17!20.78!NFKBIB;;chr19:57999101..57999158,+!p1@ZNF419!0.17!8.38!ZNF419;;chr19:53898380..53898422,+!p1@ZNF765!0.17!7.44!ZNF765;;chr13:41635512..41635539,-!p2@ELF1!0.17!6.82!ELF1;;chr2:85360499..85360598,+!p1@TCF7L1!0.17!6.82!TCF7L1;;chr19:53073532..53073551,+!p1@ZNF701!0.17!5.27!ZNF701;;chr6:20403916..20403965,+!p3@E2F3!0.17!5.27!E2F3;;chr13:74708504..74708549,-!p1@KLF12!0.17!5.27!KLF12;;chr19:1652555..1652568,-!p2@TCF3!0.17!4.65!TCF3;;chr19:37407212..37407280,+!p1@ZNF568!0.17!4.65!ZNF568;;chr19:18392250..18392260,-!p4@JUND!0.17!3.41!JUND;;chr6:12008986..12009016,+!p3@HIVEP1!0.17!3.41!HIVEP1;;chr16:1429627..1429662,-!p2@UNKL!0.17!3.10!UNKL;;chr17:41322281..41322328,-!p2@BRCA1!0.17!3.10!BRCA1;;chr18:45457478..45457517,-!p6@SMAD2!0.17!3.10!SMAD2;;chr19:37178482..37178520,+!p1@ZNF567!0.17!2.79!ZNF567;;chr16:67596384..67596411,+!p3@CTCF!0.17!2.48!CTCF;;chr18:51750928..51750942,-!p4@MBD2!0.17!2.48!MBD2;;chr19:58071166..58071189,-!p2@ZNF550!0.17!2.48!ZNF550;;chr4:146402843..146402864,+!p3@SMAD1!0.17!1.86!SMAD1;;chr1:16302608..16302621,-!p2@ZBTB17!0.17!1.55!ZBTB17;;chr1:6845489..6845494,+!p4@CAMTA1!0.17!1.55!CAMTA1;;chr8:123793988..123794016,+!p1@ZHX2!0.17!1.55!ZHX2;;chr14:103059006..103059017,+!p2@RCOR1!0.17!1.24!RCOR1;;chr5:178287112..178287133,+!p4@ZNF354B!0.17!0.93!ZNF354B;;chr9:110251836..110251887,-!p4@KLF4!0.17!0.93!KLF4;;chr16:30569801..30569845,-!p4@ZNF764!0.17!0.93!ZNF764;;
 
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.98!95.54!PAX8;;chr8:55370487..55370503,+!p1@SOX17!1.64!42.19!SOX17;;chr17:46675558..46675577,-!p2@HOXB6!1.56!35.67!HOXB6;;chr19:3574330..3574393,+!p2@HMG20B!1.34!21.09!HMG20B;;chr1:201979743..201979762,+!p1@ELF3!1.34!20.78!ELF3;;chr19:45971246..45971265,+!p1@FOSB!1.29!333.16!FOSB;;chr17:46682321..46682362,-!p1@HOXB6!1.29!18.30!HOXB6;;chr3:5021268..5021282,+!p4@BHLHE40!1.25!34.12!BHLHE40;;chr8:72756063..72756125,-!p1@MSC!1.24!32.88!MSC;;chr20:2673383..2673441,+!p1@EBF4!1.22!24.82!EBF4;;chr1:201979703..201979721,+!p2@ELF3!1.21!15.20!ELF3;;chr17:46692624..46692659,-!p3@HOXB8!1.16!13.34!HOXB8;;chr17:46687959..46688007,-!p2@HOXB7!1.14!17.68!HOXB7;;chr1:37940170..37940190,+!p1@ZC3H12A!1.13!154.48!ZC3H12A;;chr17:46688334..46688385,-!p1@HOXB7!1.11!17.06!HOXB7;;chr17:38256822..38256851,-!p1@NR1D1!1.06!83.45!NR1D1;;chr3:5021113..5021180,+!p1@BHLHE40!1.03!679.35!BHLHE40;;chr18:77155922..77155939,+!p1@NFATC1!1.02!26.37!NFATC1;;chr17:38256799..38256815,-!p3@NR1D1!1.02!17.37!NR1D1;;chr17:46692457..46692484,-!p2@HOXB8!1.01!9.31!HOXB8;;chr12:85673977..85674015,+!p1@ALX1!1.01!9.31!ALX1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.00!12.72!NFKBIZ;;chr20:50179368..50179392,-!p2@NFATC2!1.00!11.79!NFATC2;;chr17:46675420..46675465,-!p3@HOXB6!1.00!10.55!HOXB6;;chr19:48773337..48773339,+!p2@ZNF114!0.99!8.69!ZNF114;;chr17:46621937..46621966,-!p2@HOXB2!0.96!22.33!HOXB2;;chr10:64018918..64018936,+!p2@ZNF365!0.96!8.07!ZNF365;;chr13:73633131..73633149,+!p1@KLF5!0.95!88.10!KLF5;;chr17:35294075..35294102,+!p1@ENST00000559335!0.94!7.76!LHX1;;chr22:19748231..19748317,+!p1@TBX1!0.94!7.76!TBX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.93!12.72!TFAP2A;;chr14:75745523..75745537,+!p1@FOS!0.92!920.07!FOS;;chr11:61520075..61520136,+!p1@C11orf9!0.91!15.51!C11orf9;;chr17:46690839..46690884,-!p1@HOXB8!0.91!7.13!HOXB8;;chr7:63505799..63505904,+!p1@ZNF727!0.91!7.13!ZNF727;;chr14:35872453..35872485,-!p2@NFKBIA!0.90!17.68!NFKBIA;;chr6:1389789..1389821,+!p1@FOXF2!0.90!9.62!FOXF2;;chr8:49833978..49833996,-!p1@SNAI2!0.89!146.73!SNAI2;;chr1:212782094..212782109,+!p1@ATF3!0.88!187.99!ATF3;;chr8:72755987..72756002,-!p7@MSC!0.88!6.51!MSC;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.88!6.51!ZNF676;;chr7:19157248..19157268,-!p1@TWIST1!0.87!18.61!TWIST1;;chr6:10412392..10412409,-!p4@TFAP2A!0.86!7.13!TFAP2A;;chr18:45935720..45935772,-!p1@ZBTB7C!0.86!6.20!ZBTB7C;;chr5:174151553..174151610,+!p1@MSX2!0.85!10.55!MSX2;;chr8:49833948..49833973,-!p2@SNAI2!0.83!38.78!SNAI2;;chr3:169381420..169381535,-!p1@MECOM!0.83!6.82!MECOM;;chr12:66218255..66218304,+!p3@HMGA2!0.82!16.13!HMGA2;;chr3:5021191..5021202,+!p3@BHLHE40!0.82!15.82!BHLHE40;;chr21:38071430..38071456,+!p1@SIM2!0.82!5.58!SIM2;;chr4:4861385..4861398,+!p1@MSX1!0.81!17.37!MSX1;;chr1:158985493..158985535,+!p4@IFI16!0.81!8.69!IFI16;;chr13:41635029..41635044,-!p4@ELF1!0.80!11.79!ELF1;;chr13:100634031..100634045,+!p1@ZIC2!0.80!5.27!ZIC2;;chr17:46691732..46691766,-!p4@HOXB8!0.80!5.27!HOXB8;;chr17:46703528..46703549,-!p5@HOXB9!0.80!5.27!HOXB9;;chr2:238536207..238536290,+!p2@LRRFIP1!0.79!54.60!LRRFIP1;;chr8:72756267..72756296,-!p4@MSC!0.79!7.76!MSC;;chr5:131826457..131826514,-!p1@IRF1!0.78!217.14!IRF1;;chr12:66218598..66218645,+!p2@HMGA2!0.78!25.13!HMGA2;;chr19:52956798..52956843,+!p1@ZNF578!0.77!10.24!ZNF578;;chr8:72756667..72756736,-!p2@MSC!0.77!8.07!MSC;;chr14:35873947..35873965,-!p1@NFKBIA!0.75!326.03!NFKBIA;;chr17:46692318..46692362,-!p5@HOXB8!0.75!4.65!HOXB8;;chr1:212738742..212738755,+!p2@ATF3!0.75!4.65!ATF3;;chr1:8938709..8938720,-!p3@ENO1!0.74!240.41!ENO1;;chr17:46667594..46667619,-!p1@HOXB3!0.73!4.34!HOXB3;;chr17:46688310..46688323,-!p4@HOXB7!0.73!4.34!HOXB7;;chr13:100634130..100634143,+!p3@ZIC2!0.73!4.34!ZIC2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.73!4.34!LRRFIP1;;chr5:72744594..72744609,-!p1@FOXD1!0.72!21.40!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!0.72!4.96!HOXB2;;chr6:21597765..21597779,+!p2@SOX4!0.71!37.53!SOX4;;chr8:80679993..80680011,-!p1@HEY1!0.71!6.20!HEY1;;chr8:72756023..72756055,-!p6@MSC!0.71!5.27!MSC;;chr3:101568349..101568365,+!p1@NFKBIZ!0.70!238.24!NFKBIZ;;chr17:56065729..56065781,-!p2@VEZF1!0.70!19.54!VEZF1;;chr5:150284532..150284549,-!p1@ZNF300!0.70!9.00!ZNF300;;chr13:73636516..73636532,+!p3@KLF5!0.70!4.65!KLF5;;chr12:85674018..85674039,+!p3@ALX1!0.70!4.03!ALX1;;chr17:46692603..46692621,-!p6@HOXB8!0.70!4.03!HOXB8;;chr19:47523058..47523114,+!p1@NPAS1!0.70!4.03!NPAS1;;chr21:38071403..38071428,+!p2@SIM2!0.70!4.03!SIM2;;chr6:10415484..10415508,-!p3@TFAP2A!0.70!4.03!TFAP2A;;chr6:21593973..21593988,+!p1@SOX4!0.69!160.07!SOX4;;chr19:36391434..36391450,-!p1@NFKBID!0.69!8.38!NFKBID;;chr12:66218212..66218244,+!p5@HMGA2!0.69!5.89!HMGA2;;chr20:48807351..48807384,+!p1@CEBPB!0.68!452.59!CEBPB;;chr3:193853927..193853944,+!p1@HES1!0.68!142.69!HES1;;chr22:21771656..21771662,+!p1@HIC2!0.67!3.72!HIC2;;chr1:6479968..6479986,-!p1@HES2!0.67!3.72!HES2;;chr16:51185172..51185197,-!p1@SALL1!0.67!3.72!SALL1;;chr17:46675539..46675551,-!p7@HOXB6!0.67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;chr1:44513995..44514031,+!p1@KLF17!0.21!0.62!KLF17;;chr20:48808064..48808086,+!p15@CEBPB!0.21!0.62!CEBPB;;chr20:48808740..48808743,+!p25@CEBPB!0.21!0.62!CEBPB;;chr20:50179334..50179343,-!p3@NFATC2!0.21!0.62!NFATC2;;chr20:50808639..50808661,-!p6@ZFP64!0.21!0.62!ZFP64;;chr20:590944..590960,-!p1@TCF15!0.21!0.62!TCF15;;chr16:51185511..51185522,-!p9@SALL1!0.21!0.62!SALL1;;chr16:51185573..51185593,-!p3@SALL1!0.21!0.62!SALL1;;chr16:54320127..54320148,-!p6@IRX3!0.21!0.62!IRX3;;chr16:73082542..73082574,-!p11@ZFHX3!0.21!0.62!ZFHX3;;chr17:36105074..36105086,-!p2@HNF1B!0.21!0.62!HNF1B;;chr17:36871943..36871947,+!p8@MLLT6!0.21!0.62!MLLT6;;chr17:40428334..40428345,-!p2@STAT5B!0.21!0.62!STAT5B;;chr17:40540591..40540600,-!p3@STAT3!0.21!0.62!STAT3;;chr17:45928443..45928473,-!p2@SP6!0.21!0.62!SP6;;chr17:46622143..46622152,-!p14@HOXB2!0.21!0.62!HOXB2;;chr17:46655578..46655589,-!p4@HOXB4!0.21!0.62!HOXB4;;chr17:46670037..46670060,-!p3@HOXB5!0.21!0.62!HOXB5;;chr17:46703436..46703460,-!p7@HOXB9!0.21!0.62!HOXB9;;chr17:7382810..7382822,-!p12@ZBTB4!0.21!0.62!ZBTB4;;chr18:45663534..45663544,-!p7@ZBTB7C!0.21!0.62!ZBTB7C;;chr18:74207227..74207238,-!p5@ZNF516!0.21!0.62!ZNF516;;chr19:18391785..18391792,-!p9@JUND!0.21!0.62!JUND;;chr19:1863887..1863918,-!p6@KLF16!0.21!0.62!KLF16;;chr19:19729458..19729469,-!p2@PBX4!0.21!0.62!PBX4;;chr19:20959142..20959151,+!p2@ZNF66P!0.21!0.62!ZNF66P;;chr19:22034784..22034801,-!p4@ZNF43!0.21!0.62!ZNF43;;chr19:3572758..3572795,+!p7@HMG20B!0.21!0.62!HMG20B;;chr19:36705763..36705777,-!p4@ZNF565!0.21!0.62!ZNF565;;chr19:36909811..36909826,-!p3@ZFP82!0.21!0.62!ZFP82;;chr14:69259772..69259790,-!p1@ZFP36L1!0.20!147.97!ZFP36L1;;chr1:59249707..59249727,-!p1@JUN!0.20!60.80!JUN;;chr19:19303731..19303783,+!p1@RFXANK!0.20!33.19!RFXANK;;chr6:41040678..41040722,+!p1@NFYA!0.20!28.85!NFYA;;chr19:20844368..20844407,-!p1@ZNF626!0.20!19.54!ZNF626;;chr19:17356697..17356762,-!p1@NR2F6!0.20!19.23!NR2F6;;chr13:41240737..41240787,-!p1@FOXO1!0.20!16.44!FOXO1;;chr19:14117085..14117141,-!p1@RFX1!0.20!13.65!RFX1;;chr1:246729544..246729572,-!p1@TFB2M!0.20!13.34!TFB2M;;chr19:9649268..9649298,-!p1@ZNF426!0.20!9.00!ZNF426;;chr19:56826201..56826247,-!p1@ZSCAN5A!0.20!8.69!ZSCAN5A;;chr19:49140609..49140643,-!p1@DBP!0.20!7.44!DBP;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.20!7.44!ZNF10;;chr1:33005020..33005077,+!p1@ZBTB8A!0.20!7.13!ZBTB8A;;chr19:35264089..35264146,-!p1@ZNF599!0.20!6.51!ZNF599;;chr19:45251805..45251840,+!p4@BCL3!0.20!3.72!BCL3;;chr1:249132556..249132573,+!p3@ZNF672!0.20!3.41!ZNF672;;chr12:96588368..96588394,+!p3@ELK3!0.20!3.10!ELK3;;chr19:56152332..56152347,+!p4@ZNF580!0.20!2.48!ZNF580;;chr5:178157700..178157734,-!p3@ZNF354A!0.20!2.17!ZNF354A;;chr2:70314240..70314256,+!p4@PCBP1!0.20!2.17!PCBP1;;chr2:74375081..74375092,-!p2@BOLA3!0.20!2.17!BOLA3;;chr12:133706820..133706881,-!p1@ZNF891!0.20!2.17!ZNF891;;chr18:47814010..47814021,-!p3@CXXC1!0.20!1.55!CXXC1;;chr20:48807779..48807802,+!p10@CEBPB!0.20!1.55!CEBPB;;chr20:6748325..6748352,+!p1@BMP2!0.20!1.24!BMP2;;chr19:12175504..12175519,+!p2@ZNF844!0.20!1.24!ZNF844;;chr5:178322893..178322931,+!p1@ZFP2!0.20!1.24!ZFP2;;chr6:108882076..108882087,+!p6@FOXO3!0.20!0.93!FOXO3;;chr17:40719165..40719168,+!p4@MLX!0.20!0.93!MLX;;chr19:9785710..9785721,-!p3@ZNF562!0.20!0.93!ZNF562;;chr8:102217817..102217936,-!p1@ZNF706!0.19!65.45!ZNF706;;chr19:44123734..44123796,-!p1@ZNF428!0.19!51.80!ZNF428;;chrX:128657457..128657475,-!p1@SMARCA1!0.19!15.51!SMARCA1;;chr16:75182376..75182458,+!p1@ZFP1!0.19!14.27!ZFP1;;chr19:57702846..57702891,+!p1@ZNF264!0.19!13.65!ZNF264;;chr2:208030647..208030689,-!p1@KLF7!0.19!11.17!KLF7;;chr7:64023441..64023462,-!p1@ZNF680!0.19!10.55!ZNF680;;chr11:129765427..129765492,-!p1@NFRKB!0.19!10.55!NFRKB;;chr19:58740266..58740297,+!p1@ZNF544!0.19!9.31!ZNF544;;chr1:151431647..151431669,-!p2@POGZ!0.19!6.20!POGZ;;chr12:104531854..104531893,-!p2@NFYB!0.19!4.34!NFYB;;chr6:12011943..12012015,+!p2@HIVEP1!0.19!3.72!HIVEP1;;chr19:44860820..44860843,-!p1@ZFP112,p1@ZNF285!0.19!3.10!ZFP112;;chr1:44679159..44679189,+!p2@DMAP1!0.19!3.10!DMAP1;;chr19:44331555..44331581,+!p2@ZNF283!0.19!2.17!ZNF283;;chr6:41514005..41514026,+!p3@FOXP4!0.19!2.17!FOXP4;;chr16:31724618..31724630,+!p2@ZNF720!0.19!1.86!ZNF720;;chr17:79885537..79885554,-!p2@MAFG!0.19!1.86!MAFG;;chr19:24097706..24097731,+!p2@ZNF726!0.19!1.86!ZNF726;;chr19:3572908..3572917,+!p3@HMG20B!0.19!1.55!HMG20B;;chr10:43932553..43932571,+!p2@ZNF487P!0.19!1.55!ZNF487P;;chr11:67007522..67007533,+!p5@KDM2A!0.19!1.55!KDM2A;;chr11:67007535..67007546,+!p7@KDM2A!0.19!1.24!KDM2A;;chr17:41622925..41622976,-!p3@ETV4!0.19!1.24!ETV4;;chrX:84499081..84499115,+!p2@ZNF711!0.19!1.24!ZNF711;;chr14:89029323..89029329,+!p4@ZC3H14!0.19!0.93!ZC3H14;;chr2:61108808..61108821,+!p3@REL!0.19!0.93!REL;;chr3:39195139..39195150,-!p3@CSRNP1!0.19!0.93!CSRNP1;;chr6:21597431..21597447,+!p8@SOX4!0.19!0.93!SOX4;;chr7:127032330..127032356,-!p3@ZNF800!0.19!0.93!ZNF800;;chr8:81397846..81397860,+!p3@ZBTB10!0.19!0.93!ZBTB10;;chr19:50879705..50879775,+!p1@NR1H2!0.18!63.59!NR1H2;;chr17:73780879..73780963,+!p1@UNK!0.18!22.65!UNK;;chr14:65569244..65569264,-!p2@MAX!0.18!14.89!MAX;;chr11:615942..615957,-!p1@IRF7!0.18!12.41!IRF7;;chr19:37064145..37064216,-!p1@ZNF529!0.18!10.86!ZNF529;;chr6:28193037..28193086,+!p1@ZNF193!0.18!10.24!ZNF193;;chr3:141868357..141868393,-!p3@TFDP2!0.18!8.38!TFDP2;;chr12:3068544..3068597,+!p1@TEAD4!0.18!7.44!TEAD4;;chr19:21106049..21106072,+!p1@ZNF85!0.18!6.82!ZNF85;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.18!5.89!ZNF20;;chr19:36909528..36909581,-!p1@ZFP82!0.18!5.58!ZFP82;;chr19:22034809..22034878,-!p2@ZNF43!0.18!4.03!ZNF43;;chr19:24097675..24097699,+!p1@ZNF726!0.18!3.72!ZNF726;;chr19:53636125..53636178,-!p1@ZNF415!0.18!3.10!ZNF415;;chr19:37958285..37958317,-!p3@ZNF569!0.18!2.79!ZNF569;;chr1:61548069..61548102,+!p3@NFIA!0.18!2.48!NFIA;;chr22:50247528..50247568,+!p2@ZBED4!0.18!2.48!ZBED4;;chr2:187350951..187350962,+!p2@ZC3H15!0.18!2.48!ZC3H15;;chr6:20403727..20403769,+!p4@E2F3!0.18!2.48!E2F3;;chr22:46546494..46546525,+!p2@PPARA!0.18!1.86!PPARA;;chr4:87857474..87857489,+!p7@AFF1!0.18!1.55!AFF1;;chr1:158969752..158969780,+!p6@IFI16!0.18!1.55!IFI16;;chr19:12444440..12444455,-!p1@ZNF563!0.18!1.55!ZNF563;;chr9:16870710..16870763,-!p1@BNC2!0.18!1.55!BNC2;;chr13:37494365..37494381,-!p1@SMAD9!0.18!1.55!SMAD9;;chr19:12444519..12444537,-!p3@ZNF563!0.18!1.24!ZNF563;;chr19:57019215..57019250,+!p1@ZNF471!0.18!1.24!ZNF471;;chr8:145980968..145980996,-!p2@ZNF251!0.18!1.24!ZNF251;;chr14:75746722..75746777,+!p2@FOS!0.18!0.93!FOS;;chr16:4366005..4366016,+!p@chr16:4366005..4366016,+!0.18!0.93!GLIS2;;chr18:3450334..3450341,+!p15@TGIF1!0.18!0.93!TGIF1;;chr19:13106383..13106423,+!p8@NFIX!0.18!0.93!NFIX;;chr19:18391615..18391637,-!p5@JUND!0.18!0.93!JUND;;chr19:52531585..52531596,-!p2@ZNF614!0.18!0.93!ZNF614;;chr1:211432872..211432883,+!p7@RCOR3!0.18!0.93!RCOR3;;chr3:12329320..12329338,+!p4@PPARG!0.18!0.62!PPARG;;chr17:41623667..41623682,-!p8@ETV4!0.18!0.62!ETV4;;chr6:34204642..34204664,+!p2@HMGA1!0.17!179.92!HMGA1;;chr13:27998720..27998826,+!p1@GTF3A!0.17!125.63!GTF3A;;chr19:1652575..1652621,-!p1@TCF3!0.17!51.18!TCF3;;chrX:47509928..47509990,-!p1@ELK1!0.17!40.95!ELK1;;chr17:38804061..38804112,-!p1@SMARCE1!0.17!35.05!SMARCE1;;chr19:39390587..39390646,+!p1@NFKBIB!0.17!20.78!NFKBIB;;chr19:57999101..57999158,+!p1@ZNF419!0.17!8.38!ZNF419;;chr19:53898380..53898422,+!p1@ZNF765!0.17!7.44!ZNF765;;chr13:41635512..41635539,-!p2@ELF1!0.17!6.82!ELF1;;chr2:85360499..85360598,+!p1@TCF7L1!0.17!6.82!TCF7L1;;chr19:53073532..53073551,+!p1@ZNF701!0.17!5.27!ZNF701;;chr6:20403916..20403965,+!p3@E2F3!0.17!5.27!E2F3;;chr13:74708504..74708549,-!p1@KLF12!0.17!5.27!KLF12;;chr19:1652555..1652568,-!p2@TCF3!0.17!4.65!TCF3;;chr19:37407212..37407280,+!p1@ZNF568!0.17!4.65!ZNF568;;chr19:18392250..18392260,-!p4@JUND!0.17!3.41!JUND;;chr6:12008986..12009016,+!p3@HIVEP1!0.17!3.41!HIVEP1;;chr16:1429627..1429662,-!p2@UNKL!0.17!3.10!UNKL;;chr17:41322281..41322328,-!p2@BRCA1!0.17!3.10!BRCA1;;chr18:45457478..45457517,-!p6@SMAD2!0.17!3.10!SMAD2;;chr19:37178482..37178520,+!p1@ZNF567!0.17!2.79!ZNF567;;chr16:67596384..67596411,+!p3@CTCF!0.17!2.48!CTCF;;chr18:51750928..51750942,-!p4@MBD2!0.17!2.48!MBD2;;chr19:58071166..58071189,-!p2@ZNF550!0.17!2.48!ZNF550;;chr4:146402843..146402864,+!p3@SMAD1!0.17!1.86!SMAD1;;chr1:16302608..16302621,-!p2@ZBTB17!0.17!1.55!ZBTB17;;chr1:6845489..6845494,+!p4@CAMTA1!0.17!1.55!CAMTA1;;chr8:123793988..123794016,+!p1@ZHX2!0.17!1.55!ZHX2;;chr14:103059006..103059017,+!p2@RCOR1!0.17!1.24!RCOR1;;chr5:178287112..178287133,+!p4@ZNF354B!0.17!0.93!ZNF354B;;chr9:110251836..110251887,-!p4@KLF4!0.17!0.93!KLF4;;chr16:30569801..30569845,-!p4@ZNF764!0.17!0.93!ZNF764;;
Line 39: Line 41:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520adenocarcinoma%2520cell%2520line%253aSK-OV-3-R%2520after%2520co-culture%2520with%2520SOC-57-02-G%252c%2520biol_rep1.CNhs13508.11843-124H7.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520adenocarcinoma%2520cell%2520line%253aSK-OV-3-R%2520after%2520co-culture%2520with%2520SOC-57-02-G%252c%2520biol_rep1.CNhs13508.11843-124H7.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/serous%2520adenocarcinoma%2520cell%2520line%253aSK-OV-3-R%2520after%2520co-culture%2520with%2520SOC-57-02-G%252c%2520biol_rep1.CNhs13508.11843-124H7.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/serous%2520adenocarcinoma%2520cell%2520line%253aSK-OV-3-R%2520after%2520co-culture%2520with%2520SOC-57-02-G%252c%2520biol_rep1.CNhs13508.11843-124H7.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/serous%2520adenocarcinoma%2520cell%2520line%253aSK-OV-3-R%2520after%2520co-culture%2520with%2520SOC-57-02-G%252c%2520biol_rep1.CNhs13508.11843-124H7.hg38.nobarcode.ctss.bed.gz
 
|id=FF:11843-124H7
 
|id=FF:11843-124H7
 
|is_a=EFO:0001746;;EFO:0002091;;FF:0000210;;FF:0000350;;FF:0103803
 
|is_a=EFO:0001746;;EFO:0002091;;FF:0000210;;FF:0000350;;FF:0103803
 
|is_obsolete=
 
|is_obsolete=
|library_ids=CNhs13508
+
|library_id=CNhs13508
 +
|library_id_phase_based=2:CNhs13508
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11843
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11843
 
|name=serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, biol_rep1
 
|name=serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, biol_rep1
 
|namespace=
 
|namespace=
Line 48: Line 60:
 
|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs13508,LSID1025,release012,COMPLETED
 
|profile_hcage=CNhs13508,LSID1025,release012,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 
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Line 87: Line 100:
 
|top_motifs=ALX1:1.18541040599;ONECUT1,2:1.16454582963;HIF1A:1.09156216267;RXRA_VDR{dimer}:1.04862264837;NKX3-1:0.895498827804;FOXQ1:0.864104485913;XCPE1{core}:0.765498292955;PPARG:0.759260870415;PAX8:0.752929307455;HOXA9_MEIS1:0.751388583089;LHX3,4:0.728170423307;POU3F1..4:0.713078404913;BACH2:0.669317249003;ZBTB16:0.628453780359;SP1:0.503017819893;STAT5{A,B}:0.495639283673;NFE2L2:0.489358838305;FOSL2:0.471612647654;UFEwm:0.470638322268;PAX4:0.414551761945;ATF6:0.410703614049;FOS_FOS{B,L1}_JUN{B,D}:0.398720416972;ZNF148:0.379571569828;RFX1:0.376921036742;TBP:0.349250278154;PBX1:0.342908245363;NR6A1:0.339633249353;NFKB1_REL_RELA:0.334542027543;POU1F1:0.308616745625;HNF1A:0.306261326696;NFE2:0.298566093218;ZNF423:0.285866434892;SMAD1..7,9:0.261456374849;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.238898166431;HOX{A5,B5}:0.169276519159;HLF:0.16709840538;ATF4:0.148591896776;EGR1..3:0.146973831227;HMX1:0.145406342498;TFAP2B:0.135431508861;NR3C1:0.130785481433;NR1H4:0.127070061072;CDC5L:0.122984560097;NFE2L1:0.110784806616;MYOD1:0.10816803026;HES1:0.0893968505854;GLI1..3:0.0839225323902;bHLH_family:0.0735175993642;STAT2,4,6:0.0706453329669;ALX4:0.069724678216;STAT1,3:0.0669763564335;TEAD1:0.0503426564235;ARID5B:0.0502196399355;PRRX1,2:0.0488597885794;EBF1:0.0414603309653;POU6F1:0.0265653864598;TFDP1:0.0246299327168;PAX2:0.0200832940543;NANOG:-3.09802577455e-05;ZBTB6:-0.00147446769269;TLX1..3_NFIC{dimer}:-0.00306260768152;ZFP161:-0.00694591392201;ATF5_CREB3:-0.0115453635131;CEBPA,B_DDIT3:-0.0212266441973;TBX4,5:-0.0612625048887;HIC1:-0.0628574915268;ZNF143:-0.0684661477392;LEF1_TCF7_TCF7L1,2:-0.0771511198408;EVI1:-0.084843909715;MYFfamily:-0.0893153166607;FOXN1:-0.0918603234384;ATF2:-0.093894025537;BPTF:-0.120148943042;PDX1:-0.128053675444;NHLH1,2:-0.133813246618;IKZF1:-0.133852029113;TEF:-0.137440403729;GTF2A1,2:-0.140890389743;TP53:-0.150260901987;GFI1:-0.162691883011;NRF1:-0.16529510894;POU2F1..3:-0.165622390559;PAX1,9:-0.181025232042;GFI1B:-0.192724499821;SOX2:-0.197573853102;GZF1:-0.199856886161;ESRRA:-0.200548244549;TFAP4:-0.20274143221;ZEB1:-0.203694238844;SPZ1:-0.204303937207;RORA:-0.205420906677;TAL1_TCF{3,4,12}:-0.207816856638;IRF7:-0.208948445331;FOX{F1,F2,J1}:-0.212119127129;OCT4_SOX2{dimer}:-0.215352211047;PAX6:-0.218810334197;AHR_ARNT_ARNT2:-0.220677137519;SNAI1..3:-0.223411417168;ZNF238:-0.224552750287;FOXL1:-0.228802549195;HSF1,2:-0.237209055947;REST:-0.238449944122;ELK1,4_GABP{A,B1}:-0.244433350942;MEF2{A,B,C,D}:-0.246854329702;NFIX:-0.248745718963;EN1,2:-0.253878854707;RXR{A,B,G}:-0.257189194077;AIRE:-0.257954177073;IKZF2:-0.260209237786;NFIL3:-0.265112738548;NANOG{mouse}:-0.269078135542;GATA6:-0.26929254197;VSX1,2:-0.27009374118;CUX2:-0.29875118853;SOX17:-0.301099577507;HNF4A_NR2F1,2:-0.304587230681;EP300:-0.315510420778;PITX1..3:-0.325697609011;MAFB:-0.336359582073;ADNP_IRX_SIX_ZHX:-0.345532008995;XBP1:-0.34676682898;FOXP3:-0.347107411099;NKX3-2:-0.35544424705;ZIC1..3:-0.366258090534;DBP:-0.37218326891;AR:-0.374616949419;MED-1{core}:-0.376294138538;RREB1:-0.398358035979;BREu{core}:-0.398726594829;HOX{A4,D4}:-0.400453682614;GTF2I:-0.402367317395;TFCP2:-0.407664842629;NKX2-1,4:-0.427493338496;HOX{A6,A7,B6,B7}:-0.428504563254;NFY{A,B,C}:-0.437225936005;DMAP1_NCOR{1,2}_SMARC:-0.439039844179;NR5A1,2:-0.448546584354;SREBF1,2:-0.448609343122;FOX{D1,D2}:-0.453837256789;FOXD3:-0.454653389107;PAX3,7:-0.455765642153;RFX2..5_RFXANK_RFXAP:-0.459967148562;MYB:-0.461043878033;MTE{core}:-0.46343424047;RUNX1..3:-0.467557013184;IRF1,2:-0.469790061329;CREB1:-0.470950397822;TFAP2{A,C}:-0.491788548029;MTF1:-0.497492393501;SPIB:-0.501007979366;SRF:-0.51323937039;SOX{8,9,10}:-0.519772582436;CRX:-0.519773100077;YY1:-0.539349194304;E2F1..5:-0.539609960626;NFATC1..3:-0.556362674505;HBP1_HMGB_SSRP1_UBTF:-0.56085315675;T:-0.565714177277;POU5F1:-0.582682577389;JUN:-0.589886162779;FOXA2:-0.611268645878;RBPJ:-0.635711000588;ESR1:-0.653554727547;ETS1,2:-0.65736936129;FOX{I1,J2}:-0.670971861893;LMO2:-0.673235547485;CDX1,2,4:-0.681347872245;SPI1:-0.683085871034;FOXM1:-0.722204244417;NKX6-1,2:-0.725106681799;NKX2-3_NKX2-5:-0.731621068986;NKX2-2,8:-0.732698320231;HMGA1,2:-0.763310208271;HAND1,2:-0.766017081262;ZNF384:-0.767180968004;TLX2:-0.770549584151;MAZ:-0.789750404023;SOX5:-0.816376174292;MYBL2:-0.853078267193;TOPORS:-0.854311775686;GCM1,2:-0.866680061312;PATZ1:-0.876516362044;MZF1:-0.900038281465;KLF4:-0.997237208506;PAX5:-1.00895331859;FOXP1:-1.02756746085;ELF1,2,4:-1.0614225473;PRDM1:-1.09375250529;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.11534033464;GATA4:-1.25920186219;FOXO1,3,4:-1.3161427503;TGIF1:-1.33939535301
 
|top_motifs=ALX1:1.18541040599;ONECUT1,2:1.16454582963;HIF1A:1.09156216267;RXRA_VDR{dimer}:1.04862264837;NKX3-1:0.895498827804;FOXQ1:0.864104485913;XCPE1{core}:0.765498292955;PPARG:0.759260870415;PAX8:0.752929307455;HOXA9_MEIS1:0.751388583089;LHX3,4:0.728170423307;POU3F1..4:0.713078404913;BACH2:0.669317249003;ZBTB16:0.628453780359;SP1:0.503017819893;STAT5{A,B}:0.495639283673;NFE2L2:0.489358838305;FOSL2:0.471612647654;UFEwm:0.470638322268;PAX4:0.414551761945;ATF6:0.410703614049;FOS_FOS{B,L1}_JUN{B,D}:0.398720416972;ZNF148:0.379571569828;RFX1:0.376921036742;TBP:0.349250278154;PBX1:0.342908245363;NR6A1:0.339633249353;NFKB1_REL_RELA:0.334542027543;POU1F1:0.308616745625;HNF1A:0.306261326696;NFE2:0.298566093218;ZNF423:0.285866434892;SMAD1..7,9:0.261456374849;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.238898166431;HOX{A5,B5}:0.169276519159;HLF:0.16709840538;ATF4:0.148591896776;EGR1..3:0.146973831227;HMX1:0.145406342498;TFAP2B:0.135431508861;NR3C1:0.130785481433;NR1H4:0.127070061072;CDC5L:0.122984560097;NFE2L1:0.110784806616;MYOD1:0.10816803026;HES1:0.0893968505854;GLI1..3:0.0839225323902;bHLH_family:0.0735175993642;STAT2,4,6:0.0706453329669;ALX4:0.069724678216;STAT1,3:0.0669763564335;TEAD1:0.0503426564235;ARID5B:0.0502196399355;PRRX1,2:0.0488597885794;EBF1:0.0414603309653;POU6F1:0.0265653864598;TFDP1:0.0246299327168;PAX2:0.0200832940543;NANOG:-3.09802577455e-05;ZBTB6:-0.00147446769269;TLX1..3_NFIC{dimer}:-0.00306260768152;ZFP161:-0.00694591392201;ATF5_CREB3:-0.0115453635131;CEBPA,B_DDIT3:-0.0212266441973;TBX4,5:-0.0612625048887;HIC1:-0.0628574915268;ZNF143:-0.0684661477392;LEF1_TCF7_TCF7L1,2:-0.0771511198408;EVI1:-0.084843909715;MYFfamily:-0.0893153166607;FOXN1:-0.0918603234384;ATF2:-0.093894025537;BPTF:-0.120148943042;PDX1:-0.128053675444;NHLH1,2:-0.133813246618;IKZF1:-0.133852029113;TEF:-0.137440403729;GTF2A1,2:-0.140890389743;TP53:-0.150260901987;GFI1:-0.162691883011;NRF1:-0.16529510894;POU2F1..3:-0.165622390559;PAX1,9:-0.181025232042;GFI1B:-0.192724499821;SOX2:-0.197573853102;GZF1:-0.199856886161;ESRRA:-0.200548244549;TFAP4:-0.20274143221;ZEB1:-0.203694238844;SPZ1:-0.204303937207;RORA:-0.205420906677;TAL1_TCF{3,4,12}:-0.207816856638;IRF7:-0.208948445331;FOX{F1,F2,J1}:-0.212119127129;OCT4_SOX2{dimer}:-0.215352211047;PAX6:-0.218810334197;AHR_ARNT_ARNT2:-0.220677137519;SNAI1..3:-0.223411417168;ZNF238:-0.224552750287;FOXL1:-0.228802549195;HSF1,2:-0.237209055947;REST:-0.238449944122;ELK1,4_GABP{A,B1}:-0.244433350942;MEF2{A,B,C,D}:-0.246854329702;NFIX:-0.248745718963;EN1,2:-0.253878854707;RXR{A,B,G}:-0.257189194077;AIRE:-0.257954177073;IKZF2:-0.260209237786;NFIL3:-0.265112738548;NANOG{mouse}:-0.269078135542;GATA6:-0.26929254197;VSX1,2:-0.27009374118;CUX2:-0.29875118853;SOX17:-0.301099577507;HNF4A_NR2F1,2:-0.304587230681;EP300:-0.315510420778;PITX1..3:-0.325697609011;MAFB:-0.336359582073;ADNP_IRX_SIX_ZHX:-0.345532008995;XBP1:-0.34676682898;FOXP3:-0.347107411099;NKX3-2:-0.35544424705;ZIC1..3:-0.366258090534;DBP:-0.37218326891;AR:-0.374616949419;MED-1{core}:-0.376294138538;RREB1:-0.398358035979;BREu{core}:-0.398726594829;HOX{A4,D4}:-0.400453682614;GTF2I:-0.402367317395;TFCP2:-0.407664842629;NKX2-1,4:-0.427493338496;HOX{A6,A7,B6,B7}:-0.428504563254;NFY{A,B,C}:-0.437225936005;DMAP1_NCOR{1,2}_SMARC:-0.439039844179;NR5A1,2:-0.448546584354;SREBF1,2:-0.448609343122;FOX{D1,D2}:-0.453837256789;FOXD3:-0.454653389107;PAX3,7:-0.455765642153;RFX2..5_RFXANK_RFXAP:-0.459967148562;MYB:-0.461043878033;MTE{core}:-0.46343424047;RUNX1..3:-0.467557013184;IRF1,2:-0.469790061329;CREB1:-0.470950397822;TFAP2{A,C}:-0.491788548029;MTF1:-0.497492393501;SPIB:-0.501007979366;SRF:-0.51323937039;SOX{8,9,10}:-0.519772582436;CRX:-0.519773100077;YY1:-0.539349194304;E2F1..5:-0.539609960626;NFATC1..3:-0.556362674505;HBP1_HMGB_SSRP1_UBTF:-0.56085315675;T:-0.565714177277;POU5F1:-0.582682577389;JUN:-0.589886162779;FOXA2:-0.611268645878;RBPJ:-0.635711000588;ESR1:-0.653554727547;ETS1,2:-0.65736936129;FOX{I1,J2}:-0.670971861893;LMO2:-0.673235547485;CDX1,2,4:-0.681347872245;SPI1:-0.683085871034;FOXM1:-0.722204244417;NKX6-1,2:-0.725106681799;NKX2-3_NKX2-5:-0.731621068986;NKX2-2,8:-0.732698320231;HMGA1,2:-0.763310208271;HAND1,2:-0.766017081262;ZNF384:-0.767180968004;TLX2:-0.770549584151;MAZ:-0.789750404023;SOX5:-0.816376174292;MYBL2:-0.853078267193;TOPORS:-0.854311775686;GCM1,2:-0.866680061312;PATZ1:-0.876516362044;MZF1:-0.900038281465;KLF4:-0.997237208506;PAX5:-1.00895331859;FOXP1:-1.02756746085;ELF1,2,4:-1.0614225473;PRDM1:-1.09375250529;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.11534033464;GATA4:-1.25920186219;FOXO1,3,4:-1.3161427503;TGIF1:-1.33939535301
 
|xref=
 
|xref=
}} {{DRAAccessionNumbers
+
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11843-124H7;search_select_hide=table117:FF:11843-124H7
|DRA_sample_Accession=CAGE@DRS007892
 
|accession_numbers=DRX007999;DRR008871;DRZ000296;DRZ001681;CAGE
 
|library_id=CNhs13508
 
 
}}
 
}}

Latest revision as of 09:23, 4 June 2020

Name:serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, biol_rep1
Species:Human (Homo sapiens)
Library ID:CNhs13508
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005193
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13508 CAGE DRX007999 DRR008871
Accession ID Hg19

Library idBAMCTSS
CNhs13508 DRZ000296 DRZ001681
Accession ID Hg38

Library idBAMCTSS
CNhs13508 DRZ011646 DRZ013031
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.0787
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C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13508

Jaspar motif P-value
MA0002.2 0.527
MA0003.1 0.191
MA0004.1 0.856
MA0006.1 0.253
MA0007.1 0.0122
MA0009.1 0.341
MA0014.1 0.00245
MA0017.1 0.753
MA0018.2 0.0393
MA0019.1 0.542
MA0024.1 0.00573
MA0025.1 0.563
MA0027.1 0.693
MA0028.1 0.331
MA0029.1 0.06
MA0030.1 0.381
MA0031.1 0.633
MA0035.2 0.494
MA0038.1 0.449
MA0039.2 3.10355e-4
MA0040.1 0.753
MA0041.1 0.51
MA0042.1 0.764
MA0043.1 0.111
MA0046.1 0.723
MA0047.2 0.648
MA0048.1 0.433
MA0050.1 0.0621
MA0051.1 0.456
MA0052.1 0.117
MA0055.1 0.782
MA0057.1 0.355
MA0058.1 0.73
MA0059.1 0.367
MA0060.1 0.166
MA0061.1 0.0905
MA0062.2 0.00131
MA0065.2 0.395
MA0066.1 0.424
MA0067.1 0.527
MA0068.1 2.05393e-4
MA0069.1 0.245
MA0070.1 0.815
MA0071.1 0.146
MA0072.1 0.583
MA0073.1 0.624
MA0074.1 0.0448
MA0076.1 0.0126
MA0077.1 0.164
MA0078.1 0.971
MA0079.2 0.379
MA0080.2 4.33007e-7
MA0081.1 0.00288
MA0083.1 0.649
MA0084.1 0.281
MA0087.1 0.55
MA0088.1 0.57
MA0090.1 0.667
MA0091.1 0.777
MA0092.1 0.799
MA0093.1 0.778
MA0099.2 1.21921e-23
MA0100.1 0.66
MA0101.1 0.00321
MA0102.2 0.418
MA0103.1 0.0302
MA0104.2 0.939
MA0105.1 0.261
MA0106.1 0.525
MA0107.1 0.00134
MA0108.2 0.026
MA0111.1 0.547
MA0112.2 0.349
MA0113.1 0.806
MA0114.1 0.977
MA0115.1 0.145
MA0116.1 0.992
MA0117.1 0.725
MA0119.1 0.405
MA0122.1 0.699
MA0124.1 0.86
MA0125.1 0.644
MA0131.1 0.674
MA0135.1 0.178
MA0136.1 1.75766e-7
MA0137.2 0.207
MA0138.2 0.339
MA0139.1 0.917
MA0140.1 0.872
MA0141.1 0.0401
MA0142.1 0.801
MA0143.1 0.539
MA0144.1 0.523
MA0145.1 0.306
MA0146.1 0.795
MA0147.1 0.847
MA0148.1 0.842
MA0149.1 0.0268
MA0150.1 0.00205
MA0152.1 0.104
MA0153.1 0.0424
MA0154.1 0.9
MA0155.1 0.937
MA0156.1 3.01825e-5
MA0157.1 0.859
MA0159.1 0.0849
MA0160.1 0.0241
MA0162.1 0.654
MA0163.1 0.0574
MA0164.1 0.196
MA0258.1 0.219
MA0259.1 0.084



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13508

Novel motif P-value
1 0.419
10 0.798
100 0.0228
101 0.779
102 0.778
103 0.342
104 0.501
105 0.906
106 0.246
107 0.549
108 0.615
109 0.0382
11 0.632
110 0.429
111 0.315
112 0.268
113 0.163
114 0.219
115 0.81
116 0.885
117 0.665
118 0.108
119 0.411
12 0.301
120 0.166
121 0.825
122 0.986
123 0.0807
124 0.547
125 0.229
126 0.705
127 0.0612
128 0.234
129 0.452
13 0.0657
130 0.792
131 0.672
132 0.492
133 0.0123
134 0.743
135 0.516
136 0.293
137 0.861
138 0.373
139 0.717
14 0.525
140 0.545
141 0.861
142 0.884
143 0.023
144 0.114
145 0.884
146 0.98
147 0.169
148 0.657
149 0.597
15 0.0282
150 0.212
151 0.949
152 0.0285
153 0.671
154 0.771
155 0.537
156 0.0565
157 0.678
158 0.835
159 0.738
16 0.342
160 0.956
161 0.782
162 0.387
163 0.268
164 0.983
165 0.904
166 0.327
167 0.0899
168 0.866
169 0.8
17 0.994
18 0.11
19 0.589
2 0.254
20 0.16
21 0.609
22 0.74
23 0.143
24 0.0376
25 0.668
26 0.292
27 0.312
28 0.61
29 0.131
3 0.825
30 0.857
31 0.985
32 0.276
33 0.00224
34 0.0242
35 0.913
36 0.39
37 0.0214
38 0.578
39 0.2
4 0.0746
40 0.0109
41 0.955
42 0.808
43 0.122
44 0.0184
45 0.679
46 0.286
47 0.916
48 0.869
49 0.2
5 0.279
50 0.411
51 0.815
52 0.238
53 0.0208
54 0.948
55 0.667
56 0.723
57 0.974
58 0.73
59 0.793
6 0.843
60 0.142
61 0.783
62 0.935
63 0.911
64 0.47
65 0.249
66 1.82374e-4
67 0.542
68 0.301
69 0.413
7 0.305
70 0.173
71 0.378
72 0.706
73 0.0223
74 0.793
75 0.854
76 0.216
77 0.432
78 0.452
79 0.585
8 0.0316
80 0.871
81 0.64
82 0.56
83 0.0162
84 0.921
85 0.0848
86 0.844
87 0.00664
88 0.997
89 0.869
9 0.414
90 0.654
91 0.836
92 0.864
93 0.919
94 0.941
95 0.0585
96 0.591
97 0.509
98 0.661
99 0.706



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs13508


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002149 (epithelial cell of uterus)
0002255 (stromal cell of endometrium)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
3001 (female reproductive endometrioid cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0103803 (serous adenocarcinoma cell line sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100658 (uterine adenocarcinoma cell sample)
0101555 (endometrial cancer cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)