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{{f5samples
{{f5samples
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|fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11869-125B6
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg38.nobarcode.ctss.bed.gz
|id=FF:11869-125B6
|id=FF:11869-125B6
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11869
|name=CD14+ monocytes - treated with B-glucan, donor1
|name=CD14+ monocytes - treated with B-glucan, donor1
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|rna_box=125
|rna_box=125
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=3.408615
|rna_weight_ug=3.408615
|sample_age=51
|sample_age=51
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.41956048438664e-269!GO:0005737;cytoplasm;1.59299231469034e-126!GO:0043227;membrane-bound organelle;2.05099150277952e-120!GO:0043231;intracellular membrane-bound organelle;3.53924739605342e-120!GO:0043226;organelle;1.28429867874106e-111!GO:0043229;intracellular organelle;6.71803642742061e-111!GO:0044444;cytoplasmic part;1.67604309038275e-84!GO:0005515;protein binding;1.11637674527396e-70!GO:0044422;organelle part;1.21232350997113e-69!GO:0044446;intracellular organelle part;4.00800644774405e-68!GO:0044237;cellular metabolic process;2.61565733311398e-65!GO:0044238;primary metabolic process;2.63244468852784e-65!GO:0043170;macromolecule metabolic process;7.52503381216353e-63!GO:0032991;macromolecular complex;7.65156338565707e-59!GO:0003723;RNA binding;4.13357053430672e-52!GO:0030529;ribonucleoprotein complex;3.27992561776508e-49!GO:0005634;nucleus;8.80224310499525e-49!GO:0019538;protein metabolic process;1.72009887705461e-46!GO:0044428;nuclear part;9.10910854313667e-46!GO:0033036;macromolecule localization;1.07206923745714e-43!GO:0015031;protein transport;9.2800949820284e-43!GO:0045184;establishment of protein localization;1.13925767669996e-42!GO:0044267;cellular protein metabolic process;1.80383511487953e-42!GO:0044260;cellular macromolecule metabolic process;3.75835084635548e-42!GO:0008104;protein localization;1.07212070797832e-40!GO:0006412;translation;8.74134213708858e-40!GO:0043233;organelle lumen;1.07084719015422e-37!GO:0031974;membrane-enclosed lumen;1.07084719015422e-37!GO:0005829;cytosol;2.79036604771413e-35!GO:0031090;organelle membrane;4.0363274286096e-34!GO:0043283;biopolymer metabolic process;5.45636911123827e-34!GO:0010467;gene expression;6.73365031500809e-34!GO:0006915;apoptosis;2.21224107098574e-31!GO:0012501;programmed cell death;2.31115569445556e-31!GO:0016071;mRNA metabolic process;9.64143646319914e-31!GO:0043234;protein complex;2.2549237118582e-30!GO:0008219;cell death;5.82230636673933e-30!GO:0016265;death;5.82230636673933e-30!GO:0009059;macromolecule biosynthetic process;5.99749940570514e-30!GO:0006396;RNA processing;8.9145716391715e-30!GO:0031981;nuclear lumen;1.70696036278246e-29!GO:0016043;cellular component organization and biogenesis;2.27973065815119e-28!GO:0046907;intracellular transport;2.97316157017011e-28!GO:0006886;intracellular protein transport;2.99460221934525e-28!GO:0009058;biosynthetic process;8.01767492514157e-28!GO:0044249;cellular biosynthetic process;1.65719191919792e-27!GO:0008380;RNA splicing;2.94825916725402e-27!GO:0005739;mitochondrion;7.15410303141925e-27!GO:0005840;ribosome;1.29437789249257e-26!GO:0006397;mRNA processing;1.99122764293722e-26!GO:0031967;organelle envelope;5.88227640737773e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.05915798526547e-24!GO:0031975;envelope;1.08610462257755e-24!GO:0003735;structural constituent of ribosome;1.26516997089048e-24!GO:0033279;ribosomal subunit;1.70379300065968e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.8014382695673e-23!GO:0065003;macromolecular complex assembly;7.03224845700419e-23!GO:0044445;cytosolic part;5.51347552272406e-22!GO:0005654;nucleoplasm;8.80515088563764e-22!GO:0051649;establishment of cellular localization;1.91443820689023e-21!GO:0042981;regulation of apoptosis;3.39751156336545e-21!GO:0008134;transcription factor binding;5.43369895980326e-21!GO:0043067;regulation of programmed cell death;6.98212197177208e-21!GO:0051641;cellular localization;7.80395480326874e-21!GO:0016192;vesicle-mediated transport;3.1338334773757e-20!GO:0044429;mitochondrial part;4.31145663922645e-20!GO:0005681;spliceosome;4.77210091988121e-20!GO:0022607;cellular component assembly;5.011675058848e-19!GO:0044451;nucleoplasm part;2.67859255368113e-18!GO:0007243;protein kinase cascade;5.79337519424189e-18!GO:0000166;nucleotide binding;8.45372041067566e-18!GO:0044265;cellular macromolecule catabolic process;3.04668914236251e-17!GO:0006119;oxidative phosphorylation;5.61796459135117e-17!GO:0048770;pigment granule;1.12091035336211e-16!GO:0042470;melanosome;1.12091035336211e-16!GO:0006512;ubiquitin cycle;1.19210155830611e-16!GO:0005740;mitochondrial envelope;2.61063201393553e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.12629810262673e-16!GO:0005773;vacuole;3.75742167412711e-16!GO:0048523;negative regulation of cellular process;3.91544345351981e-16!GO:0043412;biopolymer modification;5.78070052216026e-16!GO:0031966;mitochondrial membrane;7.27196688034673e-16!GO:0019866;organelle inner membrane;4.66102591855132e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.04082608012279e-15!GO:0022618;protein-RNA complex assembly;5.16153591475886e-15!GO:0016462;pyrophosphatase activity;5.41887318348737e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;6.37105500640784e-15!GO:0043285;biopolymer catabolic process;6.46147885618364e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.740772585454e-15!GO:0006464;protein modification process;6.78488609977257e-15!GO:0007242;intracellular signaling cascade;7.39371008878103e-15!GO:0016070;RNA metabolic process;7.53685759262466e-15!GO:0003676;nucleic acid binding;7.53685759262466e-15!GO:0017111;nucleoside-triphosphatase activity;8.9340005639823e-15!GO:0019941;modification-dependent protein catabolic process;1.1322499992764e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.1322499992764e-14!GO:0050794;regulation of cellular process;1.1495194873559e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.48414820502862e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.48585085745386e-14!GO:0044257;cellular protein catabolic process;1.58831588573302e-14!GO:0000323;lytic vacuole;1.67384875988362e-14!GO:0005764;lysosome;1.67384875988362e-14!GO:0006605;protein targeting;2.44908168753986e-14!GO:0043687;post-translational protein modification;2.62367263827243e-14!GO:0048519;negative regulation of biological process;2.74157347032638e-14!GO:0043069;negative regulation of programmed cell death;3.21805690120341e-14!GO:0043066;negative regulation of apoptosis;3.68533978699929e-14!GO:0002376;immune system process;3.92359468183739e-14!GO:0009057;macromolecule catabolic process;6.44574738612357e-14!GO:0016604;nuclear body;1.29996647733544e-13!GO:0006913;nucleocytoplasmic transport;1.81273251605943e-13!GO:0003712;transcription cofactor activity;2.41502781183242e-13!GO:0006996;organelle organization and biogenesis;2.49657023736945e-13!GO:0051169;nuclear transport;3.49621389406891e-13!GO:0065009;regulation of a molecular function;6.96265118333621e-13!GO:0005794;Golgi apparatus;7.6118872594164e-13!GO:0015934;large ribosomal subunit;7.6118872594164e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.03357182974229e-13!GO:0005743;mitochondrial inner membrane;1.08527356334295e-12!GO:0012505;endomembrane system;1.19329918049735e-12!GO:0044248;cellular catabolic process;1.23825302294489e-12!GO:0032553;ribonucleotide binding;1.37945275259911e-12!GO:0032555;purine ribonucleotide binding;1.37945275259911e-12!GO:0005768;endosome;1.6145011710972e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.70841389274025e-12!GO:0008135;translation factor activity, nucleic acid binding;1.73737522252768e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.46962729613302e-12!GO:0051246;regulation of protein metabolic process;3.32226599746756e-12!GO:0016607;nuclear speck;3.7274545141414e-12!GO:0006366;transcription from RNA polymerase II promoter;3.97930362218211e-12!GO:0017076;purine nucleotide binding;5.56425220089282e-12!GO:0006793;phosphorus metabolic process;6.50476019561076e-12!GO:0006796;phosphate metabolic process;6.50476019561076e-12!GO:0030163;protein catabolic process;7.70716762142816e-12!GO:0016874;ligase activity;8.39394992313463e-12!GO:0006950;response to stress;9.32133162376291e-12!GO:0050789;regulation of biological process;9.42896266657766e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.08432189717605e-11!GO:0015935;small ribosomal subunit;1.21655310910217e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.35236572404919e-11!GO:0006916;anti-apoptosis;1.617160117244e-11!GO:0006457;protein folding;1.79241233349721e-11!GO:0044455;mitochondrial membrane part;2.59126098983499e-11!GO:0003743;translation initiation factor activity;4.74433266070779e-11!GO:0006955;immune response;5.31623015910193e-11!GO:0016310;phosphorylation;1.766743574116e-10!GO:0006413;translational initiation;1.80703607184013e-10!GO:0006259;DNA metabolic process;1.84557893768046e-10!GO:0048193;Golgi vesicle transport;2.06490203376042e-10!GO:0065007;biological regulation;2.08022519525933e-10!GO:0048522;positive regulation of cellular process;4.04816202857596e-10!GO:0006446;regulation of translational initiation;4.54272608416775e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.15836288959029e-10!GO:0051186;cofactor metabolic process;6.05342883121285e-10!GO:0005746;mitochondrial respiratory chain;1.48621154940715e-09!GO:0031324;negative regulation of cellular metabolic process;1.4999298670182e-09!GO:0019829;cation-transporting ATPase activity;1.86135393628315e-09!GO:0048518;positive regulation of biological process;2.00676776561148e-09!GO:0008639;small protein conjugating enzyme activity;2.41727999600684e-09!GO:0051082;unfolded protein binding;2.42648332017274e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42648332017274e-09!GO:0050790;regulation of catalytic activity;2.58920249655247e-09!GO:0016787;hydrolase activity;2.73090756287307e-09!GO:0015986;ATP synthesis coupled proton transport;4.02310788256971e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.02310788256971e-09!GO:0019787;small conjugating protein ligase activity;4.02310788256971e-09!GO:0004842;ubiquitin-protein ligase activity;4.07375491186672e-09!GO:0005783;endoplasmic reticulum;5.42983044609158e-09!GO:0006417;regulation of translation;5.46653010233973e-09!GO:0009967;positive regulation of signal transduction;5.54112389611882e-09!GO:0005524;ATP binding;5.83624178201453e-09!GO:0017038;protein import;5.89194887697522e-09!GO:0005635;nuclear envelope;6.97159430663126e-09!GO:0050136;NADH dehydrogenase (quinone) activity;7.12806057000378e-09!GO:0003954;NADH dehydrogenase activity;7.12806057000378e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.12806057000378e-09!GO:0005770;late endosome;7.13129514525389e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.81290257282018e-09!GO:0006732;coenzyme metabolic process;7.88843504326861e-09!GO:0016564;transcription repressor activity;8.6213107447985e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;9.31633574159192e-09!GO:0000375;RNA splicing, via transesterification reactions;9.31633574159192e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.31633574159192e-09!GO:0032559;adenyl ribonucleotide binding;9.85008990752413e-09!GO:0051170;nuclear import;1.33854808043382e-08!GO:0019899;enzyme binding;2.11197292546541e-08!GO:0043065;positive regulation of apoptosis;2.22807746139764e-08!GO:0009056;catabolic process;2.28366248520094e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.02251527835592e-08!GO:0043068;positive regulation of programmed cell death;3.05251623643327e-08!GO:0009150;purine ribonucleotide metabolic process;3.07027922531905e-08!GO:0048468;cell development;3.07763834404017e-08!GO:0006606;protein import into nucleus;3.07763834404017e-08!GO:0009615;response to virus;3.10079302029599e-08!GO:0005730;nucleolus;3.21980167697211e-08!GO:0030554;adenyl nucleotide binding;3.86538718452736e-08!GO:0019222;regulation of metabolic process;3.89759752739866e-08!GO:0006163;purine nucleotide metabolic process;5.26244387856689e-08!GO:0006754;ATP biosynthetic process;5.26244387856689e-08!GO:0006753;nucleoside phosphate metabolic process;5.26244387856689e-08!GO:0009892;negative regulation of metabolic process;5.53434717055584e-08!GO:0006164;purine nucleotide biosynthetic process;5.83295009958781e-08!GO:0009889;regulation of biosynthetic process;5.83497407583045e-08!GO:0005774;vacuolar membrane;6.01537530577106e-08!GO:0008047;enzyme activator activity;6.0488472141027e-08!GO:0009259;ribonucleotide metabolic process;6.36697968831324e-08!GO:0016469;proton-transporting two-sector ATPase complex;7.72641195181291e-08!GO:0003713;transcription coactivator activity;8.50563997251411e-08!GO:0006461;protein complex assembly;9.2201107150998e-08!GO:0007049;cell cycle;9.74785689938534e-08!GO:0015078;hydrogen ion transmembrane transporter activity;9.81129292704148e-08!GO:0009607;response to biotic stimulus;1.07729209277864e-07!GO:0031326;regulation of cellular biosynthetic process;1.08034835787126e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.50184625375114e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.50184625375114e-07!GO:0051726;regulation of cell cycle;1.5325462021172e-07!GO:0009260;ribonucleotide biosynthetic process;1.5325462021172e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.5640882320884e-07!GO:0042773;ATP synthesis coupled electron transport;1.5640882320884e-07!GO:0008565;protein transporter activity;1.66454958649626e-07!GO:0016881;acid-amino acid ligase activity;1.82557738679135e-07!GO:0016044;membrane organization and biogenesis;1.92636525007179e-07!GO:0016887;ATPase activity;1.92636525007179e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.92923163983596e-07!GO:0045271;respiratory chain complex I;1.92923163983596e-07!GO:0005747;mitochondrial respiratory chain complex I;1.92923163983596e-07!GO:0044432;endoplasmic reticulum part;1.97163356770771e-07!GO:0000074;regulation of progression through cell cycle;1.97543671845016e-07!GO:0016481;negative regulation of transcription;2.05058241075118e-07!GO:0009055;electron carrier activity;2.20491040904171e-07!GO:0045786;negative regulation of progression through cell cycle;2.37260133140382e-07!GO:0046034;ATP metabolic process;2.43226232857628e-07!GO:0006917;induction of apoptosis;2.44710702517255e-07!GO:0042623;ATPase activity, coupled;2.5403833482847e-07!GO:0003924;GTPase activity;2.64229090369553e-07!GO:0031965;nuclear membrane;2.72246496441861e-07!GO:0007264;small GTPase mediated signal transduction;3.04572823404374e-07!GO:0044437;vacuolar part;3.04572823404374e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.37360204933624e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.37360204933624e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.42945208056928e-07!GO:0044453;nuclear membrane part;3.59117352975015e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;3.97207418379338e-07!GO:0012502;induction of programmed cell death;3.97207418379338e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.10854168515984e-07!GO:0044440;endosomal part;4.28738539821954e-07!GO:0010008;endosome membrane;4.28738539821954e-07!GO:0005765;lysosomal membrane;4.44582308613659e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.56900519297257e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.56900519297257e-07!GO:0043228;non-membrane-bound organelle;6.16954845048376e-07!GO:0043232;intracellular non-membrane-bound organelle;6.16954845048376e-07!GO:0031982;vesicle;7.06668402856961e-07!GO:0032446;protein modification by small protein conjugation;7.07074223764129e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.39075408920356e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.39075408920356e-07!GO:0005793;ER-Golgi intermediate compartment;7.41239550275453e-07!GO:0016568;chromatin modification;7.825857405608e-07!GO:0009199;ribonucleoside triphosphate metabolic process;9.53292248588066e-07!GO:0051188;cofactor biosynthetic process;1.14345137991948e-06!GO:0006323;DNA packaging;1.14345137991948e-06!GO:0005525;GTP binding;1.25892882872359e-06!GO:0016567;protein ubiquitination;1.37446881492307e-06!GO:0016563;transcription activator activity;1.75448028274716e-06!GO:0003714;transcription corepressor activity;2.04870801280994e-06!GO:0009108;coenzyme biosynthetic process;2.33014688081858e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.49741883969228e-06!GO:0009141;nucleoside triphosphate metabolic process;2.50178385773942e-06!GO:0050657;nucleic acid transport;2.8425597200174e-06!GO:0051236;establishment of RNA localization;2.8425597200174e-06!GO:0050658;RNA transport;2.8425597200174e-06!GO:0009966;regulation of signal transduction;3.11375857409016e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.31136154248327e-06!GO:0048475;coated membrane;3.53369348788263e-06!GO:0030117;membrane coat;3.53369348788263e-06!GO:0006403;RNA localization;3.67106589492524e-06!GO:0006752;group transfer coenzyme metabolic process;3.80808994025712e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.81193884198945e-06!GO:0031410;cytoplasmic vesicle;4.31005434202102e-06!GO:0031323;regulation of cellular metabolic process;4.36287222198827e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.56551625979086e-06!GO:0006897;endocytosis;4.6927596383421e-06!GO:0010324;membrane invagination;4.6927596383421e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.92601910779888e-06!GO:0005789;endoplasmic reticulum membrane;5.16954778953011e-06!GO:0005643;nuclear pore;7.25877907635134e-06!GO:0030120;vesicle coat;7.64904506178594e-06!GO:0030662;coated vesicle membrane;7.64904506178594e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.03083806529704e-06!GO:0031980;mitochondrial lumen;8.15429116537987e-06!GO:0005759;mitochondrial matrix;8.15429116537987e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.99038423493358e-06!GO:0031988;membrane-bound vesicle;9.36348075312466e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.36949724973822e-06!GO:0015399;primary active transmembrane transporter activity;9.36949724973822e-06!GO:0016197;endosome transport;1.28229171664759e-05!GO:0005769;early endosome;1.42037905243042e-05!GO:0031252;leading edge;1.58113970595821e-05!GO:0032561;guanyl ribonucleotide binding;2.1156574413288e-05!GO:0019001;guanyl nucleotide binding;2.1156574413288e-05!GO:0031902;late endosome membrane;2.2973783107146e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.33128007756499e-05!GO:0001816;cytokine production;2.4527566557065e-05!GO:0008026;ATP-dependent helicase activity;2.5923130981152e-05!GO:0004298;threonine endopeptidase activity;2.64417870775092e-05!GO:0006974;response to DNA damage stimulus;2.70506798804631e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.84501422539967e-05!GO:0051336;regulation of hydrolase activity;2.97415047394253e-05!GO:0008632;apoptotic program;2.97735416942662e-05!GO:0051028;mRNA transport;3.30466072496541e-05!GO:0009893;positive regulation of metabolic process;4.24868133815484e-05!GO:0004386;helicase activity;4.91206510747708e-05!GO:0030695;GTPase regulator activity;5.20213952284217e-05!GO:0030099;myeloid cell differentiation;5.20213952284217e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.70754545932913e-05!GO:0046822;regulation of nucleocytoplasmic transport;5.81723651059739e-05!GO:0005096;GTPase activator activity;5.93519757279049e-05!GO:0006401;RNA catabolic process;6.19086143566227e-05!GO:0006954;inflammatory response;6.44891253150119e-05!GO:0010468;regulation of gene expression;6.456003858275e-05!GO:0046930;pore complex;6.66236700192418e-05!GO:0045259;proton-transporting ATP synthase complex;7.02612337785708e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.13473963499225e-05!GO:0051276;chromosome organization and biogenesis;7.36483489762888e-05!GO:0051168;nuclear export;7.52668807985095e-05!GO:0043566;structure-specific DNA binding;7.71482026120256e-05!GO:0022402;cell cycle process;8.58641878256213e-05!GO:0051338;regulation of transferase activity;8.58641878256213e-05!GO:0009060;aerobic respiration;9.72967985248833e-05!GO:0000151;ubiquitin ligase complex;9.99491223523913e-05!GO:0032940;secretion by cell;0.000105204292737927!GO:0043492;ATPase activity, coupled to movement of substances;0.000106740349046294!GO:0003724;RNA helicase activity;0.000108581821624526!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000114808830531101!GO:0044431;Golgi apparatus part;0.000118108786066944!GO:0005798;Golgi-associated vesicle;0.000129517035570175!GO:0004674;protein serine/threonine kinase activity;0.000132899283843863!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000138144255288797!GO:0006613;cotranslational protein targeting to membrane;0.000138238985901677!GO:0046519;sphingoid metabolic process;0.000154217873756514!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000157137933579388!GO:0006818;hydrogen transport;0.000165043350665245!GO:0030036;actin cytoskeleton organization and biogenesis;0.00019133414184015!GO:0043549;regulation of kinase activity;0.00019792500864269!GO:0051789;response to protein stimulus;0.00020913902280197!GO:0006986;response to unfolded protein;0.00020913902280197!GO:0001726;ruffle;0.000215860929626686!GO:0005885;Arp2/3 protein complex;0.000225009158568043!GO:0051427;hormone receptor binding;0.00022506976035621!GO:0015992;proton transport;0.000233516997777994!GO:0005057;receptor signaling protein activity;0.000236016142593608!GO:0043085;positive regulation of catalytic activity;0.000241609075573468!GO:0003697;single-stranded DNA binding;0.000245760230237681!GO:0006672;ceramide metabolic process;0.000270134341510154!GO:0007050;cell cycle arrest;0.000273334822039717!GO:0051223;regulation of protein transport;0.000277430259971747!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000281079074698212!GO:0051707;response to other organism;0.000287649332376779!GO:0000245;spliceosome assembly;0.000307740911192215!GO:0045859;regulation of protein kinase activity;0.000321507956222796!GO:0022890;inorganic cation transmembrane transporter activity;0.000337730854252489!GO:0045333;cellular respiration;0.000348870190767825!GO:0008234;cysteine-type peptidase activity;0.000351616926768923!GO:0045892;negative regulation of transcription, DNA-dependent;0.000351616926768923!GO:0030532;small nuclear ribonucleoprotein complex;0.000354239630619192!GO:0006281;DNA repair;0.000361980779640954!GO:0035257;nuclear hormone receptor binding;0.000370809933955516!GO:0065002;intracellular protein transport across a membrane;0.000370809933955516!GO:0030097;hemopoiesis;0.000378844348196256!GO:0045941;positive regulation of transcription;0.000400031010285733!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00040575867110946!GO:0007034;vacuolar transport;0.00043666948284146!GO:0006402;mRNA catabolic process;0.000474015210339936!GO:0006952;defense response;0.000479657680580877!GO:0033157;regulation of intracellular protein transport;0.000489598408257593!GO:0042306;regulation of protein import into nucleus;0.000489598408257593!GO:0007040;lysosome organization and biogenesis;0.00051129530229581!GO:0065004;protein-DNA complex assembly;0.000554349059670882!GO:0008654;phospholipid biosynthetic process;0.000561523142886583!GO:0005083;small GTPase regulator activity;0.000587045725055656!GO:0006350;transcription;0.000610682513831945!GO:0031325;positive regulation of cellular metabolic process;0.000625934360752514!GO:0043281;regulation of caspase activity;0.000634462803089939!GO:0009117;nucleotide metabolic process;0.000640829950701353!GO:0007005;mitochondrion organization and biogenesis;0.000642257333229495!GO:0006643;membrane lipid metabolic process;0.000657696156124295!GO:0006919;caspase activation;0.000674012421542317!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00070447797637436!GO:0007041;lysosomal transport;0.000722446266495285!GO:0002757;immune response-activating signal transduction;0.000728743604429121!GO:0046983;protein dimerization activity;0.000746252920788009!GO:0045321;leukocyte activation;0.000760994637504943!GO:0003729;mRNA binding;0.000786996861525291!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000823387045411294!GO:0043280;positive regulation of caspase activity;0.000831733913731493!GO:0016740;transferase activity;0.000831733913731493!GO:0005667;transcription factor complex;0.000896532246848478!GO:0051090;regulation of transcription factor activity;0.000904853254249024!GO:0045893;positive regulation of transcription, DNA-dependent;0.000909844858421056!GO:0005761;mitochondrial ribosome;0.000909844858421056!GO:0000313;organellar ribosome;0.000909844858421056!GO:0007265;Ras protein signal transduction;0.000919905407109453!GO:0042254;ribosome biogenesis and assembly;0.000919917680684679!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00096532512079031!GO:0008186;RNA-dependent ATPase activity;0.00100454722365682!GO:0007033;vacuole organization and biogenesis;0.00101996095817177!GO:0002764;immune response-regulating signal transduction;0.0010546275951082!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00108662441014322!GO:0060090;molecular adaptor activity;0.00111902401054336!GO:0033116;ER-Golgi intermediate compartment membrane;0.00130252378350486!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00134034008700366!GO:0042990;regulation of transcription factor import into nucleus;0.00139580086623061!GO:0042991;transcription factor import into nucleus;0.00139580086623061!GO:0009719;response to endogenous stimulus;0.0014526750174493!GO:0043623;cellular protein complex assembly;0.00150943455732634!GO:0030029;actin filament-based process;0.00152117457474627!GO:0045637;regulation of myeloid cell differentiation;0.00153399792918838!GO:0006612;protein targeting to membrane;0.00158511518947428!GO:0045454;cell redox homeostasis;0.00162572457393078!GO:0022415;viral reproductive process;0.00165694085275195!GO:0002274;myeloid leukocyte activation;0.00169987205259779!GO:0008383;manganese superoxide dismutase activity;0.00191095426622495!GO:0001315;age-dependent response to reactive oxygen species;0.00191095426622495!GO:0000139;Golgi membrane;0.00201099890285046!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00208920000019133!GO:0044262;cellular carbohydrate metabolic process;0.00211518447631063!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00213492062169284!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00214796965022625!GO:0005741;mitochondrial outer membrane;0.00226638832004071!GO:0030218;erythrocyte differentiation;0.00251588914010337!GO:0042110;T cell activation;0.00258670681111619!GO:0005637;nuclear inner membrane;0.00261819720463859!GO:0004004;ATP-dependent RNA helicase activity;0.00277420917420279!GO:0001817;regulation of cytokine production;0.0027853598339993!GO:0030149;sphingolipid catabolic process;0.00284244979562547!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0028703100714736!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00290308933330294!GO:0030658;transport vesicle membrane;0.00294737943470892!GO:0007259;JAK-STAT cascade;0.00296637050078201!GO:0045045;secretory pathway;0.00307181394925476!GO:0006099;tricarboxylic acid cycle;0.00308747199452289!GO:0046356;acetyl-CoA catabolic process;0.00308747199452289!GO:0016301;kinase activity;0.00317490086782208!GO:0019904;protein domain specific binding;0.00341614949544012!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00344093190858965!GO:0048487;beta-tubulin binding;0.00345238932245995!GO:0016251;general RNA polymerase II transcription factor activity;0.00351450725049211!GO:0006891;intra-Golgi vesicle-mediated transport;0.00367540343808994!GO:0046966;thyroid hormone receptor binding;0.00385892522189816!GO:0009165;nucleotide biosynthetic process;0.00389581658906312!GO:0006091;generation of precursor metabolites and energy;0.00413214323728465!GO:0043087;regulation of GTPase activity;0.00417005424071892!GO:0018193;peptidyl-amino acid modification;0.00419266877373012!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00425402239636157!GO:0006352;transcription initiation;0.0043110746012701!GO:0051187;cofactor catabolic process;0.00441173145936571!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00481278402638715!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00484914755277513!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00484914755277513!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00484914755277513!GO:0051345;positive regulation of hydrolase activity;0.00502887035812198!GO:0009611;response to wounding;0.00502887035812198!GO:0019377;glycolipid catabolic process;0.00505357968068522!GO:0006333;chromatin assembly or disassembly;0.00505452285346277!GO:0031901;early endosome membrane;0.00510063484364365!GO:0031072;heat shock protein binding;0.00520202392776167!GO:0042802;identical protein binding;0.00520202392776167!GO:0032386;regulation of intracellular transport;0.00551707986311115!GO:0004185;serine carboxypeptidase activity;0.00576958838875515!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00584125875325351!GO:0004812;aminoacyl-tRNA ligase activity;0.00584125875325351!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00584125875325351!GO:0030660;Golgi-associated vesicle membrane;0.00596709942438102!GO:0002520;immune system development;0.00618233328791566!GO:0030118;clathrin coat;0.00628885215084908!GO:0043021;ribonucleoprotein binding;0.00642354819870744!GO:0048471;perinuclear region of cytoplasm;0.00645197066519956!GO:0048534;hemopoietic or lymphoid organ development;0.00647376848918523!GO:0006399;tRNA metabolic process;0.00651554087579889!GO:0033367;protein localization in mast cell secretory granule;0.00651554087579889!GO:0033365;protein localization in organelle;0.00651554087579889!GO:0033371;T cell secretory granule organization and biogenesis;0.00651554087579889!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00651554087579889!GO:0033375;protease localization in T cell secretory granule;0.00651554087579889!GO:0042629;mast cell granule;0.00651554087579889!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00651554087579889!GO:0033364;mast cell secretory granule organization and biogenesis;0.00651554087579889!GO:0033380;granzyme B localization in T cell secretory granule;0.00651554087579889!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00651554087579889!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00651554087579889!GO:0033368;protease localization in mast cell secretory granule;0.00651554087579889!GO:0033366;protein localization in secretory granule;0.00651554087579889!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00651554087579889!GO:0033374;protein localization in T cell secretory granule;0.00651554087579889!GO:0030041;actin filament polymerization;0.00668846548775204!GO:0019867;outer membrane;0.00676912885830233!GO:0004197;cysteine-type endopeptidase activity;0.00716717341178202!GO:0001775;cell activation;0.0071732759673765!GO:0005099;Ras GTPase activator activity;0.00729994281401446!GO:0030134;ER to Golgi transport vesicle;0.00753740875122786!GO:0016791;phosphoric monoester hydrolase activity;0.00765314860845209!GO:0031968;organelle outer membrane;0.00765314860845209!GO:0006611;protein export from nucleus;0.00797811447734074!GO:0006084;acetyl-CoA metabolic process;0.00801655396903806!GO:0006458;'de novo' protein folding;0.00822681063707124!GO:0051084;'de novo' posttranslational protein folding;0.00822681063707124!GO:0005070;SH3/SH2 adaptor activity;0.00822681063707124!GO:0043433;negative regulation of transcription factor activity;0.00826876930227644!GO:0016779;nucleotidyltransferase activity;0.00826876930227644!GO:0031625;ubiquitin protein ligase binding;0.00827250201505475!GO:0003690;double-stranded DNA binding;0.00860518616995397!GO:0030127;COPII vesicle coat;0.00860518616995397!GO:0012507;ER to Golgi transport vesicle membrane;0.00860518616995397!GO:0043038;amino acid activation;0.00860518616995397!GO:0006418;tRNA aminoacylation for protein translation;0.00860518616995397!GO:0043039;tRNA aminoacylation;0.00860518616995397!GO:0051252;regulation of RNA metabolic process;0.00876592482141839!GO:0006607;NLS-bearing substrate import into nucleus;0.0088813836412687!GO:0005813;centrosome;0.00888732792017601!GO:0030133;transport vesicle;0.00893248851567854!GO:0005484;SNAP receptor activity;0.0093290752075933!GO:0046649;lymphocyte activation;0.0094918062369669!GO:0002237;response to molecule of bacterial origin;0.00961854989275818!GO:0006468;protein amino acid phosphorylation;0.0101485006425972!GO:0002521;leukocyte differentiation;0.0105754997585766!GO:0009109;coenzyme catabolic process;0.0105754997585766!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0105928346911254!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0106263242717086!GO:0046479;glycosphingolipid catabolic process;0.0107414930336296!GO:0043621;protein self-association;0.0110302303484185!GO:0045449;regulation of transcription;0.0118280803924443!GO:0016363;nuclear matrix;0.0118748932200683!GO:0051092;activation of NF-kappaB transcription factor;0.0120929148134315!GO:0045646;regulation of erythrocyte differentiation;0.0125838475101286!GO:0008139;nuclear localization sequence binding;0.0127596070809415!GO:0005048;signal sequence binding;0.0128575340392216!GO:0016072;rRNA metabolic process;0.0135011922068318!GO:0019882;antigen processing and presentation;0.0136154711593864!GO:0000082;G1/S transition of mitotic cell cycle;0.0138607213672713!GO:0050851;antigen receptor-mediated signaling pathway;0.0139901363932377!GO:0046467;membrane lipid biosynthetic process;0.0139901363932377!GO:0006650;glycerophospholipid metabolic process;0.014238151349449!GO:0032763;regulation of mast cell cytokine production;0.0146262279436255!GO:0032762;mast cell cytokine production;0.0146262279436255!GO:0008624;induction of apoptosis by extracellular signals;0.0149048179823428!GO:0000785;chromatin;0.0149791262675386!GO:0019079;viral genome replication;0.0150791716940197!GO:0030176;integral to endoplasmic reticulum membrane;0.0154064528828234!GO:0000209;protein polyubiquitination;0.0154064528828234!GO:0008637;apoptotic mitochondrial changes;0.0154340250557093!GO:0006665;sphingolipid metabolic process;0.015509496135223!GO:0030258;lipid modification;0.0156117823323934!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0156117823323934!GO:0002819;regulation of adaptive immune response;0.0156117823323934!GO:0001819;positive regulation of cytokine production;0.0157679107947158!GO:0006351;transcription, DNA-dependent;0.0161157832773172!GO:0006364;rRNA processing;0.0165645271149458!GO:0003702;RNA polymerase II transcription factor activity;0.0166162175318414!GO:0032774;RNA biosynthetic process;0.0169112713374977!GO:0051059;NF-kappaB binding;0.0171460709807006!GO:0045792;negative regulation of cell size;0.0171552896255838!GO:0030518;steroid hormone receptor signaling pathway;0.0176030879426186!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0176913320890132!GO:0005815;microtubule organizing center;0.0177979935852178!GO:0030521;androgen receptor signaling pathway;0.0177979935852178!GO:0048500;signal recognition particle;0.0178465412564971!GO:0002467;germinal center formation;0.0178718014537353!GO:0030503;regulation of cell redox homeostasis;0.0179797751772763!GO:0046466;membrane lipid catabolic process;0.0182378611903093!GO:0050811;GABA receptor binding;0.0183101761706874!GO:0006354;RNA elongation;0.0184855109310288!GO:0051098;regulation of binding;0.0185588528841935!GO:0019220;regulation of phosphate metabolic process;0.0191381889696883!GO:0051174;regulation of phosphorus metabolic process;0.0191381889696883!GO:0006749;glutathione metabolic process;0.01934224170666!GO:0033673;negative regulation of kinase activity;0.0196924557729881!GO:0006469;negative regulation of protein kinase activity;0.0196924557729881!GO:0019883;antigen processing and presentation of endogenous antigen;0.019914236720341!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0201358271559199!GO:0030100;regulation of endocytosis;0.0201907263190474!GO:0002444;myeloid leukocyte mediated immunity;0.0202095035755099!GO:0005905;coated pit;0.0205756883460399!GO:0006644;phospholipid metabolic process;0.0208325111861861!GO:0002252;immune effector process;0.0209287370926533!GO:0030308;negative regulation of cell growth;0.0210233125557577!GO:0051247;positive regulation of protein metabolic process;0.0211249818305376!GO:0015631;tubulin binding;0.0212066507550832!GO:0004177;aminopeptidase activity;0.0217317128470665!GO:0043022;ribosome binding;0.0218624516738558!GO:0008361;regulation of cell size;0.0224801034586714!GO:0042613;MHC class II protein complex;0.0225407977003802!GO:0000165;MAPKKK cascade;0.0230224438429767!GO:0006914;autophagy;0.0230544206946229!GO:0032318;regulation of Ras GTPase activity;0.0231272556010886!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0231272556010886!GO:0000287;magnesium ion binding;0.0235145314808713!GO:0051348;negative regulation of transferase activity;0.0235265659367175!GO:0030867;rough endoplasmic reticulum membrane;0.0237522651207497!GO:0042348;NF-kappaB import into nucleus;0.023845808278209!GO:0042345;regulation of NF-kappaB import into nucleus;0.023845808278209!GO:0051085;chaperone cofactor-dependent protein folding;0.0238607156162543!GO:0050900;leukocyte migration;0.0239770128208608!GO:0017166;vinculin binding;0.024237016076105!GO:0045639;positive regulation of myeloid cell differentiation;0.0243367823324776!GO:0019901;protein kinase binding;0.0243676363016701!GO:0002224;toll-like receptor signaling pathway;0.0244372966386351!GO:0002221;pattern recognition receptor signaling pathway;0.0244372966386351!GO:0030663;COPI coated vesicle membrane;0.0244439299106061!GO:0030126;COPI vesicle coat;0.0244439299106061!GO:0004860;protein kinase inhibitor activity;0.02458412343113!GO:0051091;positive regulation of transcription factor activity;0.0246964126232916!GO:0000339;RNA cap binding;0.0249478682147429!GO:0030119;AP-type membrane coat adaptor complex;0.0251204981250696!GO:0051347;positive regulation of transferase activity;0.0251204981250696!GO:0015923;mannosidase activity;0.0251221223562856!GO:0002440;production of molecular mediator of immune response;0.025196744616077!GO:0030137;COPI-coated vesicle;0.0252988738279152!GO:0051049;regulation of transport;0.0253195437938244!GO:0043488;regulation of mRNA stability;0.0254889513248011!GO:0043487;regulation of RNA stability;0.0254889513248011!GO:0006405;RNA export from nucleus;0.0255910968890994!GO:0019843;rRNA binding;0.0256564087636232!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0260697754571654!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0260697754571654!GO:0048002;antigen processing and presentation of peptide antigen;0.0260697754571654!GO:0019318;hexose metabolic process;0.02660273735246!GO:0003725;double-stranded RNA binding;0.02660273735246!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.027305304454313!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0274025659565544!GO:0045047;protein targeting to ER;0.0274025659565544!GO:0017091;AU-rich element binding;0.0274982419003104!GO:0050779;RNA destabilization;0.0274982419003104!GO:0000289;poly(A) tail shortening;0.0274982419003104!GO:0030384;phosphoinositide metabolic process;0.027588109183404!GO:0043300;regulation of leukocyte degranulation;0.0280909655566111!GO:0044255;cellular lipid metabolic process;0.0281009331840641!GO:0016311;dephosphorylation;0.0281271842955411!GO:0015036;disulfide oxidoreductase activity;0.0281271842955411!GO:0002250;adaptive immune response;0.0291052485799659!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0291052485799659!GO:0004722;protein serine/threonine phosphatase activity;0.0291413927373777!GO:0035035;histone acetyltransferase binding;0.0298552599444233!GO:0008286;insulin receptor signaling pathway;0.0300576910740792!GO:0031327;negative regulation of cellular biosynthetic process;0.0302002387734268!GO:0033033;negative regulation of myeloid cell apoptosis;0.0302002387734268!GO:0001803;regulation of type III hypersensitivity;0.0302002387734268!GO:0032733;positive regulation of interleukin-10 production;0.0302002387734268!GO:0033025;regulation of mast cell apoptosis;0.0302002387734268!GO:0001805;positive regulation of type III hypersensitivity;0.0302002387734268!GO:0033023;mast cell homeostasis;0.0302002387734268!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0302002387734268!GO:0033032;regulation of myeloid cell apoptosis;0.0302002387734268!GO:0001802;type III hypersensitivity;0.0302002387734268!GO:0033028;myeloid cell apoptosis;0.0302002387734268!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0302002387734268!GO:0033026;negative regulation of mast cell apoptosis;0.0302002387734268!GO:0033024;mast cell apoptosis;0.0302002387734268!GO:0005869;dynactin complex;0.0302748106898839!GO:0006414;translational elongation;0.0310788283711398!GO:0003746;translation elongation factor activity;0.0312347261603185!GO:0008287;protein serine/threonine phosphatase complex;0.0312844880605808!GO:0030027;lamellipodium;0.0313315391032862!GO:0006689;ganglioside catabolic process;0.0313626464504979!GO:0005996;monosaccharide metabolic process;0.0314346655677483!GO:0032760;positive regulation of tumor necrosis factor production;0.0319589258499298!GO:0051101;regulation of DNA binding;0.0319718083537336!GO:0042221;response to chemical stimulus;0.0321923425867559!GO:0045576;mast cell activation;0.0323228801941238!GO:0051235;maintenance of localization;0.0326668443602263!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0328437465846373!GO:0006516;glycoprotein catabolic process;0.0335518367961318!GO:0002718;regulation of cytokine production during immune response;0.0337502603274587!GO:0002367;cytokine production during immune response;0.0337502603274587!GO:0002700;regulation of production of molecular mediator of immune response;0.0337502603274587!GO:0005669;transcription factor TFIID complex;0.0338251569721303!GO:0005694;chromosome;0.0338701423778525!GO:0045113;regulation of integrin biosynthetic process;0.0349977624185769!GO:0045112;integrin biosynthetic process;0.0349977624185769!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0355533159550406!GO:0030131;clathrin adaptor complex;0.035925428957305!GO:0000118;histone deacetylase complex;0.0364914098023328!GO:0008312;7S RNA binding;0.0366557648728415!GO:0006509;membrane protein ectodomain proteolysis;0.0367955707962679!GO:0033619;membrane protein proteolysis;0.0367955707962679!GO:0008656;caspase activator activity;0.0368892136815124!GO:0042611;MHC protein complex;0.0372814213644711!GO:0005149;interleukin-1 receptor binding;0.0376101744062195!GO:0008625;induction of apoptosis via death domain receptors;0.0391411211602333!GO:0019210;kinase inhibitor activity;0.0393442178873633!GO:0030433;ER-associated protein catabolic process;0.0395555793171113!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0395555793171113!GO:0045746;negative regulation of Notch signaling pathway;0.0400301204134049!GO:0045309;protein phosphorylated amino acid binding;0.0402113421394893!GO:0005788;endoplasmic reticulum lumen;0.0402113421394893!GO:0007162;negative regulation of cell adhesion;0.040265217679182!GO:0019058;viral infectious cycle;0.0405308630637168!GO:0051329;interphase of mitotic cell cycle;0.0408027072384574!GO:0006376;mRNA splice site selection;0.0413299055907824!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0413299055907824!GO:0043299;leukocyte degranulation;0.0413961671024211!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0417563190250956!GO:0042092;T-helper 2 type immune response;0.0421840237473687!GO:0051050;positive regulation of transport;0.0423976944419781!GO:0050727;regulation of inflammatory response;0.042496826337329!GO:0031347;regulation of defense response;0.042496826337329!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0427950447498041!GO:0008270;zinc ion binding;0.0428171881229813!GO:0051052;regulation of DNA metabolic process;0.0428635169811924!GO:0002697;regulation of immune effector process;0.0429767288831582!GO:0048146;positive regulation of fibroblast proliferation;0.043027609631595!GO:0004704;NF-kappaB-inducing kinase activity;0.0433145856626645!GO:0016049;cell growth;0.0436937604057766!GO:0042108;positive regulation of cytokine biosynthetic process;0.0437741471146929!GO:0003727;single-stranded RNA binding;0.0437912716561642!GO:0004563;beta-N-acetylhexosaminidase activity;0.0443587615527525!GO:0032640;tumor necrosis factor production;0.044373033964486!GO:0008333;endosome to lysosome transport;0.0448096067903916!GO:0051325;interphase;0.0458297640658445!GO:0009306;protein secretion;0.0458297640658445!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0458297640658445!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0460888522242309!GO:0045603;positive regulation of endothelial cell differentiation;0.0461405477626081!GO:0048872;homeostasis of number of cells;0.0469100183532439!GO:0004218;cathepsin S activity;0.0471123724865458!GO:0006007;glucose catabolic process;0.0472682538166961!GO:0001562;response to protozoan;0.0472682538166961!GO:0048144;fibroblast proliferation;0.0473816120320379!GO:0048145;regulation of fibroblast proliferation;0.0473816120320379!GO:0046426;negative regulation of JAK-STAT cascade;0.0489019720732455!GO:0008629;induction of apoptosis by intracellular signals;0.0489707623150811
|sample_id=11869
|sample_id=11869
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=
|sample_tissue=
|top_motifs=NFE2L2:3.61166284728;NFE2:3.55104605596;CEBPA,B_DDIT3:3.40857250745;FOSL2:3.40709924997;BACH2:3.3017291014;FOS_FOS{B,L1}_JUN{B,D}:3.26888706741;SREBF1,2:3.19420498304;PAX2:3.17780067225;HLF:2.96531498198;SPIB:2.95486144479;SPI1:2.90705465126;NFE2L1:2.59025226645;ETS1,2:2.4068483029;NFKB1_REL_RELA:2.39216337574;EP300:2.36302804963;NFIL3:2.27954134901;NANOG{mouse}:2.27210607923;FOXP3:2.24142162368;DMAP1_NCOR{1,2}_SMARC:2.20395921315;ATF5_CREB3:2.13027638746;ATF4:2.04252961487;NR1H4:2.00196566377;FOXN1:1.93241994929;RXRA_VDR{dimer}:1.84556019065;RUNX1..3:1.76707608618;CREB1:1.63780376838;IRF1,2:1.5320736887;ATF6:1.50379210989;ELF1,2,4:1.33450629597;HMX1:1.31100552373;JUN:1.30977403314;MAFB:1.28643074997;PDX1:1.21002632295;TGIF1:1.13524989388;FOXD3:1.124219642;STAT2,4,6:1.08285832148;PPARG:1.06129465816;HMGA1,2:1.03056980438;PAX3,7:0.998401433916;IRF7:0.996765426132;BPTF:0.944664445439;ALX4:0.917199936237;PITX1..3:0.896884813662;HIF1A:0.837887252296;TFCP2:0.821042421757;ALX1:0.73136742442;HSF1,2:0.727124854331;GLI1..3:0.724448029159;ATF2:0.671488032631;ZBTB16:0.664503685516;NFATC1..3:0.589634605891;HES1:0.548245619042;HOX{A5,B5}:0.526691422911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.519491934968;PAX8:0.509346423661;SMAD1..7,9:0.505376628025;HBP1_HMGB_SSRP1_UBTF:0.488919450891;ESR1:0.486798083613;CDX1,2,4:0.466592486954;ESRRA:0.464271014953;PAX1,9:0.428592868649;NR6A1:0.401401840655;XBP1:0.339959786669;NANOG:0.326620100725;EN1,2:0.253324517817;FOXO1,3,4:0.24862925849;GATA4:0.237906091387;TLX2:0.219187824053;SPZ1:0.218161940163;SRF:0.105956073187;MYB:0.103259189521;IKZF2:0.102918483796;PRDM1:0.102058865291;FOXM1:-0.00190186591304;FOXP1:-0.0324758902498;T:-0.0414813439201;RFX2..5_RFXANK_RFXAP:-0.0574820930814;FOX{D1,D2}:-0.0780638832302;TBP:-0.11718054424;AHR_ARNT_ARNT2:-0.158326063852;PAX4:-0.160275326485;DBP:-0.162078992935;FOXL1:-0.233049337615;HOXA9_MEIS1:-0.257829378694;MEF2{A,B,C,D}:-0.257996054461;NKX2-2,8:-0.306943014314;STAT5{A,B}:-0.313844463341;FOX{F1,F2,J1}:-0.31412976248;POU2F1..3:-0.330701333592;IKZF1:-0.352316832465;POU5F1:-0.394229539298;MZF1:-0.431203610423;OCT4_SOX2{dimer}:-0.437136566013;NFIX:-0.469722765633;TFAP4:-0.507119331724;EGR1..3:-0.521979497945;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.584794748406;TBX4,5:-0.585428783849;NKX3-1:-0.700558535369;RREB1:-0.706774783453;HNF4A_NR2F1,2:-0.721283512584;REST:-0.744140378108;MYFfamily:-0.780345708591;RXR{A,B,G}:-0.786298993411;NKX3-2:-0.80898577301;ZNF148:-0.852241138074;HNF1A:-0.856364690651;PAX6:-0.873526826051;VSX1,2:-0.874356213925;POU6F1:-0.876790227365;PATZ1:-0.879238077041;ZNF238:-0.886535768297;ZBTB6:-0.905790612311;TAL1_TCF{3,4,12}:-0.911029782722;SOX2:-0.955014699398;GZF1:-1.00035617283;NHLH1,2:-1.04594620284;MED-1{core}:-1.06906520564;MTE{core}:-1.10608345533;PRRX1,2:-1.12423027442;TFAP2{A,C}:-1.14470764251;GTF2A1,2:-1.1574068127;ZIC1..3:-1.1891720721;GATA6:-1.19115444561;NKX6-1,2:-1.1985081874;STAT1,3:-1.21202225984;ZFP161:-1.21900986693;MYOD1:-1.26067921393;TEF:-1.2688009253;CUX2:-1.30327716411;GCM1,2:-1.320386283;TLX1..3_NFIC{dimer}:-1.36427603105;RFX1:-1.38706517703;UFEwm:-1.38819980441;TOPORS:-1.38944873748;MTF1:-1.39854978357;SOX5:-1.40467833191;XCPE1{core}:-1.41780896499;FOXA2:-1.43595114705;RBPJ:-1.45068366206;TFAP2B:-1.46422459567;SP1:-1.46828606297;NR3C1:-1.47894641476;TEAD1:-1.4798095954;TFDP1:-1.51053064238;TP53:-1.51116108276;ONECUT1,2:-1.52080382856;AIRE:-1.52258867188;EBF1:-1.52913652078;SOX{8,9,10}:-1.53205399507;ZEB1:-1.54729889048;ZNF384:-1.54847997971;E2F1..5:-1.56323009308;KLF4:-1.56458766563;GTF2I:-1.57030226706;ZNF423:-1.57072865057;MAZ:-1.57705200378;CRX:-1.58865636449;ARID5B:-1.59062872419;POU3F1..4:-1.59572232044;RORA:-1.62751802108;NKX2-1,4:-1.63411047257;HOX{A4,D4}:-1.64707570367;EVI1:-1.71743249275;ELK1,4_GABP{A,B1}:-1.74300240721;SNAI1..3:-1.78915629408;HOX{A6,A7,B6,B7}:-1.79926235533;HIC1:-1.8030398169;BREu{core}:-1.83239204245;ADNP_IRX_SIX_ZHX:-1.8615717442;NKX2-3_NKX2-5:-1.87534940053;CDC5L:-1.9603260806;LMO2:-2.01830929016;MYBL2:-2.06874930295;FOX{I1,J2}:-2.0843753093;PAX5:-2.10908980943;AR:-2.17842156428;POU1F1:-2.26311869721;SOX17:-2.27511709747;NR5A1,2:-2.29375348657;bHLH_family:-2.29669033371;GFI1B:-2.31755028792;FOXQ1:-2.36686121165;NFY{A,B,C}:-2.48001614935;YY1:-2.48197780544;PBX1:-2.48821924873;LHX3,4:-2.64153840148;HAND1,2:-2.71457709503;GFI1:-2.7360234283;NRF1:-2.78062441828;ZNF143:-3.21365850472;LEF1_TCF7_TCF7L1,2:-3.43315726121
|top_motifs=NFE2L2:3.61166284728;NFE2:3.55104605596;CEBPA,B_DDIT3:3.40857250745;FOSL2:3.40709924997;BACH2:3.3017291014;FOS_FOS{B,L1}_JUN{B,D}:3.26888706741;SREBF1,2:3.19420498304;PAX2:3.17780067225;HLF:2.96531498198;SPIB:2.95486144479;SPI1:2.90705465126;NFE2L1:2.59025226645;ETS1,2:2.4068483029;NFKB1_REL_RELA:2.39216337574;EP300:2.36302804963;NFIL3:2.27954134901;NANOG{mouse}:2.27210607923;FOXP3:2.24142162368;DMAP1_NCOR{1,2}_SMARC:2.20395921315;ATF5_CREB3:2.13027638746;ATF4:2.04252961487;NR1H4:2.00196566377;FOXN1:1.93241994929;RXRA_VDR{dimer}:1.84556019065;RUNX1..3:1.76707608618;CREB1:1.63780376838;IRF1,2:1.5320736887;ATF6:1.50379210989;ELF1,2,4:1.33450629597;HMX1:1.31100552373;JUN:1.30977403314;MAFB:1.28643074997;PDX1:1.21002632295;TGIF1:1.13524989388;FOXD3:1.124219642;STAT2,4,6:1.08285832148;PPARG:1.06129465816;HMGA1,2:1.03056980438;PAX3,7:0.998401433916;IRF7:0.996765426132;BPTF:0.944664445439;ALX4:0.917199936237;PITX1..3:0.896884813662;HIF1A:0.837887252296;TFCP2:0.821042421757;ALX1:0.73136742442;HSF1,2:0.727124854331;GLI1..3:0.724448029159;ATF2:0.671488032631;ZBTB16:0.664503685516;NFATC1..3:0.589634605891;HES1:0.548245619042;HOX{A5,B5}:0.526691422911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.519491934968;PAX8:0.509346423661;SMAD1..7,9:0.505376628025;HBP1_HMGB_SSRP1_UBTF:0.488919450891;ESR1:0.486798083613;CDX1,2,4:0.466592486954;ESRRA:0.464271014953;PAX1,9:0.428592868649;NR6A1:0.401401840655;XBP1:0.339959786669;NANOG:0.326620100725;EN1,2:0.253324517817;FOXO1,3,4:0.24862925849;GATA4:0.237906091387;TLX2:0.219187824053;SPZ1:0.218161940163;SRF:0.105956073187;MYB:0.103259189521;IKZF2:0.102918483796;PRDM1:0.102058865291;FOXM1:-0.00190186591304;FOXP1:-0.0324758902498;T:-0.0414813439201;RFX2..5_RFXANK_RFXAP:-0.0574820930814;FOX{D1,D2}:-0.0780638832302;TBP:-0.11718054424;AHR_ARNT_ARNT2:-0.158326063852;PAX4:-0.160275326485;DBP:-0.162078992935;FOXL1:-0.233049337615;HOXA9_MEIS1:-0.257829378694;MEF2{A,B,C,D}:-0.257996054461;NKX2-2,8:-0.306943014314;STAT5{A,B}:-0.313844463341;FOX{F1,F2,J1}:-0.31412976248;POU2F1..3:-0.330701333592;IKZF1:-0.352316832465;POU5F1:-0.394229539298;MZF1:-0.431203610423;OCT4_SOX2{dimer}:-0.437136566013;NFIX:-0.469722765633;TFAP4:-0.507119331724;EGR1..3:-0.521979497945;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.584794748406;TBX4,5:-0.585428783849;NKX3-1:-0.700558535369;RREB1:-0.706774783453;HNF4A_NR2F1,2:-0.721283512584;REST:-0.744140378108;MYFfamily:-0.780345708591;RXR{A,B,G}:-0.786298993411;NKX3-2:-0.80898577301;ZNF148:-0.852241138074;HNF1A:-0.856364690651;PAX6:-0.873526826051;VSX1,2:-0.874356213925;POU6F1:-0.876790227365;PATZ1:-0.879238077041;ZNF238:-0.886535768297;ZBTB6:-0.905790612311;TAL1_TCF{3,4,12}:-0.911029782722;SOX2:-0.955014699398;GZF1:-1.00035617283;NHLH1,2:-1.04594620284;MED-1{core}:-1.06906520564;MTE{core}:-1.10608345533;PRRX1,2:-1.12423027442;TFAP2{A,C}:-1.14470764251;GTF2A1,2:-1.1574068127;ZIC1..3:-1.1891720721;GATA6:-1.19115444561;NKX6-1,2:-1.1985081874;STAT1,3:-1.21202225984;ZFP161:-1.21900986693;MYOD1:-1.26067921393;TEF:-1.2688009253;CUX2:-1.30327716411;GCM1,2:-1.320386283;TLX1..3_NFIC{dimer}:-1.36427603105;RFX1:-1.38706517703;UFEwm:-1.38819980441;TOPORS:-1.38944873748;MTF1:-1.39854978357;SOX5:-1.40467833191;XCPE1{core}:-1.41780896499;FOXA2:-1.43595114705;RBPJ:-1.45068366206;TFAP2B:-1.46422459567;SP1:-1.46828606297;NR3C1:-1.47894641476;TEAD1:-1.4798095954;TFDP1:-1.51053064238;TP53:-1.51116108276;ONECUT1,2:-1.52080382856;AIRE:-1.52258867188;EBF1:-1.52913652078;SOX{8,9,10}:-1.53205399507;ZEB1:-1.54729889048;ZNF384:-1.54847997971;E2F1..5:-1.56323009308;KLF4:-1.56458766563;GTF2I:-1.57030226706;ZNF423:-1.57072865057;MAZ:-1.57705200378;CRX:-1.58865636449;ARID5B:-1.59062872419;POU3F1..4:-1.59572232044;RORA:-1.62751802108;NKX2-1,4:-1.63411047257;HOX{A4,D4}:-1.64707570367;EVI1:-1.71743249275;ELK1,4_GABP{A,B1}:-1.74300240721;SNAI1..3:-1.78915629408;HOX{A6,A7,B6,B7}:-1.79926235533;HIC1:-1.8030398169;BREu{core}:-1.83239204245;ADNP_IRX_SIX_ZHX:-1.8615717442;NKX2-3_NKX2-5:-1.87534940053;CDC5L:-1.9603260806;LMO2:-2.01830929016;MYBL2:-2.06874930295;FOX{I1,J2}:-2.0843753093;PAX5:-2.10908980943;AR:-2.17842156428;POU1F1:-2.26311869721;SOX17:-2.27511709747;NR5A1,2:-2.29375348657;bHLH_family:-2.29669033371;GFI1B:-2.31755028792;FOXQ1:-2.36686121165;NFY{A,B,C}:-2.48001614935;YY1:-2.48197780544;PBX1:-2.48821924873;LHX3,4:-2.64153840148;HAND1,2:-2.71457709503;GFI1:-2.7360234283;NRF1:-2.78062441828;ZNF143:-3.21365850472;LEF1_TCF7_TCF7L1,2:-3.43315726121
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11869-125B6;search_select_hide=table117:FF:11869-125B6
}}
}}

Latest revision as of 18:25, 4 June 2020

Name:CD14+ monocytes - treated with B-glucan, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13474
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age51
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD3-10
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005846
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13474 CAGE DRX008135 DRR009007
Accession ID Hg19

Library idBAMCTSS
CNhs13474 DRZ000432 DRZ001817
Accession ID Hg38

Library idBAMCTSS
CNhs13474 DRZ011782 DRZ013167
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.419
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0658
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.604
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.496
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
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C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.23
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13474

Jaspar motifP-value
MA0002.28.23847e-8
MA0003.10.366
MA0004.10.323
MA0006.10.946
MA0007.10.689
MA0009.10.224
MA0014.11
MA0017.10.0559
MA0018.20.12
MA0019.10.513
MA0024.10.00154
MA0025.10.00697
MA0027.10.848
MA0028.10.127
MA0029.10.244
MA0030.10.146
MA0031.10.322
MA0035.20.237
MA0038.10.102
MA0039.20.732
MA0040.10.456
MA0041.10.549
MA0042.10.71
MA0043.15.86409e-6
MA0046.10.0102
MA0047.20.604
MA0048.10.792
MA0050.13.39288e-5
MA0051.10.045
MA0052.10.0422
MA0055.10.951
MA0057.10.545
MA0058.10.143
MA0059.10.19
MA0060.14.04544e-11
MA0061.11.1148e-7
MA0062.20.642
MA0065.20.0101
MA0066.10.0244
MA0067.14.15791e-5
MA0068.10.199
MA0069.10.729
MA0070.10.0207
MA0071.10.304
MA0072.10.903
MA0073.10.416
MA0074.10.112
MA0076.10.103
MA0077.10.19
MA0078.10.436
MA0079.20.298
MA0080.22.66749e-14
MA0081.12.38443e-4
MA0083.10.77
MA0084.10.753
MA0087.10.966
MA0088.10.54
MA0090.10.224
MA0091.10.537
MA0092.10.287
MA0093.10.361
MA0099.24.73723e-41
MA0100.10.646
MA0101.11.23186e-7
MA0102.21.67667e-8
MA0103.10.365
MA0104.20.584
MA0105.17.57421e-11
MA0106.10.79
MA0107.13.0725e-9
MA0108.20.0647
MA0111.10.509
MA0112.25.05272e-5
MA0113.10.934
MA0114.10.154
MA0115.10.884
MA0116.13.64894e-4
MA0117.10.16
MA0119.10.246
MA0122.10.928
MA0124.10.572
MA0125.10.225
MA0131.10.45
MA0135.10.631
MA0136.14.6437e-15
MA0137.20.728
MA0138.20.897
MA0139.10.93
MA0140.10.153
MA0141.10.0887
MA0142.10.699
MA0143.10.825
MA0144.10.158
MA0145.10.258
MA0146.10.118
MA0147.10.679
MA0148.10.574
MA0149.10.18
MA0150.12.0963e-18
MA0152.10.787
MA0153.10.001
MA0154.10.00114
MA0155.10.685
MA0156.11.17605e-7
MA0157.10.879
MA0159.10.0194
MA0160.10.0419
MA0162.10.725
MA0163.14.19248e-8
MA0164.10.532
MA0258.10.00386
MA0259.10.674



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13474

Novel motifP-value
10.118
100.0212
1000.899
1010.849
1020.726
1030.273
1040.562
1050.182
1065.28675e-4
1070.168
1080.935
1090.241
110.136
1100.24
1110.0283
1120.305
1130.517
1140.0107
1150.23
1160.786
1170.0415
1180.179
1190.123
120.311
1200.948
1210.623
1220.7
1230.0762
1240.544
1250.374
1260.171
1270.358
1280.0241
1290.447
130.154
1300.16
1310.76
1320.0719
1330.805
1340.495
1350.584
1360.934
1370.0121
1380.269
1390.0385
140.433
1400.117
1410.266
1420.0907
1430.0157
1440.564
1450.365
1460.545
1470.544
1480.00776
1490.651
150.169
1500.463
1510.333
1520.157
1530.514
1540.635
1550.619
1560.528
1570.368
1580.038
1590.473
160.319
1600.373
1610.521
1620.412
1630.14
1640.073
1650.196
1660.614
1670.219
1680.263
1690.00637
170.164
180.113
190.336
20.838
200.284
210.525
220.242
230.042
240.322
250.425
260.035
270.795
280.458
290.24
30.0916
300.49
310.714
320.933
330.334
340.547
350.116
360.124
370.0729
380.348
390.782
40.975
400.172
410.00682
420.378
430.0315
440.942
450.672
460.14
470.518
480.439
490.106
50.259
500.969
510.398
520.315
530.391
540.339
550.43
560.607
570.814
580.141
590.134
60.541
600.0447
610.636
620.0649
630.472
640.4
650.206
660.212
670.454
680.666
690.556
70.275
700.0219
710.0285
720.283
730.134
740.0798
750.0915
760.181
770.401
780.102
790.344
80.336
800.311
810.364
820.107
830.0518
840.233
850.0115
860.051
870.523
880.641
890.164
90.37
900.0615
910.313
920.219
930.579
940.0399
950.315
960.36
970.809
980.109
990.0996



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13474


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000630 (beta-glucan treatment sample)
0011102 (human CD14-positive monocytes - treated with B-glucan sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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