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(Created page with "{{f5samples |id=FF:11911-125G3 |name=CD14-CD16+ Monocytes, donor3 |sample_id=11911 |rna_tube_id=125G3 |rna_box=125 |rna_position=G3 |sample_cell_lot= |sample_cell_catalog= |sa...")
 
 
(29 intermediate revisions by the same user not shown)
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{{f5samples
 
{{f5samples
|id=FF:11911-125G3
+
|DRA_sample_Accession=CAGE@SAMD00005535
|name=CD14-CD16+ Monocytes, donor3
+
|accession_numbers=CAGE;DRX008169;DRR009041;DRZ000466;DRZ001851;DRZ011816;DRZ013201
|sample_id=11911
+
|ancestors_in_anatomy_facet=
|rna_tube_id=125G3
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000875,CL:0002396
|rna_box=125
 
|rna_position=G3
 
|sample_cell_lot=
 
|sample_cell_catalog=
 
|sample_company=
 
|rna_lot_number=43-44
 
|rna_catalog_number=
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=
 
|sample_tissue=blood
 
|sample_donor(cell lot)=
 
|sample_sex=male
 
|sample_age=23
 
|sample_ethnicity=
 
|rna_rin=
 
|rna_od260/230=1.34
 
|rna_od260/280=1.98
 
|sample_cell_type=monocyte
 
|sample_cell_line=
 
|sample_collaboration=Michael Rehli (University of Regensberg)
 
|sample_experimental_condition=
 
|sample_disease=
 
|rna_sample_type=total RNA
 
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
 
|rna_weight_ug=2.1042
 
|rna_concentration=0.21042
 
|sample_note=
 
|profile_hcage=CNhs13548,LSID1033,release012,COMPLETED
 
|profile_cagescan=
 
|profile_srnaseq=
 
|profile_rnaseq=
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000875,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371,CL:0002393,CL:0002396,CL:0002397
 
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
 
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
|sample_description=
+
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011100
 +
|comment=
 +
|created_by=
 +
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 +
|def=
 +
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.75!560.23!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.61!404.60!SPI1;;chr7:50344289..50344323,+!p1@IKZF1!2.18!148.69!IKZF1;;chr16:85932760..85932775,+!p1@IRF8!2.12!130.06!IRF8;;chr11:47400062..47400077,-!p2@SPI1!2.03!105.21!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.91!81.10!SPI1;;chr12:54778351..54778378,-!p6@ZNF385A!1.72!51.15!ZNF385A;;chr2:145277640..145277771,-!p1@ZEB2!1.66!562.42!ZEB2;;chr19:13213662..13213686,-!p1@LYL1!1.66!65.21!LYL1;;chr11:47400032..47400043,-!p5@SPI1!1.65!43.47!SPI1;;chr20:39317868..39317884,-!p1@MAFB!1.63!463.78!MAFB;;chr12:54778471..54778528,-!p1@ZNF385A!1.62!40.73!ZNF385A;;chr11:47399996..47400014,-!p4@SPI1!1.59!38.18!SPI1;;chr1:212873084..212873137,-!p2@BATF3!1.52!31.97!BATF3;;chr19:33793430..33793447,-!p1@CEBPA!1.50!124.03!CEBPA;;chr11:47399920..47399931,-!p7@SPI1!1.50!30.69!SPI1;;chr5:176735063..176735088,-!p2@MXD3!1.49!29.59!MXD3;;chrX:106960180..106960197,-!p2@TSC22D3!1.48!107.22!TSC22D3;;chr11:47400045..47400060,-!p6@SPI1!1.48!28.86!SPI1;;chr7:128577972..128578047,+!p1@IRF5!1.44!41.46!IRF5;;chr14:75745523..75745537,+!p1@FOS!1.40!2762.06!FOS;;chr5:88178983..88179012,-!p1@MEF2C!1.39!175.54!MEF2C;;chr19:16435625..16435682,+!p1@KLF2!1.38!713.12!KLF2;;chr10:114710098..114710130,+!p2@TCF7L2!1.36!158.19!TCF7L2;;chr1:25256756..25256774,-!p1@RUNX3!1.35!39.64!RUNX3;;chr7:50343634..50343717,+!p2@IKZF1!1.35!21.37!IKZF1;;chr9:110252035..110252057,-!p1@KLF4!1.33!314.00!KLF4;;chr1:212873061..212873080,-!p4@BATF3!1.31!19.55!BATF3;;chr2:231090433..231090469,+!p1@SP140!1.28!18.08!SP140;;chr10:51572408..51572454,+!p3@NCOA4!1.27!100.83!NCOA4;;chr10:94449703..94449718,+!p1@HHEX!1.27!67.04!HHEX;;chr19:42636586..42636607,-!p1@POU2F2!1.23!44.20!POU2F2;;chrX:106960221..106960236,-!p3@TSC22D3!1.23!43.66!TSC22D3;;chr20:48807456..48807475,+!p3@CEBPB!1.23!30.50!CEBPB;;chr1:25256439..25256476,-!p3@RUNX3!1.23!16.07!RUNX3;;chr3:101568349..101568365,+!p1@NFKBIZ!1.22!790.39!NFKBIZ;;chr10:114709999..114710031,+!p1@TCF7L2!1.22!365.15!TCF7L2;;chr9:110250697..110250738,-!p2@KLF4!1.21!18.08!KLF4;;chr21:34442439..34442455,+!p1@OLIG1!1.21!15.16!OLIG1;;chr2:145271342..145271377,-!p5@ZEB2!1.19!14.61!ZEB2;;chrX:106960249..106960260,-!p5@TSC22D3!1.18!22.47!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.17!13.88!KDM5D;;chr21:30672433..30672464,+!p6@BACH1!1.17!13.70!BACH1;;chr11:128563948..128564003,+!p1@FLI1!1.16!162.02!FLI1;;chr2:28618532..28618610,+!p4@FOSL2!1.16!23.20!FOSL2;;chr2:68592394..68592405,+!p2@PLEK!1.16!13.33!PLEK;;chr19:45971246..45971265,+!p1@FOSB!1.14!238.56!FOSB;;chr21:30671690..30671762,+!p2@BACH1!1.14!43.47!BACH1;;chr10:3827371..3827386,-!p2@KLF6!1.12!103.21!KLF6;;chr2:208394817..208394834,+!p3@CREB1!1.10!46.40!CREB1;;chr8:71316428..71316459,-!p2@NCOA2!1.10!19.55!NCOA2;;chr10:35416142..35416169,+!p3@CREM!1.09!30.14!CREM;;chr13:41593425..41593480,-!p1@ELF1!1.06!67.59!ELF1;;chr2:238600933..238600985,+!p3@LRRFIP1!1.06!57.90!LRRFIP1;;chrX:106960285..106960299,-!p1@TSC22D3!1.04!268.15!TSC22D3;;chr7:77428066..77428132,+!p2@PHTF2!1.04!65.03!PHTF2;;chr12:54694758..54694805,-!p1@NFE2!1.04!12.24!NFE2;;chr5:131826457..131826514,-!p1@IRF1!1.03!388.16!IRF1;;chr2:231090471..231090504,+!p2@SP140!1.03!9.68!SP140;;chr19:12902289..12902307,+!p1@JUNB!1.01!2173.52!JUNB;;chr18:51751066..51751077,-!p6@MBD2!1.01!14.07!MBD2;;chr4:185395633..185395651,-!p2@IRF2!1.00!14.61!IRF2;;chr12:72056800..72056834,+!p1@THAP2!0.98!11.51!THAP2;;chr2:61108695..61108753,+!p1@REL!0.97!59.00!REL;;chr10:94449675..94449694,+!p2@HHEX!0.97!22.83!HHEX;;chr9:110251836..110251887,-!p4@KLF4!0.97!11.14!KLF4;;chr2:208031943..208031978,-!p5@KLF7!0.96!10.96!KLF7;;chr20:56195474..56195506,-!p1@ZBP1!0.96!8.04!ZBP1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.95!128.05!MIS18BP1;;chr9:137217986..137218049,+!p3@RXRA!0.95!23.56!RXRA;;chr20:48807430..48807439,+!p8@CEBPB!0.95!12.24!CEBPB;;chr17:38497662..38497713,+!p4@RARA!0.95!9.32!RARA;;chr2:238600998..238601013,+!p5@LRRFIP1!0.95!7.85!LRRFIP1;;chr19:45579725..45579743,-!p1@ZNF296!0.94!35.62!ZNF296;;chr4:185395590..185395627,-!p3@IRF2!0.94!9.68!IRF2;;chr7:50344251..50344288,+!p3@IKZF1!0.93!7.49!IKZF1;;chr21:34442540..34442560,+!p2@OLIG1!0.93!7.49!OLIG1;;chr2:231084659..231084721,-!p1@SP110!0.92!176.64!SP110;;chr21:30671235..30671253,+!p1@BACH1!0.92!96.81!BACH1;;chr5:88179017..88179046,-!p2@MEF2C!0.92!30.50!MEF2C;;chr19:13213954..13214021,-!p4@LYL1!0.92!7.31!LYL1;;chr1:158978768..158978800,+!p8@IFI16!0.92!7.31!IFI16;;chr20:48807351..48807384,+!p1@CEBPB!0.91!756.23!CEBPB;;chr4:38665810..38665827,+!p1@KLF3!0.91!108.14!KLF3;;chr2:157189180..157189290,-!p1@NR4A2!0.90!37.45!NR4A2;;chr10:114710060..114710069,+!p5@TCF7L2!0.90!12.06!TCF7L2;;chr5:142782823..142782854,-!p3@NR3C1!0.90!10.23!NR3C1;;chr4:185395191..185395226,-!p4@IRF2!0.90!9.86!IRF2;;chr12:72056773..72056796,+!p3@THAP2!0.90!9.13!THAP2;;chr13:41593392..41593403,-!p7@ELF1!0.90!6.94!ELF1;;chr7:115670804..115670825,-!p1@TFEC!0.90!6.94!TFEC;;chr2:70142232..70142251,+!p1@MXD1!0.89!40.00!MXD1;;chr17:38498402..38498445,+!p3@RARA!0.89!25.39!RARA;;chr18:77155922..77155939,+!p1@NFATC1!0.89!19.36!NFATC1;;chr12:52445218..52445237,+!p1@NR4A1!0.88!87.50!NR4A1;;chr4:38665769..38665801,+!p2@KLF3!0.88!63.02!KLF3;;chr4:106068026..106068084,+!p1@TET2!0.88!62.29!TET2;;chr6:144385698..144385742,-!p2@PLAGL1!0.88!8.04!PLAGL1;;chr10:114886551..114886601,+!p11@TCF7L2!0.88!6.58!TCF7L2;;chr2:157198916..157198978,-!p2@NR4A2!0.87!23.56!NR4A2;;chr8:37553292..37553317,+!p1@ZNF703!0.86!158.37!ZNF703;;chrX:129244840..129244881,-!p2@ELF4!0.85!24.48!ELF4;;chr1:158979872..158979898,+!p3@IFI16!0.85!19.55!IFI16;;chr17:38498594..38498661,+!p2@RARA!0.84!21.19!RARA;;chr14:64971288..64971316,-!p2@ZBTB25!0.84!19.36!ZBTB25;;chr9:110252074..110252079,-!p3@KLF4!0.84!10.05!KLF4;;chr10:114710083..114710092,+!p8@TCF7L2!0.84!8.04!TCF7L2;;chr2:61108808..61108821,+!p3@REL!0.84!7.67!REL;;chr10:135044190..135044229,+!p3@UTF1!0.84!5.85!UTF1;;chr2:208031542..208031595,-!p2@KLF7!0.83!43.47!KLF7;;chr16:31885093..31885165,+!p1@ZNF267!0.82!92.79!ZNF267;;chr2:185463247..185463263,+!p1@ZNF804A!0.82!10.23!ZNF804A;;chr19:16435735..16435773,+!p4@KLF2!0.82!5.66!KLF2;;chrX:70712265..70712303,+!p4@TAF1!0.82!5.66!TAF1;;chr9:117150254..117150271,-!p1@AKNA!0.81!15.71!AKNA;;chr1:935398..935465,-!p2@HES4!0.81!11.87!HES4;;chr22:21771656..21771662,+!p1@HIC2!0.81!5.48!HIC2;;chr2:8822176..8822196,+!p1@ID2!0.80!820.89!ID2;;chr18:51750948..51751059,-!p1@MBD2!0.80!184.49!MBD2;;chr20:56195525..56195556,-!p2@ZBP1!0.80!5.30!ZBP1;;chr11:615942..615957,-!p1@IRF7!0.79!53.16!IRF7;;chr10:104154246..104154347,+!p3@NFKB2!0.79!34.71!NFKB2;;chr20:48807648..48807671,+!p9@CEBPB!0.79!7.67!CEBPB;;chr19:45972701..45972774,+!p2@FOSB!0.79!7.31!FOSB;;chr10:31288398..31288455,-!p2@ZNF438!0.78!6.03!ZNF438;;chrX:101186981..101187030,-!p1@ZMAT1!0.77!17.35!ZMAT1;;chr19:42627037..42627084,-!p3@POU2F2!0.77!4.93!POU2F2;;chr6:170862932..170862947,+!p5@TBP!0.77!4.93!TBP;;chr6:44355499..44355514,+!p3@CDC5L!0.76!5.30!CDC5L;;chr8:48650697..48650708,-!p2@CEBPD!0.75!38.54!CEBPD;;chr2:61108650..61108687,+!p2@REL!0.75!25.02!REL;;chr10:43932296..43932360,+!p1@ZNF487P!0.75!10.41!ZNF487P;;chr10:114710218..114710229,+!p4@TCF7L2!0.75!9.86!TCF7L2;;chr14:75746722..75746777,+!p2@FOS!0.75!6.03!FOS;;chr15:90544182..90544195,+!p7@ZNF710!0.75!4.57!ZNF710;;chr11:2292226..2292270,-!p1@ASCL2!0.75!4.57!ASCL2;;chr6:130339710..130339745,+!p1@L3MBTL3!0.74!39.82!L3MBTL3;;chr9:88969339..88969422,-!p2@ZCCHC6!0.74!38.72!ZCCHC6;;chr2:145277882..145277967,-!p3@ZEB2!0.74!8.22!ZEB2;;chr1:44679370..44679422,+!p3@DMAP1!0.74!6.21!DMAP1;;chr6:44233252..44233296,-!p1@NFKBIE!0.73!48.04!NFKBIE;;chr8:71316021..71316068,-!p1@NCOA2!0.73!45.48!NCOA2;;chr17:40440481..40440550,+!p1@STAT5A!0.73!35.07!STAT5A;;chrX:129244454..129244488,-!p1@ELF4!0.73!34.89!ELF4;;chr1:935467..935484,-!p1@HES4!0.73!21.55!HES4;;chr21:30671189..30671207,+!p4@BACH1!0.73!16.99!BACH1;;chr19:4067174..4067200,-!p9@ZBTB7A!0.73!5.48!ZBTB7A;;chr13:41593405..41593416,-!p9@ELF1!0.73!4.38!ELF1;;chrY:2803415..2803468,+!p1@ZFY!0.73!4.38!ZFY;;chr2:10183651..10183713,+!p1@KLF11!0.72!34.52!KLF11;;chr12:72056749..72056767,+!p6@THAP2!0.72!4.75!THAP2;;chr6:108880956..108881011,+!p1@FOXO3!0.71!30.87!FOXO3;;chr10:51572339..51572376,+!p4@NCOA4!0.71!10.23!NCOA4;;chr9:88969303..88969335,-!p1@ZCCHC6!0.70!42.74!ZCCHC6;;chr5:172483347..172483407,+!p1@C5orf41!0.70!33.98!CREBRF;;chr6:28092375..28092412,+!p1@ZSCAN16!0.70!18.63!ZSCAN16;;chr6:41040923..41040952,+!p2@NFYA!0.70!11.69!NFYA;;chr20:48807875..48807982,+!p2@CEBPB!0.69!98.46!CEBPB;;chr19:49140609..49140643,-!p1@DBP!0.69!25.02!DBP;;chr1:40367530..40367597,-!p1@MYCL1!0.69!7.67!MYCL1;;chr2:48541789..48541874,+!p1@FOXN2!0.68!99.00!FOXN2;;chr5:176738887..176738934,-!p1@MXD3!0.68!29.04!MXD3;;chr9:117160738..117160782,-!p2@AKNA!0.68!17.72!AKNA;;chr2:60780607..60780624,-!p2@BCL11A!0.68!12.97!BCL11A;;chr2:145274981..145274994,-!p9@ZEB2!0.68!5.85!ZEB2;;chr14:75988771..75988826,+!p1@BATF!0.68!5.30!BATF;;chr19:13213704..13213726,-!p3@LYL1!0.67!5.11!LYL1;;chr19:10416315..10416333,-!p1@ZGLP1!0.67!3.65!ZGLP1;;chr19:13213691..13213696,-!p9@LYL1!0.67!3.65!LYL1;;chr6:391743..391759,+!p1@IRF4!0.67!3.65!IRF4;;chr14:24630465..24630531,+!p1@IRF9!0.66!160.01!IRF9;;chr3:39195075..39195088,-!p1@CSRNP1!0.66!25.94!CSRNP1;;chr2:60780753..60780800,-!p1@BCL11A!0.66!19.91!BCL11A;;chr4:106067811..106067854,+!p2@TET2!0.66!19.00!TET2;;chr16:3313791..3313834,+!p2@ZNF263!0.66!8.77!ZNF263;;chr3:101546827..101546847,+!p2@NFKBIZ!0.66!5.30!NFKBIZ;;chr2:176033066..176033087,-!p2@ATF2!0.66!4.75!ATF2;;chr3:187463248..187463264,-!p1@BCL6!0.65!87.86!BCL6;;chr9:3525727..3525828,-!p2@RFX3!0.65!9.86!RFX3;;chr1:158979851..158979865,+!p5@IFI16!0.65!8.40!IFI16;;chr18:51750414..51750449,-!p5@MBD2!0.65!7.31!MBD2;;chr20:48807615..48807644,+!p6@CEBPB!0.65!6.21!CEBPB;;chr1:161014760..161014788,-!p4@USF1!0.65!3.47!USF1;;chr2:145275982..145276003,-!p7@ZEB2!0.65!3.47!ZEB2;;chr2:145277632..145277638,-!p17@ZEB2!0.65!3.47!ZEB2;;chr12:54694807..54694832,-!p3@NFE2!0.65!3.47!NFE2;;chr10:3827389..3827408,-!p1@KLF6!0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 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002396;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
 +
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 66: Line 41:
 
|fonse_treatment=
 
|fonse_treatment=
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
|top_motifs=
+
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor3.CNhs13548.11911-125G3.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor3.CNhs13548.11911-125G3.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor3.CNhs13548.11911-125G3.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor3.CNhs13548.11911-125G3.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor3.CNhs13548.11911-125G3.hg38.nobarcode.ctss.bed.gz
 +
|id=FF:11911-125G3
 +
|is_a=EFO:0002091;;FF:0011100
 +
|is_obsolete=
 +
|library_id=CNhs13548
 +
|library_id_phase_based=2:CNhs13548
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11911
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11911
 +
|name=CD14-CD16+ Monocytes, donor3
 +
|namespace=
 +
|part_of=
 +
|profile_cagescan=
 +
|profile_hcage=CNhs13548,LSID1033,release012,COMPLETED
 +
|profile_rnaseq=
 +
|profile_srnaseq=
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0.0948844206713595,0,0,0.0728614336604499,0,0.121469755650105,0,-0.190736881233106,0.310389252332245,0,0,0,0,0,0,0,0,0,0.0728614336604499,0.135237094603344,0,0,0.084887896360612,0,0,0,0,0,0.0372791983352863,0,0,0.460620363779428,0,0,0,0,0,0,0,0.0728614336604499,0,0,0,0,-0.0295683719530858,0.109750373074081,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.321388154237037,0,-0.10535245091327,0,0.224395792994432,0,0.0728614336604499,0.324914108737653,0,0.314688896421911,0,0,0,0,0,0.00123885867700635,0.0728614336604499,0,1.46161279581631,0,0,0.632250195478005,0,0,0,0,0.036430716830225,0,0,0.0385860780067487,0,-0.0733504884037417,-0.432274013869315,0,0,0,-0.0584468268118252,-0.143578855394197,0,0,0.160694077118518,0,-0.0980353512377064,0.137082932614029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0227318594320588,0,0,0,-0.0291271477979856,-0.0936326285156418,0,0,0.0222815818611596,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0.135237094603344,0,0.0728614336604499,0,0,0,0,0,0,-0.00896796857652488,0,-0.338849124148665,0.177873011713565,0.036430716830225,0.281787785736491,-0.188045933659387,0,0,0,0,0,0,0.135237094603344,0,0,-0.128119866952565,0.135237094603344,-0.0504125515893149,0,0,0.0455457428118712,0,0,-0.0672613241893677,0,-0.137827344319285,0.00451717258308168,0,0,0,0,-0.0835166686781329,0,0.0688893575489786,0.395746138176949,0,-0.543679877676825,0.226075288955309,0,0,0,-0.503201342301122,-1.01837891339289,0,0,0.178764203904834,0.527864448199485,0,0,-0.391044581551635,0,-0.450101346968661,-0.0517432564335094,0,-0.207139173544513,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.0887776899699293,-0.0304099808375785,0,0,-0.0563638323550114,-0.336416909088602,0,-0.0138323107379372,-0.238049061353223,-0.350736013296859,0.00768700523411815,-0.788958086043456,0,0.807295777290446,0.028421832615443,-0.169614693955793,0.111726979319416,-0.147401849371139,-0.189981719549847,0,-0.390444735667114,-0.0701627680618351,-0.00277623550150727,0.0165541940428293,-0.204854032625392,-1.2314085082871,-0.204594456562883,0,0,-0.0775089264793031,-0.261085007358141,0,-0.103968203991747,-0.208326928740282,-0.0553184929003945,-0.40687409764923,0.205788312805477,-0.289162132152471,0.322663729019156,-0.0395325284566706,0.489730464159375,-0.176486866616927,-0.4215723249037,0,0,-0.0366308862699836,0.064188345200757,-0.281853327228034,1.27876456698484,-0.031957346157762,0.247122724565717,0.0668928335259756,0.036430716830225,-0.589433619114299,-0.0407583496152644,0,0,-0.296989445134921,0,0,0,0,0,-0.0856593068857456,0.220120410404101,0.271203218323744,0,-0.264611194008333,-0.157449019425251,-0.229667533050915,0,0.055943530100527,0.0193353591190002,0.0289371646430353,-0.078523089417098,0,-0.269366096768723,-0.192603089068825,-0.164990696339003,-0.287157710788394,-0.0584468268118252,0.251129935219469,0.0779871378116251,-0.433034938355628,-0.716078431129777,-0.30152433965726,-0.0152653988148378,-0.162490562382342,-0.432274013869315,0.543455374227716,-0.0799274326311026,-0.442636011361326,0,-0.150328882636081,0,0.104056739808186,0.109396617108752,0.303241169926234,-0.258645965736749,-0.304052279977342,0.87890093162077,0,-0.0849771246577885,-0.788130937773974,0,-0.135723143846782,-0.0164716176863073,0,-0.0775056496741894,-0.697695966512583,0.634588636592136,-0.10255873984897,-0.0256352421382743,-0.790080158389657,0,0,-0.21754314880004,0.00273486894465086,0,0.0559279193898052,0.00414099208704399,0.0963675261085263,0.0737977679077852,0.135237094603344,0,-0.645700337992725,0,0,-0.60592806381803,-0.164007090724503,-0.619783323958633,0.39704131041415,0.036430716830225,-0.108622809454255,0,0,0.104260019771316,0,-0.158478521005285,0,0.135237094603344,-0.249881296598824,-0.116628112990133,0,0.264113338826483,0,-0.092962346093212,0,0,0,0,0,0,0,0.0931454159449245,-0.354833330216448,0,-0.0733504884037417,0,0,0,0,0,0,0,0,-1.45709374421633,0.0270392050161512,-0.12301741567642,0,0,0.036430716830225,0,-0.215723402553475,0.429013633383282,0,0.00337438810571214,0,0,0,0,0.103627851553508,0,0,0,0.11910545335452,0.0151309766067859,0.0947171175057878,0.135237094603344,0,0,0.274165865228057,0,0,0,0,0.19826364062318,0,0,-0.496693078783036,0,0.14756576424064,-0.0815818795468414,0,-0.353468412396862,-0.162651631548981,-1.30962034064846,0,0,-0.023136225080848,0,0,0.0798603028599012,0.0528668716376775,0,0,0,0,0.067618547301672,0,0,0.321388154237037,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,0.295329909429089,0.0975447846842088,0,0,0,0,0,0,0,-0.0241060230789031,-0.0231630209770897,0,0,0,0,0.00123885867700635,0.0728614336604499,0,0,-0.398564506002792,0,0,0,0,0,0.224395792994432,0,0,0,0.189768841342719,0.485541410061147,0,0,-0.14212503759017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234358360716399,-0.190736881233106,0,0.0728614336604499,0,0,0,0,0,-0.201971864545641,0,0.135237094603344,0,0,1.80718550362948,0,0,0,-0.104796384789156,0,0.121469755650105,0.0728614336604499,0,0.189768841342719,0,0,0.0728614336604499,0.067618547301672,0,0,0,0.135237094603344,0,0,0,0,0,0.281787785736491,0,0,0,0,-0.61004700871208,-0.0247755787802223,0,-0.0515063925331991,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0.391166886134781,0,0,0.036430716830225,0,0,0,0,0,0,0,0,0.134506692991136,0,0,0,0.0912972506497943,0,0,0,0,0,0,0,0.0372791983352863,0,0,0.183631060279882,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.125394181036834,0,0,0,-0.054385572482455,0.321388154237037,0,-0.140103520715677,0,-0.0667773874189013,0.0728614336604499,0,0,0,0,0,0,0,0,0,0,0.036430716830225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.084887896360612,0,0,0,0,0,0,0,0,0,0,0,0.067618547301672,0,0,0,0,0,0,0.0728614336604499,0,0,0,0,0,0,0,0,0,0.067618547301672,0,0.140893892868245,0,0,0,0,0.155757478067303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135237094603344,0.109750373074081,0,0,0,-0.140224795996594,0,0,0,0,0,0,0.135237094603344,0,0.0728614336604499,0,0,0,0,0,0,0,0,0,0,0,0.135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 +
|rna_box=125
 +
|rna_catalog_number=
 +
|rna_concentration=0.21042
 +
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
 +
|rna_lot_number=43-44
 +
|rna_od260/230=1.34
 +
|rna_od260/280=1.98
 +
|rna_position=G3
 +
|rna_rin=
 +
|rna_sample_type=total RNA
 +
|rna_tube_id=125G3
 +
|rna_weight_ug=2.1042
 +
|sample_age=23
 +
|sample_category=primary cells
 +
|sample_cell_catalog=
 +
|sample_cell_line=
 +
|sample_cell_lot=
 +
|sample_cell_type=monocyte
 +
|sample_collaboration=Michael Rehli (University of Regensberg)
 +
|sample_company=
 +
|sample_description=
 +
|sample_dev_stage=
 +
|sample_disease=
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=
 +
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.5040810684334e-212!GO:0043227;membrane-bound organelle;5.76306146730688e-167!GO:0043231;intracellular membrane-bound organelle;1.10805624600814e-166!GO:0043226;organelle;6.63355143975475e-155!GO:0043229;intracellular organelle;3.56795333382342e-154!GO:0005737;cytoplasm;1.80532029842268e-148!GO:0044444;cytoplasmic part;2.10468769823385e-106!GO:0044422;organelle part;7.90893262944666e-102!GO:0044446;intracellular organelle part;3.71590733542289e-100!GO:0032991;macromolecular complex;4.44198842119702e-88!GO:0044237;cellular metabolic process;1.03292539860553e-86!GO:0044238;primary metabolic process;1.397192861639e-82!GO:0043170;macromolecule metabolic process;1.7563974245542e-80!GO:0030529;ribonucleoprotein complex;1.13590171582799e-79!GO:0003723;RNA binding;6.42035318114269e-71!GO:0005634;nucleus;1.50001261789208e-68!GO:0044428;nuclear part;4.76358112558126e-63!GO:0005739;mitochondrion;3.24288943443326e-60!GO:0043233;organelle lumen;7.2028155863099e-59!GO:0031974;membrane-enclosed lumen;7.2028155863099e-59!GO:0006412;translation;2.79909956248463e-54!GO:0019538;protein metabolic process;1.14841613816642e-48!GO:0005515;protein binding;1.88226909793667e-48!GO:0033036;macromolecule localization;4.68541433815374e-47!GO:0044267;cellular protein metabolic process;1.98066794635655e-46!GO:0044260;cellular macromolecule metabolic process;2.43267561138654e-46!GO:0015031;protein transport;6.56829960510151e-46!GO:0006396;RNA processing;1.68487062706908e-45!GO:0010467;gene expression;2.52677323856586e-45!GO:0043283;biopolymer metabolic process;2.5951338660886e-45!GO:0005840;ribosome;3.60312905950325e-45!GO:0045184;establishment of protein localization;3.60312905950325e-45!GO:0008104;protein localization;9.34281216410183e-44!GO:0043234;protein complex;1.75267560536529e-43!GO:0009059;macromolecule biosynthetic process;1.26636152592078e-41!GO:0044429;mitochondrial part;1.15256977036675e-40!GO:0003735;structural constituent of ribosome;9.01202124655389e-40!GO:0016071;mRNA metabolic process;2.34041230863921e-39!GO:0031090;organelle membrane;5.10891596946579e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.22800499035242e-38!GO:0031981;nuclear lumen;1.42650477192055e-38!GO:0005829;cytosol;1.42650477192055e-38!GO:0044249;cellular biosynthetic process;1.31940643167547e-37!GO:0009058;biosynthetic process;1.53936870069056e-36!GO:0033279;ribosomal subunit;3.62478978994922e-36!GO:0008380;RNA splicing;6.32979132850962e-36!GO:0031967;organelle envelope;6.77490082016854e-36!GO:0031975;envelope;1.44013432828131e-35!GO:0006397;mRNA processing;2.71097022120539e-34!GO:0006886;intracellular protein transport;2.69538819528426e-29!GO:0046907;intracellular transport;1.14888584511742e-28!GO:0016043;cellular component organization and biogenesis;1.20453907202907e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.51765758388686e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.05799723258104e-28!GO:0005681;spliceosome;3.49805742837026e-27!GO:0065003;macromolecular complex assembly;1.04959674363837e-26!GO:0005740;mitochondrial envelope;3.08388679133492e-26!GO:0005654;nucleoplasm;4.10173798534199e-26!GO:0003676;nucleic acid binding;1.31319238894179e-25!GO:0031966;mitochondrial membrane;3.87250074447157e-25!GO:0019866;organelle inner membrane;2.17611361665144e-24!GO:0044445;cytosolic part;7.29047651749618e-24!GO:0006119;oxidative phosphorylation;2.89421389932796e-23!GO:0005743;mitochondrial inner membrane;3.37240458989164e-22!GO:0000166;nucleotide binding;5.30321600838769e-22!GO:0022607;cellular component assembly;5.65270605329741e-22!GO:0051649;establishment of cellular localization;1.99195654030384e-21!GO:0044451;nucleoplasm part;7.48915429422521e-21!GO:0051641;cellular localization;7.86446812393283e-21!GO:0006259;DNA metabolic process;1.06980221927712e-20!GO:0022618;protein-RNA complex assembly;2.18248688185993e-20!GO:0006996;organelle organization and biogenesis;2.40886853715606e-20!GO:0044455;mitochondrial membrane part;4.1823590399643e-20!GO:0006915;apoptosis;1.24205876524401e-19!GO:0012501;programmed cell death;1.51755602558443e-19!GO:0016070;RNA metabolic process;3.15933794927307e-19!GO:0006512;ubiquitin cycle;4.63263080303196e-19!GO:0015935;small ribosomal subunit;5.4233206002997e-19!GO:0015934;large ribosomal subunit;4.02976196483931e-18!GO:0008219;cell death;8.08038104499808e-18!GO:0016265;death;8.08038104499808e-18!GO:0044265;cellular macromolecule catabolic process;1.79363264227486e-17!GO:0031980;mitochondrial lumen;3.36791213834108e-17!GO:0005759;mitochondrial matrix;3.36791213834108e-17!GO:0016874;ligase activity;3.36791213834108e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.88236530402543e-17!GO:0016462;pyrophosphatase activity;9.44167671608096e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;9.94615617788383e-17!GO:0017111;nucleoside-triphosphatase activity;1.4443839033268e-16!GO:0005746;mitochondrial respiratory chain;1.88832392764312e-16!GO:0043412;biopolymer modification;3.79183777024765e-16!GO:0008134;transcription factor binding;4.40238070475154e-16!GO:0000502;proteasome complex (sensu Eukaryota);7.76998235852751e-16!GO:0032553;ribonucleotide binding;1.11695543877106e-15!GO:0032555;purine ribonucleotide binding;1.11695543877106e-15!GO:0044248;cellular catabolic process;1.19376664229003e-15!GO:0017076;purine nucleotide binding;1.26067280919171e-15!GO:0008135;translation factor activity, nucleic acid binding;1.75996019165606e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.87639100403911e-15!GO:0006605;protein targeting;3.34044130368948e-15!GO:0051186;cofactor metabolic process;4.26592907995741e-15!GO:0019941;modification-dependent protein catabolic process;5.07779997097322e-15!GO:0043632;modification-dependent macromolecule catabolic process;5.07779997097322e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;5.37110536794407e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.05541143990789e-15!GO:0003954;NADH dehydrogenase activity;6.05541143990789e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.05541143990789e-15!GO:0006457;protein folding;7.40544206952902e-15!GO:0016604;nuclear body;8.67443570789473e-15!GO:0044257;cellular protein catabolic process;8.96018975492582e-15!GO:0043285;biopolymer catabolic process;1.00236274761866e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.09236921359256e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.90407809816435e-14!GO:0006464;protein modification process;4.437055314831e-14!GO:0009057;macromolecule catabolic process;9.22258323418231e-14!GO:0006413;translational initiation;1.01469292133309e-13!GO:0043228;non-membrane-bound organelle;1.22355197106234e-13!GO:0043232;intracellular non-membrane-bound organelle;1.22355197106234e-13!GO:0005730;nucleolus;1.26070996559771e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.35865278974135e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.53843224136678e-13!GO:0042773;ATP synthesis coupled electron transport;1.53843224136678e-13!GO:0003743;translation initiation factor activity;3.8719815397523e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.8719815397523e-13!GO:0045271;respiratory chain complex I;3.8719815397523e-13!GO:0005747;mitochondrial respiratory chain complex I;3.8719815397523e-13!GO:0016192;vesicle-mediated transport;5.45635143442813e-13!GO:0006913;nucleocytoplasmic transport;8.02907899428797e-13!GO:0043687;post-translational protein modification;8.78349673757261e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.27854777192253e-12!GO:0006974;response to DNA damage stimulus;1.29677025833762e-12!GO:0012505;endomembrane system;1.3618382335007e-12!GO:0051169;nuclear transport;1.43769170456336e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.82078781756466e-12!GO:0000375;RNA splicing, via transesterification reactions;1.82078781756466e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.82078781756466e-12!GO:0048770;pigment granule;1.84664605121399e-12!GO:0042470;melanosome;1.84664605121399e-12!GO:0006732;coenzyme metabolic process;2.09380592473251e-12!GO:0016607;nuclear speck;2.96026301410589e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.70069566613981e-12!GO:0042981;regulation of apoptosis;4.31973393937332e-12!GO:0005524;ATP binding;5.86139203699902e-12!GO:0005761;mitochondrial ribosome;7.45719099693324e-12!GO:0000313;organellar ribosome;7.45719099693324e-12!GO:0043067;regulation of programmed cell death;7.57562507023327e-12!GO:0032559;adenyl ribonucleotide binding;9.47679446347367e-12!GO:0030554;adenyl nucleotide binding;1.29597334506506e-11!GO:0016787;hydrolase activity;1.71732493665314e-11!GO:0006446;regulation of translational initiation;1.91716635404664e-11!GO:0005773;vacuole;3.50478221054835e-11!GO:0030163;protein catabolic process;8.20048916491235e-11!GO:0005768;endosome;8.33831736496922e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;9.20466303322422e-11!GO:0042623;ATPase activity, coupled;1.41072509143672e-10!GO:0008639;small protein conjugating enzyme activity;1.54478372831396e-10!GO:0016887;ATPase activity;1.65439944744135e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.13244309989862e-10!GO:0000323;lytic vacuole;2.39443993811634e-10!GO:0005764;lysosome;2.39443993811634e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.45885699986982e-10!GO:0006323;DNA packaging;2.89139818838102e-10!GO:0009259;ribonucleotide metabolic process;2.93770929112741e-10!GO:0004842;ubiquitin-protein ligase activity;2.96400049755634e-10!GO:0003712;transcription cofactor activity;3.34512610918546e-10!GO:0005794;Golgi apparatus;3.42708826346312e-10!GO:0019787;small conjugating protein ligase activity;3.66697713968001e-10!GO:0006281;DNA repair;3.88891669017306e-10!GO:0006163;purine nucleotide metabolic process;4.00746141625261e-10!GO:0017038;protein import;4.11654837774552e-10!GO:0006164;purine nucleotide biosynthetic process;4.25101335857152e-10!GO:0051082;unfolded protein binding;4.51674615972871e-10!GO:0009152;purine ribonucleotide biosynthetic process;6.93579198118581e-10!GO:0009150;purine ribonucleotide metabolic process;7.08698250511753e-10!GO:0015078;hydrogen ion transmembrane transporter activity;7.7698919979303e-10!GO:0005635;nuclear envelope;7.90562746754749e-10!GO:0009260;ribonucleotide biosynthetic process;9.13378010806674e-10!GO:0051246;regulation of protein metabolic process;9.22973250838262e-10!GO:0051276;chromosome organization and biogenesis;9.98090190029423e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.02971706328169e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.18407641042882e-09!GO:0006793;phosphorus metabolic process;1.25457378513489e-09!GO:0006796;phosphate metabolic process;1.25457378513489e-09!GO:0048193;Golgi vesicle transport;1.28799798401949e-09!GO:0042254;ribosome biogenesis and assembly;1.74085229451536e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.07759893075959e-09!GO:0050794;regulation of cellular process;2.12280592675396e-09!GO:0044453;nuclear membrane part;3.27614733778352e-09!GO:0004386;helicase activity;3.40947360606215e-09!GO:0019829;cation-transporting ATPase activity;4.07809691734903e-09!GO:0050657;nucleic acid transport;4.79569312054229e-09!GO:0051236;establishment of RNA localization;4.79569312054229e-09!GO:0050658;RNA transport;4.79569312054229e-09!GO:0015986;ATP synthesis coupled proton transport;5.06850185928039e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.06850185928039e-09!GO:0009056;catabolic process;5.7452551962291e-09!GO:0051188;cofactor biosynthetic process;6.41357738372847e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.08340001580789e-09!GO:0008026;ATP-dependent helicase activity;7.18977648883453e-09!GO:0006403;RNA localization;7.348061447784e-09!GO:0007243;protein kinase cascade;9.18788608355591e-09!GO:0031965;nuclear membrane;1.05748986187327e-08!GO:0008565;protein transporter activity;1.2071615497442e-08!GO:0005783;endoplasmic reticulum;1.75284031839543e-08!GO:0005643;nuclear pore;2.08605070475632e-08!GO:0009055;electron carrier activity;2.33446778991551e-08!GO:0016469;proton-transporting two-sector ATPase complex;2.37397794095676e-08!GO:0009060;aerobic respiration;2.40285148731396e-08!GO:0065002;intracellular protein transport across a membrane;2.41079820789154e-08!GO:0016310;phosphorylation;2.90384921112577e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.29051769099441e-08!GO:0007049;cell cycle;3.51520749512286e-08!GO:0009719;response to endogenous stimulus;3.68295080480067e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.69989407124375e-08!GO:0016881;acid-amino acid ligase activity;3.69989407124375e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.77368286498055e-08!GO:0048523;negative regulation of cellular process;4.09763018764207e-08!GO:0006754;ATP biosynthetic process;4.54641528356484e-08!GO:0006753;nucleoside phosphate metabolic process;4.54641528356484e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.35335718534353e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.35335718534353e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.35335718534353e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.35335718534353e-08!GO:0065009;regulation of a molecular function;9.1580475309545e-08!GO:0009108;coenzyme biosynthetic process;9.1851528283854e-08!GO:0016568;chromatin modification;9.80104119240779e-08!GO:0051726;regulation of cell cycle;1.1057979686367e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.1984660528106e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.24005602704361e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.24005602704361e-07!GO:0004298;threonine endopeptidase activity;1.25232793723823e-07!GO:0006399;tRNA metabolic process;1.26105385933013e-07!GO:0051170;nuclear import;1.26105385933013e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.39673325464842e-07!GO:0051028;mRNA transport;1.46129311896682e-07!GO:0000074;regulation of progression through cell cycle;1.4924843895988e-07!GO:0007242;intracellular signaling cascade;1.50474486708089e-07!GO:0009141;nucleoside triphosphate metabolic process;1.83280769903556e-07!GO:0046034;ATP metabolic process;1.83415219774423e-07!GO:0045333;cellular respiration;1.84397658519893e-07!GO:0006606;protein import into nucleus;2.66324489127723e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.68271358070703e-07!GO:0006417;regulation of translation;3.1270366848323e-07!GO:0005694;chromosome;3.72820861493346e-07!GO:0044432;endoplasmic reticulum part;3.88900839261968e-07!GO:0046930;pore complex;4.24618757422012e-07!GO:0005770;late endosome;4.63114741817233e-07!GO:0016779;nucleotidyltransferase activity;4.71037523710007e-07!GO:0043566;structure-specific DNA binding;4.71238694451901e-07!GO:0016072;rRNA metabolic process;4.75889176863839e-07!GO:0006366;transcription from RNA polymerase II promoter;4.88124257902717e-07!GO:0009615;response to virus;5.17042317831909e-07!GO:0003713;transcription coactivator activity;6.11589398215026e-07!GO:0009117;nucleotide metabolic process;7.13341482549523e-07!GO:0019222;regulation of metabolic process;8.33322229650088e-07!GO:0006364;rRNA processing;8.36726781650693e-07!GO:0006333;chromatin assembly or disassembly;8.40714732068826e-07!GO:0045786;negative regulation of progression through cell cycle;1.04265474187056e-06!GO:0065004;protein-DNA complex assembly;1.10964066938951e-06!GO:0048519;negative regulation of biological process;1.26821390730785e-06!GO:0003697;single-stranded DNA binding;1.27061303405624e-06!GO:0043069;negative regulation of programmed cell death;1.28166145871305e-06!GO:0031324;negative regulation of cellular metabolic process;1.31616170942524e-06!GO:0043065;positive regulation of apoptosis;1.4774465434383e-06!GO:0043066;negative regulation of apoptosis;1.54833478435074e-06!GO:0006099;tricarboxylic acid cycle;1.68066135962944e-06!GO:0046356;acetyl-CoA catabolic process;1.68066135962944e-06!GO:0032446;protein modification by small protein conjugation;2.10891334369585e-06!GO:0043068;positive regulation of programmed cell death;2.2563463326711e-06!GO:0019899;enzyme binding;2.38162802324208e-06!GO:0045259;proton-transporting ATP synthase complex;2.50839632885851e-06!GO:0051187;cofactor catabolic process;2.57583177381866e-06!GO:0006084;acetyl-CoA metabolic process;2.60220433769092e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.66781728489836e-06!GO:0006752;group transfer coenzyme metabolic process;3.20145414063205e-06!GO:0050789;regulation of biological process;3.30457750505941e-06!GO:0016567;protein ubiquitination;3.39712895599691e-06!GO:0006461;protein complex assembly;3.46723562539161e-06!GO:0005525;GTP binding;4.37877145471201e-06!GO:0000245;spliceosome assembly;4.78575366016518e-06!GO:0006916;anti-apoptosis;5.40140132771257e-06!GO:0031326;regulation of cellular biosynthetic process;5.49970344322937e-06!GO:0022402;cell cycle process;5.49970344322937e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.53521854446762e-06!GO:0044427;chromosomal part;6.09957238619892e-06!GO:0007005;mitochondrion organization and biogenesis;6.39500020727497e-06!GO:0005789;endoplasmic reticulum membrane;6.54787052681517e-06!GO:0007264;small GTPase mediated signal transduction;6.69988494672407e-06!GO:0016564;transcription repressor activity;7.32343434646053e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.04155937076571e-06!GO:0004812;aminoacyl-tRNA ligase activity;8.04155937076571e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.04155937076571e-06!GO:0000151;ubiquitin ligase complex;8.04433673485146e-06!GO:0005793;ER-Golgi intermediate compartment;9.43983675926879e-06!GO:0016740;transferase activity;9.69095398280853e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.07122073225376e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.14037514301607e-05!GO:0008047;enzyme activator activity;1.17862886006349e-05!GO:0009967;positive regulation of signal transduction;1.25280572018885e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.31087141374452e-05!GO:0043038;amino acid activation;1.45836221474132e-05!GO:0006418;tRNA aminoacylation for protein translation;1.45836221474132e-05!GO:0043039;tRNA aminoacylation;1.45836221474132e-05!GO:0009109;coenzyme catabolic process;1.51562751939733e-05!GO:0006917;induction of apoptosis;1.60547215086491e-05!GO:0048475;coated membrane;1.69045738040311e-05!GO:0030117;membrane coat;1.69045738040311e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.71828626751453e-05!GO:0044440;endosomal part;1.73312871629211e-05!GO:0010008;endosome membrane;1.73312871629211e-05!GO:0030120;vesicle coat;1.88943585610554e-05!GO:0030662;coated vesicle membrane;1.88943585610554e-05!GO:0005774;vacuolar membrane;1.98808797696656e-05!GO:0003924;GTPase activity;2.14190849018917e-05!GO:0000785;chromatin;2.2104777049472e-05!GO:0012502;induction of programmed cell death;2.37851392177064e-05!GO:0031323;regulation of cellular metabolic process;2.43856156147641e-05!GO:0016563;transcription activator activity;2.49087196877415e-05!GO:0016197;endosome transport;2.73005513497713e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.76438647844272e-05!GO:0009889;regulation of biosynthetic process;2.80874746739274e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.21747145833567e-05!GO:0015399;primary active transmembrane transporter activity;3.21747145833567e-05!GO:0006613;cotranslational protein targeting to membrane;3.21747145833567e-05!GO:0016481;negative regulation of transcription;3.85428577234243e-05!GO:0003724;RNA helicase activity;3.88475992486825e-05!GO:0050790;regulation of catalytic activity;4.43857226280118e-05!GO:0008654;phospholipid biosynthetic process;4.77020205921959e-05!GO:0032561;guanyl ribonucleotide binding;4.90600584102683e-05!GO:0019001;guanyl nucleotide binding;4.90600584102683e-05!GO:0031252;leading edge;5.26304984339224e-05!GO:0009892;negative regulation of metabolic process;5.52321367078085e-05!GO:0044437;vacuolar part;6.29824573917743e-05!GO:0008632;apoptotic program;6.3232503169213e-05!GO:0006401;RNA catabolic process;7.12521967934404e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.45446795998304e-05!GO:0051168;nuclear export;9.38325292273623e-05!GO:0048522;positive regulation of cellular process;0.000104951785091589!GO:0006950;response to stress;0.000110761872764472!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000113955755505647!GO:0005762;mitochondrial large ribosomal subunit;0.00011409063413775!GO:0000315;organellar large ribosomal subunit;0.00011409063413775!GO:0009165;nucleotide biosynthetic process;0.00013507588396517!GO:0005885;Arp2/3 protein complex;0.000138253799245842!GO:0031497;chromatin assembly;0.00013888118646472!GO:0006612;protein targeting to membrane;0.000141317149051275!GO:0005765;lysosomal membrane;0.00014150800089073!GO:0008234;cysteine-type peptidase activity;0.00014977145257152!GO:0006260;DNA replication;0.000155575084137215!GO:0015992;proton transport;0.000161536468558817!GO:0006818;hydrogen transport;0.000169388572059689!GO:0007034;vacuolar transport;0.00019025616603931!GO:0006334;nucleosome assembly;0.000194890394523167!GO:0006091;generation of precursor metabolites and energy;0.000197443796562561!GO:0043021;ribonucleoprotein binding;0.000204417100380121!GO:0005667;transcription factor complex;0.000211189129649115!GO:0051336;regulation of hydrolase activity;0.000218537182225127!GO:0005798;Golgi-associated vesicle;0.000237137428025369!GO:0003729;mRNA binding;0.000241435794628036!GO:0030695;GTPase regulator activity;0.000274306724359128!GO:0031902;late endosome membrane;0.000277806474473277!GO:0005096;GTPase activator activity;0.000307052378386117!GO:0044262;cellular carbohydrate metabolic process;0.000329987135153606!GO:0006402;mRNA catabolic process;0.000371556822347661!GO:0008186;RNA-dependent ATPase activity;0.000397304393360093!GO:0005769;early endosome;0.000401475197124849!GO:0010468;regulation of gene expression;0.000441893820521853!GO:0043623;cellular protein complex assembly;0.000486486125402695!GO:0051427;hormone receptor binding;0.00051252804732994!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000567576827782848!GO:0043492;ATPase activity, coupled to movement of substances;0.000569269612024304!GO:0003714;transcription corepressor activity;0.000569484241699441!GO:0007050;cell cycle arrest;0.000589807193468714!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000603383205570368!GO:0044431;Golgi apparatus part;0.000604070688237988!GO:0004674;protein serine/threonine kinase activity;0.000648446191322656!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000669034116785644!GO:0030384;phosphoinositide metabolic process;0.000677311240564232!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00068727466604905!GO:0048518;positive regulation of biological process;0.000713231681789393!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000776472140317146!GO:0035257;nuclear hormone receptor binding;0.000947145001634088!GO:0005813;centrosome;0.0010337210002926!GO:0065007;biological regulation;0.00105052081887497!GO:0004004;ATP-dependent RNA helicase activity;0.00109202742313503!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00109202742313503!GO:0003899;DNA-directed RNA polymerase activity;0.00113314594697547!GO:0000314;organellar small ribosomal subunit;0.00114186802802015!GO:0005763;mitochondrial small ribosomal subunit;0.00114186802802015!GO:0007265;Ras protein signal transduction;0.00118240150958286!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00120217947608947!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00125526163972753!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00125526163972753!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00125526163972753!GO:0003690;double-stranded DNA binding;0.00126554965894852!GO:0046489;phosphoinositide biosynthetic process;0.00129923483076863!GO:0015980;energy derivation by oxidation of organic compounds;0.00153326807123254!GO:0016044;membrane organization and biogenesis;0.00157447232647807!GO:0043681;protein import into mitochondrion;0.00158829665681395!GO:0007041;lysosomal transport;0.00160367675183235!GO:0001726;ruffle;0.00167167156294086!GO:0006350;transcription;0.00176878794468378!GO:0031072;heat shock protein binding;0.00177380407433283!GO:0045454;cell redox homeostasis;0.00182365327602029!GO:0031982;vesicle;0.00199797607906837!GO:0046474;glycerophospholipid biosynthetic process;0.00199896650722739!GO:0016491;oxidoreductase activity;0.00206433928481212!GO:0043087;regulation of GTPase activity;0.00219064787291424!GO:0032940;secretion by cell;0.00222405619652465!GO:0019843;rRNA binding;0.0023284841297294!GO:0046483;heterocycle metabolic process;0.00235637796724792!GO:0007040;lysosome organization and biogenesis;0.00261514883857195!GO:0006650;glycerophospholipid metabolic process;0.00268361312539019!GO:0005815;microtubule organizing center;0.0027071962876074!GO:0016363;nuclear matrix;0.00272123725330962!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00275032228956637!GO:0006383;transcription from RNA polymerase III promoter;0.00277530333030957!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00293636536270548!GO:0051090;regulation of transcription factor activity;0.00306518778566065!GO:0009966;regulation of signal transduction;0.00311623500497059!GO:0009607;response to biotic stimulus;0.00315979553813363!GO:0000287;magnesium ion binding;0.0034110748425225!GO:0000278;mitotic cell cycle;0.00344109327107536!GO:0006414;translational elongation;0.00370036250656111!GO:0051540;metal cluster binding;0.00370192937205281!GO:0051536;iron-sulfur cluster binding;0.00370192937205281!GO:0033116;ER-Golgi intermediate compartment membrane;0.00414122399979987!GO:0016853;isomerase activity;0.00443413080353663!GO:0016251;general RNA polymerase II transcription factor activity;0.00448195838730115!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00450639377611503!GO:0006611;protein export from nucleus;0.0045932407436356!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00465197875595839!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00465197875595839!GO:0051539;4 iron, 4 sulfur cluster binding;0.00479108872744534!GO:0008033;tRNA processing;0.00479108872744534!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00479108872744534!GO:0033033;negative regulation of myeloid cell apoptosis;0.00479108872744534!GO:0001803;regulation of type III hypersensitivity;0.00479108872744534!GO:0032733;positive regulation of interleukin-10 production;0.00479108872744534!GO:0033025;regulation of mast cell apoptosis;0.00479108872744534!GO:0001805;positive regulation of type III hypersensitivity;0.00479108872744534!GO:0033023;mast cell homeostasis;0.00479108872744534!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.00479108872744534!GO:0033032;regulation of myeloid cell apoptosis;0.00479108872744534!GO:0001802;type III hypersensitivity;0.00479108872744534!GO:0033028;myeloid cell apoptosis;0.00479108872744534!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.00479108872744534!GO:0033026;negative regulation of mast cell apoptosis;0.00479108872744534!GO:0033024;mast cell apoptosis;0.00479108872744534!GO:0048500;signal recognition particle;0.00504828842329881!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00504828842329881!GO:0015002;heme-copper terminal oxidase activity;0.00504828842329881!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00504828842329881!GO:0004129;cytochrome-c oxidase activity;0.00504828842329881!GO:0006352;transcription initiation;0.00505592476620629!GO:0004197;cysteine-type endopeptidase activity;0.00514634190042025!GO:0006626;protein targeting to mitochondrion;0.00520248182319527!GO:0031988;membrane-bound vesicle;0.00535757874496421!GO:0005083;small GTPase regulator activity;0.00536029715466226!GO:0003725;double-stranded RNA binding;0.00536429266545882!GO:0051252;regulation of RNA metabolic process;0.0053713905406817!GO:0031410;cytoplasmic vesicle;0.00598579597934094!GO:0005684;U2-dependent spliceosome;0.00600531379826924!GO:0051789;response to protein stimulus;0.00608972224223177!GO:0006986;response to unfolded protein;0.00608972224223177!GO:0045892;negative regulation of transcription, DNA-dependent;0.00628406834273411!GO:0007033;vacuole organization and biogenesis;0.00628406834273411!GO:0006261;DNA-dependent DNA replication;0.00642256089807515!GO:0003746;translation elongation factor activity;0.00644412214909599!GO:0030693;caspase activity;0.00652788759082853!GO:0016788;hydrolase activity, acting on ester bonds;0.00712216643731899!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00718687961984498!GO:0005741;mitochondrial outer membrane;0.00722949816696188!GO:0005637;nuclear inner membrane;0.00725359234919734!GO:0006891;intra-Golgi vesicle-mediated transport;0.00725359234919734!GO:0046467;membrane lipid biosynthetic process;0.00725359234919734!GO:0004518;nuclease activity;0.00726997084013765!GO:0043281;regulation of caspase activity;0.00727283484740559!GO:0048487;beta-tubulin binding;0.00753243216264319!GO:0008270;zinc ion binding;0.00790986042612284!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0079335055721618!GO:0045047;protein targeting to ER;0.0079335055721618!GO:0000139;Golgi membrane;0.00797103560656759!GO:0043488;regulation of mRNA stability;0.00802921219741494!GO:0043487;regulation of RNA stability;0.00802921219741494!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00820943554777548!GO:0016272;prefoldin complex;0.00820943554777548!GO:0030258;lipid modification;0.00830431531868253!GO:0008312;7S RNA binding;0.00894855745942998!GO:0019318;hexose metabolic process;0.00895025467504085!GO:0030663;COPI coated vesicle membrane;0.00911669685809651!GO:0030126;COPI vesicle coat;0.00911669685809651!GO:0006914;autophagy;0.00933962892952265!GO:0051087;chaperone binding;0.00959307259225861!GO:0006310;DNA recombination;0.00967874147490528!GO:0000786;nucleosome;0.00968637866801319!GO:0032318;regulation of Ras GTPase activity;0.00979814843249731!GO:0048471;perinuclear region of cytoplasm;0.00979814843249731!GO:0005996;monosaccharide metabolic process;0.0100276872919818!GO:0016023;cytoplasmic membrane-bound vesicle;0.0100731008751847!GO:0006607;NLS-bearing substrate import into nucleus;0.0103922386878006!GO:0042613;MHC class II protein complex;0.0105133031237192!GO:0031625;ubiquitin protein ligase binding;0.0105629540238061!GO:0007006;mitochondrial membrane organization and biogenesis;0.0106065715776668!GO:0046914;transition metal ion binding;0.0106109235010509!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0110992501973335!GO:0008333;endosome to lysosome transport;0.0113400190183753!GO:0051920;peroxiredoxin activity;0.0113861725284126!GO:0051329;interphase of mitotic cell cycle;0.0115478148342822!GO:0045045;secretory pathway;0.0116200075258352!GO:0006302;double-strand break repair;0.0116787924036482!GO:0030137;COPI-coated vesicle;0.0119936970239533!GO:0000209;protein polyubiquitination;0.0120475881903247!GO:0016791;phosphoric monoester hydrolase activity;0.0122038363375946!GO:0006919;caspase activation;0.0123118734708585!GO:0008624;induction of apoptosis by extracellular signals;0.0132446528566361!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0134633110991287!GO:0006643;membrane lipid metabolic process;0.0138760787527155!GO:0051325;interphase;0.0142495375604455!GO:0045792;negative regulation of cell size;0.014299552475554!GO:0046822;regulation of nucleocytoplasmic transport;0.0144615516698063!GO:0006740;NADPH regeneration;0.0149900914708181!GO:0006098;pentose-phosphate shunt;0.0149900914708181!GO:0016584;nucleosome positioning;0.0150018789840236!GO:0030118;clathrin coat;0.0150134801559953!GO:0006405;RNA export from nucleus;0.0150629734942231!GO:0031968;organelle outer membrane;0.0150683072025598!GO:0043022;ribosome binding;0.0151492140801985!GO:0006213;pyrimidine nucleoside metabolic process;0.0151495902637418!GO:0004527;exonuclease activity;0.0155070931827501!GO:0030041;actin filament polymerization;0.0155390622628597!GO:0030867;rough endoplasmic reticulum membrane;0.0155390622628597!GO:0030027;lamellipodium;0.0155390622628597!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0156075773833248!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0156075773833248!GO:0009126;purine nucleoside monophosphate metabolic process;0.0156075773833248!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0156075773833248!GO:0030176;integral to endoplasmic reticulum membrane;0.0156086651628535!GO:0030308;negative regulation of cell growth;0.0156973366637699!GO:0006506;GPI anchor biosynthetic process;0.0158907553420929!GO:0003711;transcription elongation regulator activity;0.0158907553420929!GO:0005048;signal sequence binding;0.01589506546646!GO:0048468;cell development;0.0161887478645806!GO:0030658;transport vesicle membrane;0.0162292169280315!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0163219797747975!GO:0015631;tubulin binding;0.0163365493439482!GO:0019867;outer membrane;0.0165371778000868!GO:0030880;RNA polymerase complex;0.0165371778000868!GO:0046966;thyroid hormone receptor binding;0.0167451835650153!GO:0016859;cis-trans isomerase activity;0.0167451835650153!GO:0008637;apoptotic mitochondrial changes;0.0169984778298774!GO:0000118;histone deacetylase complex;0.0173706335810893!GO:0008180;signalosome;0.0173977943896647!GO:0009161;ribonucleoside monophosphate metabolic process;0.0182359649396585!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0182359649396585!GO:0006289;nucleotide-excision repair;0.0182727295313309!GO:0048002;antigen processing and presentation of peptide antigen;0.0182727295313309!GO:0004722;protein serine/threonine phosphatase activity;0.0182873700267087!GO:0032763;regulation of mast cell cytokine production;0.0182899512084467!GO:0032762;mast cell cytokine production;0.0182899512084467!GO:0005869;dynactin complex;0.0183282334944101!GO:0046519;sphingoid metabolic process;0.0183515082756756!GO:0006595;polyamine metabolic process;0.0187188539540001!GO:0043280;positive regulation of caspase activity;0.0187807360910898!GO:0005669;transcription factor TFIID complex;0.0194412266196772!GO:0006497;protein amino acid lipidation;0.0195806396858499!GO:0009116;nucleoside metabolic process;0.0195806396858499!GO:0004177;aminopeptidase activity;0.0196318126044257!GO:0009112;nucleobase metabolic process;0.0197674928542098!GO:0044452;nucleolar part;0.0204321667098628!GO:0004185;serine carboxypeptidase activity;0.0206670224504563!GO:0006509;membrane protein ectodomain proteolysis;0.0207437265989076!GO:0033619;membrane protein proteolysis;0.0207437265989076!GO:0045926;negative regulation of growth;0.0209558814821694!GO:0006376;mRNA splice site selection;0.0210928443161662!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0210928443161662!GO:0019864;IgG binding;0.0216115266689061!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0216115266689061!GO:0010257;NADH dehydrogenase complex assembly;0.0216115266689061!GO:0033108;mitochondrial respiratory chain complex assembly;0.0216115266689061!GO:0006505;GPI anchor metabolic process;0.0218607419620058!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0219224259342617!GO:0004218;cathepsin S activity;0.021960747334366!GO:0022406;membrane docking;0.0223651207262596!GO:0048278;vesicle docking;0.0223651207262596!GO:0001816;cytokine production;0.0223651207262596!GO:0009893;positive regulation of metabolic process;0.0224800353678693!GO:0008017;microtubule binding;0.0226982037885448!GO:0003988;acetyl-CoA C-acyltransferase activity;0.022933610668928!GO:0005975;carbohydrate metabolic process;0.0229479650090532!GO:0006672;ceramide metabolic process;0.0240134723354395!GO:0006904;vesicle docking during exocytosis;0.0244354553670866!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0244540082567209!GO:0045947;negative regulation of translational initiation;0.0244540082567209!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0246903789103373!GO:0006007;glucose catabolic process;0.0252589239317217!GO:0015923;mannosidase activity;0.0253276222441187!GO:0019883;antigen processing and presentation of endogenous antigen;0.0253664541475747!GO:0031647;regulation of protein stability;0.0255685087109665!GO:0006733;oxidoreduction coenzyme metabolic process;0.0260387404434352!GO:0051098;regulation of binding;0.026263519849302!GO:0043433;negative regulation of transcription factor activity;0.0264536296402981!GO:0006839;mitochondrial transport;0.0270203567320094!GO:0006778;porphyrin metabolic process;0.027304230717973!GO:0033013;tetrapyrrole metabolic process;0.027304230717973!GO:0006897;endocytosis;0.0274417947202184!GO:0010324;membrane invagination;0.0274417947202184!GO:0008320;protein transmembrane transporter activity;0.0276040686803903!GO:0030518;steroid hormone receptor signaling pathway;0.0277946053877785!GO:0000726;non-recombinational repair;0.0277946053877785!GO:0005099;Ras GTPase activator activity;0.0278211217989531!GO:0051092;activation of NF-kappaB transcription factor;0.0283003287974841!GO:0015036;disulfide oxidoreductase activity;0.028605576929677!GO:0008287;protein serine/threonine phosphatase complex;0.0286878789346805!GO:0050811;GABA receptor binding;0.0288094969886333!GO:0019783;small conjugating protein-specific protease activity;0.0288399458281704!GO:0008538;proteasome activator activity;0.0291754460010104!GO:0006644;phospholipid metabolic process;0.0296130915081554!GO:0000049;tRNA binding;0.0298988441127472!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0298988441127472!GO:0000428;DNA-directed RNA polymerase complex;0.0298988441127472!GO:0000303;response to superoxide;0.030042529499462!GO:0022415;viral reproductive process;0.0305382290334299!GO:0008656;caspase activator activity;0.0305382290334299!GO:0005832;chaperonin-containing T-complex;0.0307848259358915!GO:0030660;Golgi-associated vesicle membrane;0.0316670910449308!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0319209316559311!GO:0007021;tubulin folding;0.0325980517838384!GO:0008139;nuclear localization sequence binding;0.0326264389500523!GO:0035258;steroid hormone receptor binding;0.0326606828432491!GO:0033367;protein localization in mast cell secretory granule;0.0329258522485141!GO:0033365;protein localization in organelle;0.0329258522485141!GO:0033371;T cell secretory granule organization and biogenesis;0.0329258522485141!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0329258522485141!GO:0033375;protease localization in T cell secretory granule;0.0329258522485141!GO:0042629;mast cell granule;0.0329258522485141!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0329258522485141!GO:0033364;mast cell secretory granule organization and biogenesis;0.0329258522485141!GO:0033380;granzyme B localization in T cell secretory granule;0.0329258522485141!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0329258522485141!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0329258522485141!GO:0033368;protease localization in mast cell secretory granule;0.0329258522485141!GO:0033366;protein localization in secretory granule;0.0329258522485141!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0329258522485141!GO:0033374;protein localization in T cell secretory granule;0.0329258522485141!GO:0015630;microtubule cytoskeleton;0.0329258522485141!GO:0008629;induction of apoptosis by intracellular signals;0.0329604000406246!GO:0030036;actin cytoskeleton organization and biogenesis;0.0331655564144436!GO:0032774;RNA biosynthetic process;0.0331873796791478!GO:0030218;erythrocyte differentiation;0.0332412796979054!GO:0006458;'de novo' protein folding;0.0335101923201872!GO:0051084;'de novo' posttranslational protein folding;0.0335101923201872!GO:0018193;peptidyl-amino acid modification;0.0335421048657687!GO:0004843;ubiquitin-specific protease activity;0.0343926763744852!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0348033750715154!GO:0060090;molecular adaptor activity;0.0348033750715154!GO:0016311;dephosphorylation;0.0352469334454266!GO:0042158;lipoprotein biosynthetic process;0.0352469334454266!GO:0016301;kinase activity;0.0353603735782708!GO:0045449;regulation of transcription;0.0353680853903849!GO:0032760;positive regulation of tumor necrosis factor production;0.0354820919417389!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0355201267554262!GO:0009119;ribonucleoside metabolic process;0.0357154571777419!GO:0004532;exoribonuclease activity;0.0358913411186916!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0358913411186916!GO:0030145;manganese ion binding;0.0362801332275784!GO:0032640;tumor necrosis factor production;0.0363309967120701!GO:0006351;transcription, DNA-dependent;0.0364410560305952!GO:0030503;regulation of cell redox homeostasis;0.0365550093794992!GO:0006013;mannose metabolic process;0.0366528041145616!GO:0006516;glycoprotein catabolic process;0.036733446687213!GO:0022884;macromolecule transmembrane transporter activity;0.0376549372131233!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0376549372131233!GO:0046983;protein dimerization activity;0.0382083565185973!GO:0000305;response to oxygen radical;0.0383931083985369!GO:0045309;protein phosphorylated amino acid binding;0.0384025213549852!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0394727484717272!GO:0050662;coenzyme binding;0.0398121871709802!GO:0051235;maintenance of localization;0.04068711273388!GO:0051287;NAD binding;0.04114127535816!GO:0042168;heme metabolic process;0.0411738381395022!GO:0000082;G1/S transition of mitotic cell cycle;0.0411738381395022!GO:0000776;kinetochore;0.0411738381395022!GO:0017091;AU-rich element binding;0.0411738381395022!GO:0050779;RNA destabilization;0.0411738381395022!GO:0000289;poly(A) tail shortening;0.0411738381395022!GO:0030833;regulation of actin filament polymerization;0.0416531022677198!GO:0000339;RNA cap binding;0.0425487765741612!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.042646399953368!GO:0043621;protein self-association;0.0426821157472718!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0427492763392363!GO:0002819;regulation of adaptive immune response;0.0427492763392363!GO:0030119;AP-type membrane coat adaptor complex;0.0431513193863205!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0435593079159127!GO:0051101;regulation of DNA binding;0.0435832603239367!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0437423579382668!GO:0047485;protein N-terminus binding;0.0441018646758899!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0442078071830217!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0443488199365551!GO:0004576;oligosaccharyl transferase activity;0.0446427858965131!GO:0002757;immune response-activating signal transduction;0.0447116028345606!GO:0005657;replication fork;0.0448169779007549!GO:0000119;mediator complex;0.0449241436170485!GO:0019752;carboxylic acid metabolic process;0.0456598322482777!GO:0042802;identical protein binding;0.0462008764311311!GO:0043300;regulation of leukocyte degranulation;0.0462008764311311!GO:0004659;prenyltransferase activity;0.0463575148523303!GO:0000096;sulfur amino acid metabolic process;0.0468900950337606!GO:0008168;methyltransferase activity;0.0470248509166412!GO:0030132;clathrin coat of coated pit;0.0470248509166412!GO:0006118;electron transport;0.0472532140453806!GO:0031901;early endosome membrane;0.0473687763300151!GO:0051223;regulation of protein transport;0.0473806031394251!GO:0001784;phosphotyrosine binding;0.0476243457176812!GO:0016605;PML body;0.048226144869695!GO:0051219;phosphoprotein binding;0.0490838332198028!GO:0000178;exosome (RNase complex);0.0491677808669804
 +
|sample_id=11911
 +
|sample_note=
 +
|sample_sex=male
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=blood
 +
|top_motifs=HMX1:2.17358459849;SPI1:2.16959058435;NANOG{mouse}:2.08612122065;IRF1,2:2.03124168708;SPIB:1.98598218255;IRF7:1.72297356184;DMAP1_NCOR{1,2}_SMARC:1.62047714669;NFIL3:1.58472095762;RFX2..5_RFXANK_RFXAP:1.537588976;ETS1,2:1.5356601693;FOXN1:1.52455313459;TLX2:1.43432368088;FOX{I1,J2}:1.42428410685;ATF5_CREB3:1.40814981476;HES1:1.37645918115;ELF1,2,4:1.34068240508;ALX1:1.27487489034;TGIF1:1.27233419514;FOX{F1,F2,J1}:1.26235639884;CREB1:1.17136593201;SREBF1,2:1.1410315722;RUNX1..3:1.08669702394;FOXO1,3,4:1.02387223826;PAX2:0.994161791481;FOXA2:0.981337230708;GLI1..3:0.874317416334;MAFB:0.854782333563;ATF4:0.781962075617;TAL1_TCF{3,4,12}:0.742842854628;ESRRA:0.686313295703;NFKB1_REL_RELA:0.66411675413;FOX{D1,D2}:0.625162673142;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.623192401262;PAX8:0.597509899134;NR6A1:0.592943807411;CRX:0.526723642902;CDX1,2,4:0.514748898301;NR5A1,2:0.499547755828;EP300:0.4771646195;ELK1,4_GABP{A,B1}:0.476547105608;ATF2:0.457012373906;FOXP3:0.452998333662;BPTF:0.411619621085;HMGA1,2:0.401300571289;POU5F1:0.363980560366;PAX4:0.305808075175;FOXP1:0.305389360452;HIF1A:0.29497643267;RFX1:0.288241035403;HLF:0.287247237851;ALX4:0.276822861847;TOPORS:0.274131306204;CEBPA,B_DDIT3:0.262348998314;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.26061242531;NKX2-2,8:0.249472402739;JUN:0.23950486;NR1H4:0.208070896543;TFCP2:0.171708641091;FOXQ1:0.149514602226;ZBTB16:0.125093358267;ESR1:0.121291468053;HBP1_HMGB_SSRP1_UBTF:0.111665083255;PAX3,7:0.100165582616;FOSL2:0.0911431008124;ZNF148:0.0625633386228;EN1,2:0.0588187855357;HNF4A_NR2F1,2:0.0573132637169;NFIX:0.0533271611094;HOXA9_MEIS1:0.033903932754;MEF2{A,B,C,D}:0.030259295349;IKZF2:-0.00306040459385;TFAP4:-0.00927814591902;GATA6:-0.0142362413404;ATF6:-0.014480724345;NANOG:-0.0289221116117;OCT4_SOX2{dimer}:-0.0338920802384;EBF1:-0.0470009088671;PITX1..3:-0.0476884597469;RBPJ:-0.0589485531141;PDX1:-0.0622072526527;T:-0.0809019700316;RXRA_VDR{dimer}:-0.0946483427626;PBX1:-0.10205971528;PPARG:-0.105092891138;BACH2:-0.11439608932;POU2F1..3:-0.131106811687;FOS_FOS{B,L1}_JUN{B,D}:-0.144840882562;RORA:-0.150165792222;PRRX1,2:-0.208460143261;NFE2L2:-0.220781782862;STAT2,4,6:-0.223455990472;NFE2:-0.240505438153;AHR_ARNT_ARNT2:-0.250606190845;VSX1,2:-0.270127262888;GATA4:-0.275630341022;CUX2:-0.335457034629;MYB:-0.358019764021;SPZ1:-0.363667438146;HOX{A5,B5}:-0.36544468556;NHLH1,2:-0.378535104883;AIRE:-0.380198307662;FOXD3:-0.382220372973;SOX2:-0.393920141134;DBP:-0.396608869926;MYFfamily:-0.406436628826;ARID5B:-0.417663713776;AR:-0.421878145474;NFE2L1:-0.425969903251;POU1F1:-0.430343640689;HSF1,2:-0.441611511876;REST:-0.456897425689;GZF1:-0.471724652434;PAX1,9:-0.492373975031;SRF:-0.492729106674;MYOD1:-0.523705663941;HNF1A:-0.548555966804;HOX{A4,D4}:-0.562778364434;NKX2-3_NKX2-5:-0.576181419476;HOX{A6,A7,B6,B7}:-0.579489452908;SOX{8,9,10}:-0.584313062179;ADNP_IRX_SIX_ZHX:-0.616939498526;YY1:-0.644294015842;SOX5:-0.644308652012;BREu{core}:-0.652573014764;NFY{A,B,C}:-0.668594773581;PRDM1:-0.683531076466;STAT1,3:-0.716003182496;ZEB1:-0.721672104447;MTF1:-0.725290092274;FOXL1:-0.726020708265;ONECUT1,2:-0.772201501461;E2F1..5:-0.796118625588;NKX6-1,2:-0.80527941236;TFAP2{A,C}:-0.81209885558;LEF1_TCF7_TCF7L1,2:-0.851116329375;HAND1,2:-0.859040488445;NKX3-2:-0.892184588933;ZFP161:-0.930545180501;STAT5{A,B}:-0.935348971353;XBP1:-0.948919569282;RXR{A,B,G}:-0.970214739339;KLF4:-0.975784304132;SNAI1..3:-0.979496053413;NRF1:-0.992135148099;IKZF1:-1.04488759719;ZNF238:-1.06381755311;PAX5:-1.06886554073;LHX3,4:-1.07858992884;TP53:-1.07917670349;NKX3-1:-1.09925812321;TFAP2B:-1.10780472248;SMAD1..7,9:-1.11969387493;SP1:-1.13108256961;EGR1..3:-1.14338863887;MTE{core}:-1.14714192689;GFI1:-1.18034094628;TEF:-1.18562508092;PATZ1:-1.2033066402;GCM1,2:-1.22906200528;MZF1:-1.23632820274;MED-1{core}:-1.23702782726;PAX6:-1.24063091803;TBP:-1.24715847527;LMO2:-1.24763685657;ZNF423:-1.24983269535;GFI1B:-1.2595882729;ZIC1..3:-1.26254427512;MYBL2:-1.29675410988;TLX1..3_NFIC{dimer}:-1.30800566571;RREB1:-1.321984206;ZNF143:-1.32711101584;POU6F1:-1.33988153085;ZBTB6:-1.36484827666;TFDP1:-1.36629089407;HIC1:-1.39838671061;GTF2I:-1.39861830029;CDC5L:-1.39980562472;UFEwm:-1.45007689495;NKX2-1,4:-1.46273545419;NFATC1..3:-1.48968947668;EVI1:-1.49292331429;TEAD1:-1.52985165404;XCPE1{core}:-1.57140626629;MAZ:-1.57170027642;ZNF384:-1.61881984146;FOXM1:-1.64144279352;bHLH_family:-1.66409599212;NR3C1:-1.66706466589;GTF2A1,2:-1.83003327817;SOX17:-1.93983251086;TBX4,5:-1.95201806425;POU3F1..4:-2.28631157079
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11911-125G3;search_select_hide=table117:FF:11911-125G3
 
}}
 
}}

Latest revision as of 09:28, 4 June 2020

Name:CD14-CD16+ Monocytes, donor3
Species:Human (Homo sapiens)
Library ID:CNhs13548
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typemonocyte
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number43-44
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005535
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13548 CAGE DRX008169 DRR009041
Accession ID Hg19

Library idBAMCTSS
CNhs13548 DRZ000466 DRZ001851
Accession ID Hg38

Library idBAMCTSS
CNhs13548 DRZ011816 DRZ013201
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.102
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0729
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma--0.296
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.135
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.135
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0729
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.391
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.163
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.14
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.442
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.238
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.249
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.551
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.135
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0912
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.112
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.135
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.111
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus--0.387
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.864
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.613
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.358
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.557
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.473
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0729
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.68
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0729
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0797
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.419
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.634
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.421
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.504
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.122
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0288
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.302
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.063
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.238
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.513
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.135
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.19
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole1.006
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13548

Jaspar motif P-value
MA0002.2 4.23902e-7
MA0003.1 0.0567
MA0004.1 0.497
MA0006.1 0.998
MA0007.1 0.98
MA0009.1 0.356
MA0014.1 0.426
MA0017.1 0.00446
MA0018.2 0.0493
MA0019.1 0.658
MA0024.1 0.0154
MA0025.1 0.0381
MA0027.1 0.727
MA0028.1 0.174
MA0029.1 0.296
MA0030.1 0.243
MA0031.1 0.375
MA0035.2 0.878
MA0038.1 0.209
MA0039.2 0.396
MA0040.1 0.365
MA0041.1 0.418
MA0042.1 0.307
MA0043.1 0.00523
MA0046.1 0.0521
MA0047.2 0.07
MA0048.1 0.841
MA0050.1 1.11814e-14
MA0051.1 1.75684e-6
MA0052.1 0.631
MA0055.1 0.932
MA0057.1 0.868
MA0058.1 0.333
MA0059.1 0.562
MA0060.1 3.45415e-4
MA0061.1 0.00371
MA0062.2 3.47867e-6
MA0065.2 0.0132
MA0066.1 0.225
MA0067.1 0.00276
MA0068.1 0.397
MA0069.1 0.884
MA0070.1 0.00509
MA0071.1 0.0848
MA0072.1 0.59
MA0073.1 0.54
MA0074.1 0.516
MA0076.1 0.104
MA0077.1 0.113
MA0078.1 0.88
MA0079.2 0.566
MA0080.2 3.82099e-16
MA0081.1 4.35811e-5
MA0083.1 0.452
MA0084.1 0.578
MA0087.1 0.363
MA0088.1 0.504
MA0090.1 0.0123
MA0091.1 0.437
MA0092.1 0.485
MA0093.1 0.566
MA0099.2 0.149
MA0100.1 0.973
MA0101.1 0.026
MA0102.2 2.13299e-4
MA0103.1 0.36
MA0104.2 0.414
MA0105.1 1.03579e-5
MA0106.1 0.61
MA0107.1 0.0119
MA0108.2 9.93058e-9
MA0111.1 0.289
MA0112.2 6.71577e-4
MA0113.1 0.909
MA0114.1 0.0514
MA0115.1 0.303
MA0116.1 2.17121e-5
MA0117.1 0.43
MA0119.1 0.292
MA0122.1 0.71
MA0124.1 0.229
MA0125.1 0.358
MA0131.1 0.529
MA0135.1 0.904
MA0136.1 8.3775e-20
MA0137.2 0.55
MA0138.2 0.56
MA0139.1 0.825
MA0140.1 0.872
MA0141.1 0.0196
MA0142.1 0.499
MA0143.1 0.82
MA0144.1 0.798
MA0145.1 0.232
MA0146.1 0.0382
MA0147.1 0.45
MA0148.1 0.525
MA0149.1 0.0603
MA0150.1 0.0427
MA0152.1 0.0628
MA0153.1 0.0127
MA0154.1 0.00203
MA0155.1 0.959
MA0156.1 3.66697e-12
MA0157.1 0.173
MA0159.1 0.0637
MA0160.1 0.00984
MA0162.1 0.698
MA0163.1 2.11583e-12
MA0164.1 0.93
MA0258.1 0.0103
MA0259.1 0.81



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13548

Novel motif P-value
1 0.0869
10 0.0254
100 0.787
101 0.323
102 0.452
103 0.312
104 0.567
105 0.351
106 0.0194
107 0.815
108 0.861
109 0.0306
11 0.157
110 0.231
111 0.0324
112 0.233
113 0.387
114 0.00666
115 0.336
116 0.946
117 0.0192
118 0.123
119 0.275
12 0.296
120 0.859
121 0.963
122 0.56
123 2.30124e-4
124 0.349
125 0.0575
126 0.158
127 0.351
128 0.0977
129 0.982
13 0.125
130 0.275
131 0.878
132 0.0416
133 0.164
134 0.716
135 0.12
136 0.744
137 1.07535e-4
138 0.281
139 0.0129
14 0.393
140 0.212
141 0.513
142 0.934
143 0.158
144 0.979
145 0.287
146 0.994
147 0.428
148 0.0576
149 0.73
15 0.135
150 0.525
151 0.259
152 0.343
153 0.609
154 0.783
155 0.0743
156 0.861
157 0.738
158 0.151
159 0.223
16 0.482
160 0.5
161 0.575
162 0.647
163 0.265
164 0.113
165 0.126
166 0.477
167 0.048
168 0.554
169 0.0142
17 0.367
18 0.215
19 0.289
2 0.955
20 0.454
21 0.419
22 0.301
23 0.327
24 0.301
25 0.1
26 0.0656
27 0.55
28 0.478
29 0.08
3 0.0837
30 0.347
31 0.604
32 0.618
33 0.176
34 0.593
35 0.159
36 0.027
37 0.0547
38 0.471
39 0.737
4 0.918
40 0.146
41 0.0697
42 0.275
43 0.0869
44 0.617
45 0.943
46 0.139
47 0.331
48 0.353
49 0.0867
5 0.108
50 0.952
51 0.406
52 0.335
53 0.262
54 0.432
55 0.305
56 0.792
57 0.761
58 0.0289
59 0.148
6 0.782
60 0.0453
61 0.233
62 0.00807
63 0.513
64 0.343
65 0.37
66 0.367
67 0.249
68 0.825
69 0.608
7 0.136
70 0.0207
71 0.0456
72 0.244
73 0.137
74 0.385
75 0.032
76 0.214
77 0.628
78 0.27
79 0.267
8 0.282
80 0.315
81 0.182
82 0.146
83 0.746
84 0.696
85 0.0549
86 0.087
87 0.201
88 0.515
89 0.751
9 0.338
90 0.0542
91 0.46
92 0.482
93 0.444
94 0.0209
95 0.0637
96 0.281
97 0.982
98 0.104
99 0.0737



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs13548


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000875 (non-classical monocyte)
0002396 (CD14-low, CD16-positive monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011100 (human CD14-CD16-positive Monocytes sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)