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{{f5samples
 
{{f5samples
 +
|DRA_sample_Accession=CAGE@SAMD00005191
 +
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005191
 +
|accession_numbers=CAGE;DRX008384;DRR009256;DRZ000681;DRZ002066;DRZ012031;DRZ013416
 +
|accession_numbers_RNASeq=RNA-Seq;DRX057151;DRR062910;DRZ007986
 
|ancestors_in_anatomy_facet=
 
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000197,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000710,CL:0000255,CL:0002077,CL:0000098,CL:0002167
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0200002
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score=
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
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|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg38.nobarcode.ctss.bed.gz
 
|id=FF:11933-125I7
 
|id=FF:11933-125I7
 
|is_a=FF:0000002;;FF:0000210;;FF:0200002
 
|is_a=FF:0000002;;FF:0000210;;FF:0200002
 +
|is_obsolete=
 +
|library_id=CNhs13816
 +
|library_id_phase_based=2:CNhs13816
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11933
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11933
 
|name=Olfactory epithelial cells, donor1
 
|name=Olfactory epithelial cells, donor1
 
|namespace=
 
|namespace=
Line 44: Line 65:
 
|profile_rnaseq=
 
|profile_rnaseq=
 
|profile_srnaseq=
 
|profile_srnaseq=
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.265178186717961,0,0.0322370177610921,-0.0462791848189842,0,0,0,0,0,0,0,0,0,0,0,0.762177960216572,0,0.415303551029283,0,0,0,0,0,-0.0159014378347718,0,0,0.176642560175744,0,0,0,0,0,0,0,0,0,0,0.0820564584332857,0,0.0204018145685557,0,0.0820564584332857,0,0,0,0,0,0,0.081066302592536,0,0,0,0.0820564584332857,0,0.0737141707818466,0.0820564584332857,0.113570286168136,0,0,0.212255522741509,0.0820564584332857,0,0,0,0,0,0,0,0.309599149954606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00980826376777622,0.0802439202187695,0.0410282292166428,0,0.00299140151994459,-0.0714021541369715,0.0740856404933666,0.0755226895746175,0.69473207941014,0,0.0820564584332857,-0.0159788928044207,0.0374040640775607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.0820564584332857,0,0,-0.000316934599061042,-0.0914010741557194,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,-0.0159788928044207,0,0.0820564584332857,0,0,0,0.0820564584332857,0,0,0.69473207941014,0,0,-0.0961334961363296,0,-0.392029760318723,-0.143515142523472,0,0,0.0253682765008698,0,0.151045379149235,0,0,0.0820564584332857,0,0.210562647410741,0,0,0.566612212457575,0,0.10063282755992,0,0,0.151045379149235,0,0.142782054646378,0.566514762698067,0,0.305521711245274,0.500282300300342,0,0,0,0,0.258327425327123,0,-0.038823025360455,0.307472124759212,0.435014028054099,0.208604500170303,-0.0325979663701281,0,0,0,-0.055243731041552,0.307407044295199,0,0,0.136664883548084,-0.0760682948552885,0,0,1.14129398733266,0,0.272805451188434,0.158661125750075,0,0.122424338992923,0,0,0,0,0,0,0,0.0820564584332857,0.309599149954606,0,0,0.828829333937398,0.309251870362182,0.083729451317995,0.0820564584332857,0.210562647410741,0.0820564584332857,-0.166321088981886,0,0,0.321445923453573,0.120560316597769,-0.0693853611869145,-0.177922347207663,0,-0.302389727009913,0.0438750205513035,-0.320242396257472,-0.0714021541369715,0.242790443711491,0.298527908395338,0.0544296483217365,0.202086391974895,-0.0399997956748748,0.0685775780338951,0.0639299218701721,0,0.102826337295367,-0.022446677322248,0,0,0,0.152833054263344,0,0.0962034011991109,0.256158118962363,-0.059042386144639,0.233568459938135,0.281900099482298,0.0388636701260947,-0.214774988354633,0.0425239299766151,0.111190108481116,0,0.60213902761923,0,0.0820564584332857,0,0.187272762048204,0.294081076961595,-0.0234726171212143,0.00901115871849555,0.308363197768471,0.142218386333373,0.0410282292166428,0.0640682817952535,0.225675356938954,0,0,0.328150616435389,0,0,0,0,0,-0.152005208803752,-0.187729613273255,0.118906968201367,0,-0.126088749488664,0.15755828137893,-0.142486505375284,0,-0.1141816750583,0.188021531471824,-0.11817763469807,0.222388837784284,0,-0.201688069572022,0.611716625128082,-0.00312599959278592,0.0661148225534475,-0.0584468268118252,0.141515059820743,-0.139754090372615,0.156650159190618,0.139811830737525,0,0.96872251234765,0,0.225505002226334,0.361207088242392,0.0457717448916803,-0.007091475654338,0.0820564584332857,0.191394863375331,0,0.0183089538129797,0,-0.16736548094293,0.306592919513601,-0.288243995431451,-0.0444834670785135,0.0273574595040831,0.161907080627851,0.633019459260446,0.0820564584332857,0,0.00149570075997229,0,-0.150367083334639,0.281251324126067,-0.0653408749425761,-0.033708132973824,0,0.169479386399911,0,0,0.232784943822213,0.333150523613322,0.151045379149235,0.0147127068681287,-0.092313443613481,0.142056792243842,-0.0339146150016484,0.0820564584332857,0,-0.0308491972545238,0,0.0820564584332857,0.106672585905911,0,0.0563133385291907,0.00957149666832718,0.0101023323213518,-0.067594580237613,0,0,-0.0264823868159408,0,0.481647118684954,0,0,-0.0131510538159117,0.015660561451586,0,0,0,0.221183710117247,0.125490291940259,0.0920888681638787,0,0,0,0,0.0306085152830523,0.443086318329725,-0.0452341802618418,0,0.264703216281751,0,0,0,0,0.151045379149235,-0.0818441490038839,0,0,0.899384690391846,0.0778264287412658,-0.12301741567642,0.0410282292166428,0,0,0,0.27278622539171,0.313652908505192,0.0820564584332857,0.0191826726516031,0,0,0,0,-0.0861409897892114,0,0,0.10528132370537,0.131448919077541,0.0243260013796217,0.171501413002105,0,0,0,0.0748081281551213,0,0,0.262897838155083,0,-0.145253919143684,0,0.11084309989025,0.648954574991392,0.0417172531530296,0.21625738834837,0.0694634996023934,0,0.275508635180357,0.504689463352299,0.42470366833613,0,0,0.00155070636519533,0,0.260080898682673,0.16746669489327,0.0543388092675544,0,0.168445294425995,0,0,0,0,0.151045379149235,0,0.211181704404591,0.154799574977303,0,0,0,0,0,0,0,0,0,0,0.0607394326619204,-0.0101675982252247,0.151045379149235,0,0,0,0,0,0,0.293923409028641,0.235050211735704,0,0,0.11655091879126,0,0,0.309599149954606,0,0,0.535070819056665,0,0,0,0,0,0.113570286168136,0,0,0,0,-0.174614828071254,0,0,0.0322370177610921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0872435613752933,-0.0240253327325988,0,0,0,0,0,0,0,0.242056172393825,0,0.0820564584332857,0,0,1.88968822265729,0,0,0,0.20480276516545,0,0.265178186717961,0,0,0.309599149954606,0,0,0,0,0,0,0,0.351762529756912,0,0,0,0,0,0,0,0.381088980108286,0,0,0.677524257552342,0.0917753400110378,0.13424938850618,0.158645997738343,0,0,0.177643572137159,0,0,0,0,0,0,0.0441822655460904,0.149683163991671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0820564584332857,0,0,0,0,0,0.0410282292166428,0.076251177004181,0,0,0,0,0,0,0,-0.0159014378347718,0,0,-0.0510045805838833,0,0,0,0,0,0,0.185350362186047,0.186412442299833,0.0247782117198231,0,0,0.151045379149235,0.158362535919718,0.0820564584332857,0,0.0477422489523833,0.0820564584332857,0.0842679917303335,0,0,0,0,0,0,0,0,0.151045379149235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415303551029283,0,0,0.0820564584332857,0,0,0,0,0,0,0,0,0.0410282292166428,0.229072388870164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0070168659412263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0410282292166428,0,0,0,0,0,0.00203799016464729,0,0,0,0.138676300099868,0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|rna_box=125
 
|rna_box=125
 
|rna_catalog_number=
 
|rna_catalog_number=
Line 56: Line 80:
 
|rna_tube_id=125I7
 
|rna_tube_id=125I7
 
|rna_weight_ug=11.232
 
|rna_weight_ug=11.232
 +
|rnaseq_library_id=RDhi10094
 
|sample_age=59
 
|sample_age=59
 +
|sample_category=primary cells
 
|sample_cell_catalog=
 
|sample_cell_catalog=
 
|sample_cell_line=
 
|sample_cell_line=
Line 69: Line 95:
 
|sample_ethnicity=caucasian
 
|sample_ethnicity=caucasian
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80037650203108e-209!GO:0005737;cytoplasm;2.09479972177068e-175!GO:0043226;organelle;3.73058939542385e-164!GO:0043229;intracellular organelle;7.14446293711242e-164!GO:0043231;intracellular membrane-bound organelle;2.02362980133874e-159!GO:0043227;membrane-bound organelle;4.16983028810536e-159!GO:0044444;cytoplasmic part;2.4021976611123e-126!GO:0044422;organelle part;3.48225816435475e-110!GO:0044446;intracellular organelle part;6.20594233692417e-109!GO:0032991;macromolecular complex;1.36577278226193e-82!GO:0044237;cellular metabolic process;1.72346930518162e-77!GO:0044238;primary metabolic process;2.0507809504989e-77!GO:0030529;ribonucleoprotein complex;4.05024085790572e-76!GO:0043170;macromolecule metabolic process;1.02761310764256e-74!GO:0005515;protein binding;1.02761310764256e-74!GO:0005739;mitochondrion;1.2232454410427e-63!GO:0043233;organelle lumen;5.63078863945862e-59!GO:0031974;membrane-enclosed lumen;5.63078863945862e-59!GO:0003723;RNA binding;1.61609273569036e-57!GO:0005634;nucleus;2.71597060984979e-55!GO:0019538;protein metabolic process;1.74253208855124e-52!GO:0044428;nuclear part;2.11556128437239e-52!GO:0005840;ribosome;2.22644305136478e-49!GO:0006412;translation;1.4202414486847e-47!GO:0044260;cellular macromolecule metabolic process;2.77348555186483e-47!GO:0044267;cellular protein metabolic process;2.60002773343266e-46!GO:0031090;organelle membrane;1.45842809403237e-44!GO:0003735;structural constituent of ribosome;6.27821378160221e-44!GO:0016043;cellular component organization and biogenesis;1.71706488210469e-43!GO:0044429;mitochondrial part;2.47976377324438e-42!GO:0043234;protein complex;3.91885313137958e-41!GO:0015031;protein transport;5.82034550071281e-41!GO:0033036;macromolecule localization;1.15159038380292e-40!GO:0033279;ribosomal subunit;6.33736632209096e-39!GO:0043283;biopolymer metabolic process;3.67909808196922e-38!GO:0045184;establishment of protein localization;4.7212032748907e-38!GO:0008104;protein localization;5.4721544870221e-38!GO:0005829;cytosol;9.73147007168331e-37!GO:0009059;macromolecule biosynthetic process;4.57085882035562e-36!GO:0009058;biosynthetic process;5.5820586408996e-36!GO:0044249;cellular biosynthetic process;8.88614360930432e-36!GO:0010467;gene expression;1.86100000257003e-35!GO:0031967;organelle envelope;5.22294282858561e-35!GO:0006396;RNA processing;7.27956036379743e-35!GO:0031975;envelope;9.10493317081876e-35!GO:0031981;nuclear lumen;4.11027448216188e-33!GO:0046907;intracellular transport;4.65538536512242e-32!GO:0016071;mRNA metabolic process;2.20242334185759e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.84218590876609e-29!GO:0008380;RNA splicing;1.50930599584732e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.59553076264753e-28!GO:0065003;macromolecular complex assembly;4.92768076989687e-28!GO:0006886;intracellular protein transport;2.47955622710126e-27!GO:0005740;mitochondrial envelope;3.62454164105814e-27!GO:0031966;mitochondrial membrane;5.2810574658368e-26!GO:0006397;mRNA processing;1.10248953869657e-25!GO:0019866;organelle inner membrane;1.56962705517483e-25!GO:0022607;cellular component assembly;2.06314398977777e-25!GO:0005743;mitochondrial inner membrane;4.26381802659649e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.83690237947141e-24!GO:0043228;non-membrane-bound organelle;5.87091555136021e-24!GO:0043232;intracellular non-membrane-bound organelle;5.87091555136021e-24!GO:0006996;organelle organization and biogenesis;7.69227519719976e-24!GO:0044445;cytosolic part;4.00256067532083e-23!GO:0006119;oxidative phosphorylation;1.4402543540374e-21!GO:0005654;nucleoplasm;2.21012761029688e-21!GO:0015935;small ribosomal subunit;2.02803467744572e-20!GO:0005681;spliceosome;4.26212011570825e-20!GO:0044455;mitochondrial membrane part;6.20152242741991e-20!GO:0015934;large ribosomal subunit;1.3904753359237e-19!GO:0000166;nucleotide binding;2.80442929199268e-19!GO:0005783;endoplasmic reticulum;2.31412573555149e-18!GO:0051649;establishment of cellular localization;2.60564153779481e-18!GO:0051641;cellular localization;2.71605451619943e-18!GO:0008134;transcription factor binding;3.6120524387424e-18!GO:0048770;pigment granule;4.55685776181325e-18!GO:0042470;melanosome;4.55685776181325e-18!GO:0044451;nucleoplasm part;8.20237556541031e-18!GO:0031980;mitochondrial lumen;9.86925103428219e-18!GO:0005759;mitochondrial matrix;9.86925103428219e-18!GO:0022618;protein-RNA complex assembly;1.03579122927568e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.77982417803697e-17!GO:0016462;pyrophosphatase activity;4.02739767832821e-17!GO:0006457;protein folding;5.28464560800989e-17!GO:0003676;nucleic acid binding;5.57383384353098e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;5.79060575769937e-17!GO:0012505;endomembrane system;7.63219304892107e-17!GO:0017111;nucleoside-triphosphatase activity;8.93640046170587e-17!GO:0006512;ubiquitin cycle;1.13687888935608e-16!GO:0016874;ligase activity;1.17579146982567e-16!GO:0005746;mitochondrial respiratory chain;1.26825699679775e-16!GO:0051186;cofactor metabolic process;1.09919937170847e-15!GO:0006259;DNA metabolic process;1.64554832290932e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.70677934431134e-15!GO:0048193;Golgi vesicle transport;1.97819098432113e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.08093509540173e-15!GO:0008135;translation factor activity, nucleic acid binding;2.12502213300785e-15!GO:0044432;endoplasmic reticulum part;3.73854984170873e-15!GO:0050136;NADH dehydrogenase (quinone) activity;8.25743945309992e-15!GO:0003954;NADH dehydrogenase activity;8.25743945309992e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.25743945309992e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.17205924635968e-14!GO:0005794;Golgi apparatus;1.58945085377862e-14!GO:0043412;biopolymer modification;1.86107299635284e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.91846898401163e-14!GO:0019941;modification-dependent protein catabolic process;1.94868309641632e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.94868309641632e-14!GO:0043285;biopolymer catabolic process;2.26075484283898e-14!GO:0044257;cellular protein catabolic process;2.9871755598628e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.33332077811166e-14!GO:0044265;cellular macromolecule catabolic process;5.5748725586558e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.16621520759342e-13!GO:0016070;RNA metabolic process;1.17155241225074e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.30931104110196e-13!GO:0032553;ribonucleotide binding;1.43784645882597e-13!GO:0032555;purine ribonucleotide binding;1.43784645882597e-13!GO:0030163;protein catabolic process;1.82799253802125e-13!GO:0017076;purine nucleotide binding;1.84393019409102e-13!GO:0005761;mitochondrial ribosome;2.66408324624559e-13!GO:0000313;organellar ribosome;2.66408324624559e-13!GO:0006605;protein targeting;3.43637343219321e-13!GO:0006464;protein modification process;5.72423771537029e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.72423771537029e-13!GO:0045271;respiratory chain complex I;5.72423771537029e-13!GO:0005747;mitochondrial respiratory chain complex I;5.72423771537029e-13!GO:0009057;macromolecule catabolic process;6.00565621016371e-13!GO:0042775;organelle ATP synthesis coupled electron transport;8.12039797752868e-13!GO:0042773;ATP synthesis coupled electron transport;8.12039797752868e-13!GO:0016192;vesicle-mediated transport;8.7902963279551e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.74362773424977e-12!GO:0005730;nucleolus;1.8024871554043e-12!GO:0003743;translation initiation factor activity;1.8843057936192e-12!GO:0006732;coenzyme metabolic process;2.66951253924557e-12!GO:0006413;translational initiation;4.17155172070569e-12!GO:0009055;electron carrier activity;4.43885992497814e-12!GO:0003712;transcription cofactor activity;1.15703501977943e-11!GO:0051082;unfolded protein binding;1.26149268762851e-11!GO:0043687;post-translational protein modification;1.97889039405817e-11!GO:0044248;cellular catabolic process;1.99434418919781e-11!GO:0048523;negative regulation of cellular process;3.47073993808374e-11!GO:0012501;programmed cell death;4.45296957623056e-11!GO:0005793;ER-Golgi intermediate compartment;5.4426387556015e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.26714667277031e-11!GO:0006915;apoptosis;1.14899052721471e-10!GO:0007049;cell cycle;1.70668522373354e-10!GO:0005524;ATP binding;2.31273060828651e-10!GO:0008639;small protein conjugating enzyme activity;2.67448790331253e-10!GO:0005789;endoplasmic reticulum membrane;2.81751700916217e-10!GO:0006366;transcription from RNA polymerase II promoter;3.29553877856572e-10!GO:0006446;regulation of translational initiation;3.53286997309507e-10!GO:0008565;protein transporter activity;3.72436652054504e-10!GO:0008219;cell death;3.72697835141728e-10!GO:0016265;death;3.72697835141728e-10!GO:0032559;adenyl ribonucleotide binding;3.93526805106549e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;4.22054642733612e-10!GO:0000375;RNA splicing, via transesterification reactions;4.22054642733612e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.22054642733612e-10!GO:0004842;ubiquitin-protein ligase activity;4.68175391300897e-10!GO:0030554;adenyl nucleotide binding;6.3792915680753e-10!GO:0019787;small conjugating protein ligase activity;6.45253407992022e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.07171359544371e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.85826637388323e-09!GO:0048519;negative regulation of biological process;2.14338157849935e-09!GO:0016604;nuclear body;2.67373323766641e-09!GO:0006913;nucleocytoplasmic transport;2.79950514809648e-09!GO:0009259;ribonucleotide metabolic process;2.99542442649376e-09!GO:0050794;regulation of cellular process;3.20835189892324e-09!GO:0051169;nuclear transport;5.6758793621334e-09!GO:0005635;nuclear envelope;6.56718981967069e-09!GO:0016881;acid-amino acid ligase activity;6.95828200426922e-09!GO:0006461;protein complex assembly;7.29658693118972e-09!GO:0006163;purine nucleotide metabolic process;8.58177687632531e-09!GO:0009150;purine ribonucleotide metabolic process;9.72956766771519e-09!GO:0031965;nuclear membrane;1.45276744458879e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.64796158009642e-08!GO:0003924;GTPase activity;1.7425993523393e-08!GO:0006974;response to DNA damage stimulus;1.94664424387683e-08!GO:0051246;regulation of protein metabolic process;2.15915978414035e-08!GO:0009260;ribonucleotide biosynthetic process;2.16257448359526e-08!GO:0006164;purine nucleotide biosynthetic process;2.45805367025361e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.65605576760127e-08!GO:0030120;vesicle coat;3.07632651360586e-08!GO:0030662;coated vesicle membrane;3.07632651360586e-08!GO:0005768;endosome;3.73253020561138e-08!GO:0009060;aerobic respiration;4.2465996115148e-08!GO:0015986;ATP synthesis coupled proton transport;4.53176105947729e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.53176105947729e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.40314266349994e-08!GO:0009141;nucleoside triphosphate metabolic process;6.31086484887369e-08!GO:0044453;nuclear membrane part;6.46837778245312e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.80570453095348e-08!GO:0009144;purine nucleoside triphosphate metabolic process;8.80570453095348e-08!GO:0048475;coated membrane;8.86606632151593e-08!GO:0030117;membrane coat;8.86606632151593e-08!GO:0045333;cellular respiration;8.88809221884007e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.91857415928626e-08!GO:0051188;cofactor biosynthetic process;1.01928311735633e-07!GO:0017038;protein import;1.14215669769542e-07!GO:0042254;ribosome biogenesis and assembly;1.16549329661666e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.23582131337153e-07!GO:0022402;cell cycle process;1.24903415655846e-07!GO:0042623;ATPase activity, coupled;1.43807533834093e-07!GO:0016607;nuclear speck;1.49890637290403e-07!GO:0016887;ATPase activity;1.51844376900398e-07!GO:0008361;regulation of cell size;1.51844376900398e-07!GO:0019829;cation-transporting ATPase activity;1.5828355038602e-07!GO:0046034;ATP metabolic process;2.00634236157902e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.18442338258111e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.18442338258111e-07!GO:0016049;cell growth;2.23230570958873e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.23570150682032e-07!GO:0043069;negative regulation of programmed cell death;2.94751154327254e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.12284909907266e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.52543728285435e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.55118987796495e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.55118987796495e-07!GO:0005788;endoplasmic reticulum lumen;3.71166256235188e-07!GO:0043066;negative regulation of apoptosis;4.03766988431157e-07!GO:0000074;regulation of progression through cell cycle;4.05159861201861e-07!GO:0006793;phosphorus metabolic process;4.21865683439519e-07!GO:0006796;phosphate metabolic process;4.21865683439519e-07!GO:0006399;tRNA metabolic process;4.41399753382663e-07!GO:0051726;regulation of cell cycle;4.42121940017404e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.6046139240413e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.6046139240413e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.6046139240413e-07!GO:0042981;regulation of apoptosis;5.53266344647735e-07!GO:0043067;regulation of programmed cell death;6.07430446354847e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;6.11041344861019e-07!GO:0006754;ATP biosynthetic process;6.57708218533504e-07!GO:0006753;nucleoside phosphate metabolic process;6.57708218533504e-07!GO:0043038;amino acid activation;7.93657144665002e-07!GO:0006418;tRNA aminoacylation for protein translation;7.93657144665002e-07!GO:0043039;tRNA aminoacylation;7.93657144665002e-07!GO:0006916;anti-apoptosis;8.5001501684649e-07!GO:0009056;catabolic process;8.5001501684649e-07!GO:0051187;cofactor catabolic process;1.03425999890713e-06!GO:0032446;protein modification by small protein conjugation;1.06638691609334e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.11374767032274e-06!GO:0000151;ubiquitin ligase complex;1.11675828652752e-06!GO:0006099;tricarboxylic acid cycle;1.18127011291028e-06!GO:0046356;acetyl-CoA catabolic process;1.18127011291028e-06!GO:0016491;oxidoreductase activity;1.18162439868634e-06!GO:0016567;protein ubiquitination;1.18560135872275e-06!GO:0050789;regulation of biological process;1.20420449974668e-06!GO:0045786;negative regulation of progression through cell cycle;1.21590060035136e-06!GO:0004386;helicase activity;1.26133116867023e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.32283945804845e-06!GO:0001558;regulation of cell growth;1.4454834401852e-06!GO:0006323;DNA packaging;1.61901089628238e-06!GO:0016310;phosphorylation;1.65037723608573e-06!GO:0006281;DNA repair;1.72780473980933e-06!GO:0065002;intracellular protein transport across a membrane;1.84381114162234e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.8846558363523e-06!GO:0009109;coenzyme catabolic process;1.91302130020837e-06!GO:0016564;transcription repressor activity;1.99932752759978e-06!GO:0005643;nuclear pore;2.74803989797646e-06!GO:0044431;Golgi apparatus part;2.98307547514313e-06!GO:0008026;ATP-dependent helicase activity;2.99770350889998e-06!GO:0009117;nucleotide metabolic process;3.18673286639218e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.29321505774361e-06!GO:0009108;coenzyme biosynthetic process;3.91903791080629e-06!GO:0031324;negative regulation of cellular metabolic process;3.95808597006708e-06!GO:0003714;transcription corepressor activity;4.11114793089214e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.3361593318909e-06!GO:0005525;GTP binding;4.53529442213322e-06!GO:0006084;acetyl-CoA metabolic process;4.54688059476589e-06!GO:0045259;proton-transporting ATP synthase complex;4.60188175168912e-06!GO:0009719;response to endogenous stimulus;5.47572885980634e-06!GO:0003713;transcription coactivator activity;6.59379760975939e-06!GO:0051276;chromosome organization and biogenesis;7.08477976153904e-06!GO:0005798;Golgi-associated vesicle;7.21226322540931e-06!GO:0005773;vacuole;7.26278639201819e-06!GO:0015980;energy derivation by oxidation of organic compounds;7.84513861925675e-06!GO:0031252;leading edge;8.63179808179648e-06!GO:0016023;cytoplasmic membrane-bound vesicle;8.74704771383274e-06!GO:0007005;mitochondrion organization and biogenesis;9.28805664517813e-06!GO:0030029;actin filament-based process;9.96855562407488e-06!GO:0031988;membrane-bound vesicle;1.01784302590557e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.02905744105631e-05!GO:0006752;group transfer coenzyme metabolic process;1.09989655428907e-05!GO:0008092;cytoskeletal protein binding;1.18974206391018e-05!GO:0005667;transcription factor complex;1.28615672252277e-05!GO:0004298;threonine endopeptidase activity;1.3166049462329e-05!GO:0051170;nuclear import;1.36585900915584e-05!GO:0051789;response to protein stimulus;1.38633552900592e-05!GO:0006986;response to unfolded protein;1.38633552900592e-05!GO:0009892;negative regulation of metabolic process;1.48363054374287e-05!GO:0065004;protein-DNA complex assembly;1.52881499238354e-05!GO:0006606;protein import into nucleus;1.61131075660598e-05!GO:0006091;generation of precursor metabolites and energy;1.80920516175199e-05!GO:0046930;pore complex;1.96092257228725e-05!GO:0005770;late endosome;2.11758685435378e-05!GO:0043566;structure-specific DNA binding;2.16599699451757e-05!GO:0000278;mitotic cell cycle;2.43561574860388e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.45523495539976e-05!GO:0000245;spliceosome assembly;2.52513147168434e-05!GO:0005762;mitochondrial large ribosomal subunit;2.81617102061264e-05!GO:0000315;organellar large ribosomal subunit;2.81617102061264e-05!GO:0016787;hydrolase activity;2.85905680399846e-05!GO:0050657;nucleic acid transport;2.93329274724176e-05!GO:0051236;establishment of RNA localization;2.93329274724176e-05!GO:0050658;RNA transport;2.93329274724176e-05!GO:0043623;cellular protein complex assembly;2.9595383361881e-05!GO:0006403;RNA localization;3.13368687491095e-05!GO:0032561;guanyl ribonucleotide binding;3.54408705001282e-05!GO:0019001;guanyl nucleotide binding;3.54408705001282e-05!GO:0005905;coated pit;4.0199843650206e-05!GO:0016563;transcription activator activity;4.14880367697015e-05!GO:0007243;protein kinase cascade;4.29306436016138e-05!GO:0048522;positive regulation of cellular process;4.37574444466251e-05!GO:0031982;vesicle;4.50677951566872e-05!GO:0031410;cytoplasmic vesicle;4.70612729263267e-05!GO:0006613;cotranslational protein targeting to membrane;4.70612729263267e-05!GO:0044440;endosomal part;5.78850367238762e-05!GO:0010008;endosome membrane;5.78850367238762e-05!GO:0040008;regulation of growth;6.41481199192865e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.4409443385423e-05!GO:0016740;transferase activity;8.22736968966867e-05!GO:0019843;rRNA binding;8.22736968966867e-05!GO:0003697;single-stranded DNA binding;8.35599989867283e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.54521304730333e-05!GO:0019867;outer membrane;8.54521304730333e-05!GO:0007010;cytoskeleton organization and biogenesis;8.9652271886764e-05!GO:0016481;negative regulation of transcription;9.19473259989923e-05!GO:0030133;transport vesicle;0.000103760703840377!GO:0006364;rRNA processing;0.000105617569517337!GO:0008654;phospholipid biosynthetic process;0.000105617569517337!GO:0016568;chromatin modification;0.000106507905173634!GO:0006333;chromatin assembly or disassembly;0.000107274140051089!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000111849289674356!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000115906136988778!GO:0031968;organelle outer membrane;0.000130403249617349!GO:0016072;rRNA metabolic process;0.000133279600424642!GO:0000323;lytic vacuole;0.000149142478483233!GO:0005764;lysosome;0.000149142478483233!GO:0005769;early endosome;0.00015432074815336!GO:0030867;rough endoplasmic reticulum membrane;0.000155729202520858!GO:0045454;cell redox homeostasis;0.000164411026698477!GO:0005694;chromosome;0.000184171558117217!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00021215571355824!GO:0000314;organellar small ribosomal subunit;0.00024693058442625!GO:0005763;mitochondrial small ribosomal subunit;0.00024693058442625!GO:0019222;regulation of metabolic process;0.000258306738553952!GO:0051427;hormone receptor binding;0.000269652520574817!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000272898070534448!GO:0003724;RNA helicase activity;0.000291387582622752!GO:0005741;mitochondrial outer membrane;0.000294676795517456!GO:0016859;cis-trans isomerase activity;0.000297506903525963!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000297506903525963!GO:0000139;Golgi membrane;0.000303391467406576!GO:0033116;ER-Golgi intermediate compartment membrane;0.000316089586535937!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000341111856745983!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000355170016942112!GO:0015399;primary active transmembrane transporter activity;0.000355170016942112!GO:0051028;mRNA transport;0.000361480881507921!GO:0005885;Arp2/3 protein complex;0.000363072298573338!GO:0007264;small GTPase mediated signal transduction;0.000378290115038075!GO:0048471;perinuclear region of cytoplasm;0.00038116092261083!GO:0016197;endosome transport;0.000413648246901658!GO:0043021;ribonucleoprotein binding;0.000443749241686487!GO:0030663;COPI coated vesicle membrane;0.000444483265837236!GO:0030126;COPI vesicle coat;0.000444483265837236!GO:0006260;DNA replication;0.000469526016373015!GO:0000785;chromatin;0.000476573348091586!GO:0035257;nuclear hormone receptor binding;0.000493024122089248!GO:0004576;oligosaccharyl transferase activity;0.000545457991164443!GO:0043284;biopolymer biosynthetic process;0.000558615247364528!GO:0016853;isomerase activity;0.000565092960122282!GO:0015630;microtubule cytoskeleton;0.000611444150848124!GO:0008250;oligosaccharyl transferase complex;0.000624289914460279!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000644591745413396!GO:0030132;clathrin coat of coated pit;0.000648795641408004!GO:0019899;enzyme binding;0.000691397484024179!GO:0030137;COPI-coated vesicle;0.000771876619716881!GO:0044262;cellular carbohydrate metabolic process;0.000799178270388634!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000819056578638607!GO:0007050;cell cycle arrest;0.000875795840509202!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000999976069459323!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104706895227359!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00105299729065422!GO:0016779;nucleotidyltransferase activity;0.00105698913115427!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00105698913115427!GO:0051128;regulation of cellular component organization and biogenesis;0.00112515708221779!GO:0005048;signal sequence binding;0.00113196121616246!GO:0065007;biological regulation;0.00113196121616246!GO:0006414;translational elongation;0.0011617552175026!GO:0006892;post-Golgi vesicle-mediated transport;0.00116385447173898!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00120036168486705!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00128606417964149!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00128606417964149!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00128606417964149!GO:0051920;peroxiredoxin activity;0.00129717021593465!GO:0003729;mRNA binding;0.00132826788885191!GO:0006612;protein targeting to membrane;0.00143441553062571!GO:0009165;nucleotide biosynthetic process;0.00144702608284241!GO:0044427;chromosomal part;0.00168018347627378!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00182036803460254!GO:0048518;positive regulation of biological process;0.00202536668174992!GO:0045893;positive regulation of transcription, DNA-dependent;0.00203999716435002!GO:0009967;positive regulation of signal transduction;0.00205042386843638!GO:0045892;negative regulation of transcription, DNA-dependent;0.00222855247274144!GO:0005813;centrosome;0.00227364984524689!GO:0030658;transport vesicle membrane;0.00229156688927059!GO:0051325;interphase;0.00235156545879837!GO:0003690;double-stranded DNA binding;0.00236245474096026!GO:0030118;clathrin coat;0.00236976016862091!GO:0051329;interphase of mitotic cell cycle;0.00241715981609021!GO:0051168;nuclear export;0.00246783310023389!GO:0045941;positive regulation of transcription;0.00249835167537118!GO:0018196;peptidyl-asparagine modification;0.00266689619600778!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00266689619600778!GO:0006334;nucleosome assembly;0.0027002154873501!GO:0046474;glycerophospholipid biosynthetic process;0.00281316450982252!GO:0008186;RNA-dependent ATPase activity;0.0030145535495544!GO:0008154;actin polymerization and/or depolymerization;0.00317468195678628!GO:0004177;aminopeptidase activity;0.00322152486163604!GO:0022890;inorganic cation transmembrane transporter activity;0.00341968023737611!GO:0016044;membrane organization and biogenesis;0.00342053813560425!GO:0051252;regulation of RNA metabolic process;0.00344266737490858!GO:0005520;insulin-like growth factor binding;0.00349010408311171!GO:0005815;microtubule organizing center;0.00353199792613771!GO:0003779;actin binding;0.00355655120653552!GO:0048500;signal recognition particle;0.00380521212018887!GO:0006509;membrane protein ectodomain proteolysis;0.00397501279011179!GO:0033619;membrane protein proteolysis;0.00397501279011179!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00400770603581063!GO:0022403;cell cycle phase;0.00407148693274865!GO:0031072;heat shock protein binding;0.00414294204107719!GO:0031497;chromatin assembly;0.00418356716820302!GO:0051287;NAD binding;0.00432153204792348!GO:0006402;mRNA catabolic process;0.00432153204792348!GO:0015992;proton transport;0.00436116108847137!GO:0017166;vinculin binding;0.00437148991078364!GO:0048468;cell development;0.00438793519180423!GO:0006650;glycerophospholipid metabolic process;0.00452062777277462!GO:0004674;protein serine/threonine kinase activity;0.00464813768905663!GO:0006818;hydrogen transport;0.0047156681041067!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00486744230329731!GO:0006383;transcription from RNA polymerase III promoter;0.00491444907779409!GO:0003899;DNA-directed RNA polymerase activity;0.00508162202411367!GO:0016363;nuclear matrix;0.00523962600464016!GO:0051540;metal cluster binding;0.00536978196151946!GO:0051536;iron-sulfur cluster binding;0.00536978196151946!GO:0043488;regulation of mRNA stability;0.00540234100589101!GO:0043487;regulation of RNA stability;0.00540234100589101!GO:0043492;ATPase activity, coupled to movement of substances;0.00560756604553794!GO:0001726;ruffle;0.00569483241961345!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00571648088455413!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00571648088455413!GO:0005791;rough endoplasmic reticulum;0.0057409439521222!GO:0030027;lamellipodium;0.00593788244230653!GO:0030521;androgen receptor signaling pathway;0.00618066527362911!GO:0030041;actin filament polymerization;0.00627095387886734!GO:0030660;Golgi-associated vesicle membrane;0.00660602992575956!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00661944357508949!GO:0003746;translation elongation factor activity;0.00663553376304391!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00663553376304391!GO:0015002;heme-copper terminal oxidase activity;0.00663553376304391!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00663553376304391!GO:0004129;cytochrome-c oxidase activity;0.00663553376304391!GO:0007006;mitochondrial membrane organization and biogenesis;0.00666207520197666!GO:0006839;mitochondrial transport;0.00667942136480225!GO:0043681;protein import into mitochondrion;0.00683744435565253!GO:0005581;collagen;0.00685439469898573!GO:0015631;tubulin binding;0.00710102543006958!GO:0046489;phosphoinositide biosynthetic process;0.0071383280049586!GO:0006740;NADPH regeneration;0.00718803542267063!GO:0006098;pentose-phosphate shunt;0.00718803542267063!GO:0030659;cytoplasmic vesicle membrane;0.00741045064932517!GO:0003711;transcription elongation regulator activity;0.00751588012096116!GO:0004004;ATP-dependent RNA helicase activity;0.00752838599819161!GO:0030119;AP-type membrane coat adaptor complex;0.00758731810989891!GO:0030127;COPII vesicle coat;0.00760183007132498!GO:0012507;ER to Golgi transport vesicle membrane;0.00760183007132498!GO:0030134;ER to Golgi transport vesicle;0.00760387835296056!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00768720305343884!GO:0045047;protein targeting to ER;0.00768720305343884!GO:0065009;regulation of a molecular function;0.00782893489845398!GO:0006352;transcription initiation;0.0085849327412798!GO:0008022;protein C-terminus binding;0.0090587785938193!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00918938247211088!GO:0048487;beta-tubulin binding;0.00919579625930968!GO:0008047;enzyme activator activity;0.00951873665660721!GO:0000059;protein import into nucleus, docking;0.00980703908522084!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0100783948869449!GO:0008320;protein transmembrane transporter activity;0.0100783948869449!GO:0008139;nuclear localization sequence binding;0.0101145029679227!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0102085342141581!GO:0005869;dynactin complex;0.0102692888475042!GO:0030176;integral to endoplasmic reticulum membrane;0.0102866509909107!GO:0000049;tRNA binding;0.0109956316997696!GO:0030518;steroid hormone receptor signaling pathway;0.0111311570769446!GO:0035258;steroid hormone receptor binding;0.0119282623495798!GO:0043433;negative regulation of transcription factor activity;0.0121911200678343!GO:0006626;protein targeting to mitochondrion;0.0122084935377946!GO:0030125;clathrin vesicle coat;0.012297989387381!GO:0030665;clathrin coated vesicle membrane;0.012297989387381!GO:0007040;lysosome organization and biogenesis;0.0123777619533016!GO:0051101;regulation of DNA binding;0.0124276813217327!GO:0031902;late endosome membrane;0.0124396552797055!GO:0031529;ruffle organization and biogenesis;0.0127312681397633!GO:0030131;clathrin adaptor complex;0.0128172002034872!GO:0008286;insulin receptor signaling pathway;0.0128172002034872!GO:0030032;lamellipodium biogenesis;0.012893541991375!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0128979408368875!GO:0033043;regulation of organelle organization and biogenesis;0.0128979408368875!GO:0051087;chaperone binding;0.0132142596307539!GO:0007030;Golgi organization and biogenesis;0.0135014069497165!GO:0040029;regulation of gene expression, epigenetic;0.0137909566791317!GO:0051539;4 iron, 4 sulfur cluster binding;0.013857362459206!GO:0008312;7S RNA binding;0.0145520964407164!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0146591643983353!GO:0045792;negative regulation of cell size;0.0148648192680039!GO:0006979;response to oxidative stress;0.0158278751902945!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0163334288166308!GO:0030308;negative regulation of cell growth;0.0163643443256268!GO:0000082;G1/S transition of mitotic cell cycle;0.0165502018747278!GO:0030833;regulation of actin filament polymerization;0.0166164568538099!GO:0006289;nucleotide-excision repair;0.0167300277979118!GO:0031323;regulation of cellular metabolic process;0.0169236758197532!GO:0050811;GABA receptor binding;0.0170724531995525!GO:0006354;RNA elongation;0.0172092769130632!GO:0043022;ribosome binding;0.0173557337100619!GO:0005096;GTPase activator activity;0.0173901305580805!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0175193144435458!GO:0030880;RNA polymerase complex;0.0180280343610672!GO:0007160;cell-matrix adhesion;0.0182388641858693!GO:0006595;polyamine metabolic process;0.0185276709494703!GO:0031543;peptidyl-proline dioxygenase activity;0.0185945394633364!GO:0000087;M phase of mitotic cell cycle;0.0185945394633364!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0186629426156605!GO:0031589;cell-substrate adhesion;0.0187813807378165!GO:0050662;coenzyme binding;0.0188134937883178!GO:0031625;ubiquitin protein ligase binding;0.0188160496624462!GO:0006778;porphyrin metabolic process;0.0195400631132426!GO:0033013;tetrapyrrole metabolic process;0.0195400631132426!GO:0006607;NLS-bearing substrate import into nucleus;0.0200035484849336!GO:0022884;macromolecule transmembrane transporter activity;0.0203187819185775!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0203187819185775!GO:0030384;phosphoinositide metabolic process;0.0203332195312596!GO:0007067;mitosis;0.0214745901175124!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0214745901175124!GO:0007265;Ras protein signal transduction;0.0216179359930574!GO:0046483;heterocycle metabolic process;0.0221311452459454!GO:0005684;U2-dependent spliceosome;0.0221848094176755!GO:0051301;cell division;0.0231010868875606!GO:0008180;signalosome;0.0231010868875606!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0231010868875606!GO:0050681;androgen receptor binding;0.0231010868875606!GO:0044433;cytoplasmic vesicle part;0.0231010868875606!GO:0032906;transforming growth factor-beta2 production;0.0231010868875606!GO:0032909;regulation of transforming growth factor-beta2 production;0.0231010868875606!GO:0005586;collagen type III;0.0233318416123846!GO:0000902;cell morphogenesis;0.0243580167620224!GO:0032989;cellular structure morphogenesis;0.0243580167620224!GO:0042802;identical protein binding;0.024465616171231!GO:0016272;prefoldin complex;0.024465616171231!GO:0016301;kinase activity;0.0245781403181545!GO:0005100;Rho GTPase activator activity;0.0247100360569302!GO:0003684;damaged DNA binding;0.0247100360569302!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0247100360569302!GO:0035035;histone acetyltransferase binding;0.0247477285437754!GO:0051098;regulation of binding;0.0255416041953696!GO:0007033;vacuole organization and biogenesis;0.0255930933313463!GO:0006739;NADP metabolic process;0.0255930933313463!GO:0046467;membrane lipid biosynthetic process;0.0257698305534467!GO:0000339;RNA cap binding;0.0261057710470989!GO:0045334;clathrin-coated endocytic vesicle;0.0261722963848314!GO:0005637;nuclear inner membrane;0.0264457948375206!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0267837874163282!GO:0006401;RNA catabolic process;0.0268613271723055!GO:0009966;regulation of signal transduction;0.0268613271723055!GO:0008147;structural constituent of bone;0.0271153186197211!GO:0006417;regulation of translation;0.0277025737613394!GO:0005774;vacuolar membrane;0.0280935786629684!GO:0006497;protein amino acid lipidation;0.028240060083778!GO:0005862;muscle thin filament tropomyosin;0.0288108727607175!GO:0030128;clathrin coat of endocytic vesicle;0.0291618326867613!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0291618326867613!GO:0030122;AP-2 adaptor complex;0.0291618326867613!GO:0050178;phenylpyruvate tautomerase activity;0.0293101898620185!GO:0030031;cell projection biogenesis;0.0297998177249491!GO:0045045;secretory pathway;0.0300059368051645!GO:0000209;protein polyubiquitination;0.0302105345506876!GO:0007242;intracellular signaling cascade;0.0302105345506876!GO:0008234;cysteine-type peptidase activity;0.0304556842598361!GO:0006350;transcription;0.0305031099016256!GO:0005801;cis-Golgi network;0.0305031099016256!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0305730400167246!GO:0000428;DNA-directed RNA polymerase complex;0.0305730400167246!GO:0031901;early endosome membrane;0.031248236313728!GO:0045936;negative regulation of phosphate metabolic process;0.0315950453201427!GO:0008632;apoptotic program;0.0325685549698489!GO:0005832;chaperonin-containing T-complex;0.0330230686529976!GO:0007569;cell aging;0.0337290572315131!GO:0031272;regulation of pseudopodium formation;0.0343468803322385!GO:0031269;pseudopodium formation;0.0343468803322385!GO:0031344;regulation of cell projection organization and biogenesis;0.0343468803322385!GO:0031268;pseudopodium organization and biogenesis;0.0343468803322385!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0343468803322385!GO:0031274;positive regulation of pseudopodium formation;0.0343468803322385!GO:0016126;sterol biosynthetic process;0.035749377556875!GO:0031418;L-ascorbic acid binding;0.0360006710037323!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0360716411804761!GO:0010257;NADH dehydrogenase complex assembly;0.0360716411804761!GO:0033108;mitochondrial respiratory chain complex assembly;0.0360716411804761!GO:0019752;carboxylic acid metabolic process;0.0361313249672879!GO:0006082;organic acid metabolic process;0.0366414163640997!GO:0042168;heme metabolic process;0.0369051578114109!GO:0006984;ER-nuclear signaling pathway;0.0373229198501446!GO:0000287;magnesium ion binding;0.0378508234863267!GO:0030522;intracellular receptor-mediated signaling pathway;0.0381155513570822!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0381921809571859!GO:0016791;phosphoric monoester hydrolase activity;0.0382982237405705!GO:0045926;negative regulation of growth;0.0387013699056155!GO:0033559;unsaturated fatty acid metabolic process;0.0387692727589822!GO:0006636;unsaturated fatty acid biosynthetic process;0.0387692727589822!GO:0033673;negative regulation of kinase activity;0.0387841977813788!GO:0006469;negative regulation of protein kinase activity;0.0387841977813788!GO:0019798;procollagen-proline dioxygenase activity;0.0398276982378793!GO:0031371;ubiquitin conjugating enzyme complex;0.0398276982378793!GO:0044452;nucleolar part;0.0399324296625083!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0401088557083609!GO:0016251;general RNA polymerase II transcription factor activity;0.0403458669578952!GO:0030503;regulation of cell redox homeostasis;0.0405023057949242!GO:0030508;thiol-disulfide exchange intermediate activity;0.0421081619817967!GO:0030836;positive regulation of actin filament depolymerization;0.0426254798687796!GO:0030911;TPR domain binding;0.0427107029738327!GO:0012506;vesicle membrane;0.0427107029738327!GO:0007021;tubulin folding;0.0432726802189161!GO:0007034;vacuolar transport;0.043728944073801!GO:0022415;viral reproductive process;0.044434749782935!GO:0006779;porphyrin biosynthetic process;0.0444499127704797!GO:0033014;tetrapyrrole biosynthetic process;0.0444499127704797!GO:0006118;electron transport;0.0446643603957322!GO:0008033;tRNA processing;0.0450487553332335!GO:0016408;C-acyltransferase activity;0.0457436898698046!GO:0000096;sulfur amino acid metabolic process;0.0457436898698046!GO:0045639;positive regulation of myeloid cell differentiation;0.0460270255008735!GO:0006376;mRNA splice site selection;0.0460270255008735!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0460270255008735!GO:0009081;branched chain family amino acid metabolic process;0.0460623256260223!GO:0031124;mRNA 3'-end processing;0.0462322438206012!GO:0001725;stress fiber;0.0463634536918459!GO:0032432;actin filament bundle;0.0463634536918459!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0463647766605442!GO:0006302;double-strand break repair;0.0467906899618367!GO:0006144;purine base metabolic process;0.0472782334702629!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0472782334702629!GO:0004784;superoxide dismutase activity;0.0472782334702629!GO:0048144;fibroblast proliferation;0.0472975052035847!GO:0048145;regulation of fibroblast proliferation;0.0472975052035847!GO:0005583;fibrillar collagen;0.0475178688613125!GO:0010468;regulation of gene expression;0.0481732979857027!GO:0006611;protein export from nucleus;0.0482199794020857!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0485075783190192!GO:0051059;NF-kappaB binding;0.0487740319259881!GO:0051348;negative regulation of transferase activity;0.0488593109209919!GO:0046914;transition metal ion binding;0.0491032185684119!GO:0048146;positive regulation of fibroblast proliferation;0.0498175873002974
 
|sample_id=11933
 
|sample_id=11933
 
|sample_note=
 
|sample_note=
Line 76: Line 103:
 
|sample_tissue=ANATOMICAL SYSTEM
 
|sample_tissue=ANATOMICAL SYSTEM
 
|top_motifs=EVI1:2.99447364017;HMGA1,2:2.9497294799;FOXL1:2.70642503391;NKX2-2,8:2.68910525374;TAL1_TCF{3,4,12}:2.68647589753;AIRE:2.42880385182;UFEwm:2.34631461817;GLI1..3:2.27105661351;HES1:2.11717327854;ALX4:2.08375875033;HIF1A:2.04312576256;PRDM1:1.97930405464;NR3C1:1.89637813529;GATA4:1.77307349289;KLF4:1.72554132311;ZNF384:1.63158195087;TOPORS:1.5924009644;NR6A1:1.58392421623;MYBL2:1.5801815694;FOXD3:1.57777671564;NKX3-1:1.52583771925;ESR1:1.41058283541;SRF:1.39341139708;TEAD1:1.34145873711;ZIC1..3:1.32462135137;RXRA_VDR{dimer}:1.2544980363;LHX3,4:1.24997943665;NFE2L1:1.23735630899;ZBTB16:1.22748715816;NKX6-1,2:1.08972340215;RXR{A,B,G}:1.08006517242;TEF:1.06815085089;BPTF:0.927067599635;PAX4:0.906765071148;TFAP2{A,C}:0.903735905449;HOX{A4,D4}:0.869495213555;FOXP1:0.862892704888;TFCP2:0.857102163385;EBF1:0.823879931693;TFAP2B:0.788639522009;ZBTB6:0.756493821252;ZNF423:0.731672663007;PATZ1:0.695377671183;XCPE1{core}:0.692155867287;GZF1:0.690619544878;GTF2I:0.688991391416;TLX1..3_NFIC{dimer}:0.688829606857;ADNP_IRX_SIX_ZHX:0.68498435734;NANOG{mouse}:0.667815839974;ATF6:0.66371869537;PITX1..3:0.657600493614;NFATC1..3:0.617619813063;MAZ:0.600756150023;CDX1,2,4:0.591074696713;NKX3-2:0.573037646701;PPARG:0.527283224288;IRF1,2:0.50198613078;SOX5:0.500531020861;TP53:0.492158644975;MTE{core}:0.491970820341;TFAP4:0.437177133993;EN1,2:0.436711096352;FOX{I1,J2}:0.434882932929;HSF1,2:0.424906146809;HAND1,2:0.3938758029;HOX{A5,B5}:0.390674769662;XBP1:0.390662082175;FOXO1,3,4:0.373192223193;IKZF1:0.36186868605;HIC1:0.358076744923;RREB1:0.342592834506;TBX4,5:0.328913067958;IKZF2:0.290392680008;MAFB:0.255673207753;SPZ1:0.249934653002;HMX1:0.248296657015;NKX2-1,4:0.24566349374;GTF2A1,2:0.2424785167;SMAD1..7,9:0.206190399512;STAT2,4,6:0.198444201586;PAX5:0.181821044335;FOXA2:0.180524457779;SOX17:0.176921428567;POU6F1:0.170810825931;ZFP161:0.168501030988;MZF1:0.142297733467;AHR_ARNT_ARNT2:0.116223298243;HLF:0.107801483286;POU5F1:0.0838157880359;ZNF238:0.0505115715233;MTF1:0.0290902946254;NR1H4:0.0199966162959;SP1:0.0121395809372;DMAP1_NCOR{1,2}_SMARC:0.0118847133475;FOX{D1,D2}:-0.0118928519913;NFE2L2:-0.0441111151408;ONECUT1,2:-0.0623741876378;MEF2{A,B,C,D}:-0.063648540852;DBP:-0.0696389227376;GFI1B:-0.0975947444331;MED-1{core}:-0.131485272358;EGR1..3:-0.143280146465;MYFfamily:-0.148283510543;CDC5L:-0.189088668345;FOXP3:-0.200560271628;VSX1,2:-0.234026683359;TBP:-0.238743239147;NFE2:-0.250962976424;REST:-0.255416924525;RBPJ:-0.257871690495;BACH2:-0.265149052515;ZNF148:-0.283101211109;POU1F1:-0.290488446428;NHLH1,2:-0.294435393936;PAX3,7:-0.325336043176;PAX1,9:-0.327124532518;NFKB1_REL_RELA:-0.333915260616;FOSL2:-0.337824328755;NFIX:-0.350529661644;GCM1,2:-0.355424286484;HNF1A:-0.360958909511;FOS_FOS{B,L1}_JUN{B,D}:-0.36136522467;NR5A1,2:-0.376535531438;FOXM1:-0.390789855265;SOX2:-0.401126094791;HOX{A6,A7,B6,B7}:-0.404083932226;CEBPA,B_DDIT3:-0.429737789429;STAT5{A,B}:-0.435693713351;SREBF1,2:-0.439848886116;SNAI1..3:-0.44836748795;PAX8:-0.452005382423;TFDP1:-0.463316593013;RFX1:-0.478989604731;NFIL3:-0.486366057654;ARID5B:-0.4971957638;IRF7:-0.498654890484;ZNF143:-0.510349559756;HNF4A_NR2F1,2:-0.515186859822;YY1:-0.520373963322;TLX2:-0.525045596595;ELK1,4_GABP{A,B1}:-0.526164414987;bHLH_family:-0.579044239214;AR:-0.585949375328;ATF2:-0.58768792695;BREu{core}:-0.626257158001;NRF1:-0.633508255852;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.636689130084;MYB:-0.637852669572;PDX1:-0.654702155777;ETS1,2:-0.671521657804;LMO2:-0.672529853204;PAX6:-0.677422302899;NKX2-3_NKX2-5:-0.677438829134;RUNX1..3:-0.691544307796;FOXN1:-0.693136954512;CUX2:-0.702723898242;SPI1:-0.706936146245;SPIB:-0.711999039852;PAX2:-0.728740013783;E2F1..5:-0.755244096979;FOXQ1:-0.765768270842;CREB1:-0.773559598329;ATF5_CREB3:-0.779269206187;POU3F1..4:-0.799826040292;STAT1,3:-0.822721076994;ATF4:-0.846184032567;OCT4_SOX2{dimer}:-0.873137185304;LEF1_TCF7_TCF7L1,2:-0.92955850177;PRRX1,2:-0.945763051388;ELF1,2,4:-0.94716999841;T:-0.951373242963;POU2F1..3:-1.00610641729;GFI1:-1.00888108549;EP300:-1.04901555821;RFX2..5_RFXANK_RFXAP:-1.0632801014;ZEB1:-1.0687729358;JUN:-1.10458701291;CRX:-1.16293761891;HBP1_HMGB_SSRP1_UBTF:-1.16561344843;NANOG:-1.30670866894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.31788609579;ALX1:-1.32848877224;FOX{F1,F2,J1}:-1.34849546677;RORA:-1.35750302627;SOX{8,9,10}:-1.40756784963;TGIF1:-1.41436624496;NFY{A,B,C}:-1.4412677127;GATA6:-1.47138814291;ESRRA:-1.50073359473;MYOD1:-1.68823503901;HOXA9_MEIS1:-1.80907846226;PBX1:-2.06053271599
 
|top_motifs=EVI1:2.99447364017;HMGA1,2:2.9497294799;FOXL1:2.70642503391;NKX2-2,8:2.68910525374;TAL1_TCF{3,4,12}:2.68647589753;AIRE:2.42880385182;UFEwm:2.34631461817;GLI1..3:2.27105661351;HES1:2.11717327854;ALX4:2.08375875033;HIF1A:2.04312576256;PRDM1:1.97930405464;NR3C1:1.89637813529;GATA4:1.77307349289;KLF4:1.72554132311;ZNF384:1.63158195087;TOPORS:1.5924009644;NR6A1:1.58392421623;MYBL2:1.5801815694;FOXD3:1.57777671564;NKX3-1:1.52583771925;ESR1:1.41058283541;SRF:1.39341139708;TEAD1:1.34145873711;ZIC1..3:1.32462135137;RXRA_VDR{dimer}:1.2544980363;LHX3,4:1.24997943665;NFE2L1:1.23735630899;ZBTB16:1.22748715816;NKX6-1,2:1.08972340215;RXR{A,B,G}:1.08006517242;TEF:1.06815085089;BPTF:0.927067599635;PAX4:0.906765071148;TFAP2{A,C}:0.903735905449;HOX{A4,D4}:0.869495213555;FOXP1:0.862892704888;TFCP2:0.857102163385;EBF1:0.823879931693;TFAP2B:0.788639522009;ZBTB6:0.756493821252;ZNF423:0.731672663007;PATZ1:0.695377671183;XCPE1{core}:0.692155867287;GZF1:0.690619544878;GTF2I:0.688991391416;TLX1..3_NFIC{dimer}:0.688829606857;ADNP_IRX_SIX_ZHX:0.68498435734;NANOG{mouse}:0.667815839974;ATF6:0.66371869537;PITX1..3:0.657600493614;NFATC1..3:0.617619813063;MAZ:0.600756150023;CDX1,2,4:0.591074696713;NKX3-2:0.573037646701;PPARG:0.527283224288;IRF1,2:0.50198613078;SOX5:0.500531020861;TP53:0.492158644975;MTE{core}:0.491970820341;TFAP4:0.437177133993;EN1,2:0.436711096352;FOX{I1,J2}:0.434882932929;HSF1,2:0.424906146809;HAND1,2:0.3938758029;HOX{A5,B5}:0.390674769662;XBP1:0.390662082175;FOXO1,3,4:0.373192223193;IKZF1:0.36186868605;HIC1:0.358076744923;RREB1:0.342592834506;TBX4,5:0.328913067958;IKZF2:0.290392680008;MAFB:0.255673207753;SPZ1:0.249934653002;HMX1:0.248296657015;NKX2-1,4:0.24566349374;GTF2A1,2:0.2424785167;SMAD1..7,9:0.206190399512;STAT2,4,6:0.198444201586;PAX5:0.181821044335;FOXA2:0.180524457779;SOX17:0.176921428567;POU6F1:0.170810825931;ZFP161:0.168501030988;MZF1:0.142297733467;AHR_ARNT_ARNT2:0.116223298243;HLF:0.107801483286;POU5F1:0.0838157880359;ZNF238:0.0505115715233;MTF1:0.0290902946254;NR1H4:0.0199966162959;SP1:0.0121395809372;DMAP1_NCOR{1,2}_SMARC:0.0118847133475;FOX{D1,D2}:-0.0118928519913;NFE2L2:-0.0441111151408;ONECUT1,2:-0.0623741876378;MEF2{A,B,C,D}:-0.063648540852;DBP:-0.0696389227376;GFI1B:-0.0975947444331;MED-1{core}:-0.131485272358;EGR1..3:-0.143280146465;MYFfamily:-0.148283510543;CDC5L:-0.189088668345;FOXP3:-0.200560271628;VSX1,2:-0.234026683359;TBP:-0.238743239147;NFE2:-0.250962976424;REST:-0.255416924525;RBPJ:-0.257871690495;BACH2:-0.265149052515;ZNF148:-0.283101211109;POU1F1:-0.290488446428;NHLH1,2:-0.294435393936;PAX3,7:-0.325336043176;PAX1,9:-0.327124532518;NFKB1_REL_RELA:-0.333915260616;FOSL2:-0.337824328755;NFIX:-0.350529661644;GCM1,2:-0.355424286484;HNF1A:-0.360958909511;FOS_FOS{B,L1}_JUN{B,D}:-0.36136522467;NR5A1,2:-0.376535531438;FOXM1:-0.390789855265;SOX2:-0.401126094791;HOX{A6,A7,B6,B7}:-0.404083932226;CEBPA,B_DDIT3:-0.429737789429;STAT5{A,B}:-0.435693713351;SREBF1,2:-0.439848886116;SNAI1..3:-0.44836748795;PAX8:-0.452005382423;TFDP1:-0.463316593013;RFX1:-0.478989604731;NFIL3:-0.486366057654;ARID5B:-0.4971957638;IRF7:-0.498654890484;ZNF143:-0.510349559756;HNF4A_NR2F1,2:-0.515186859822;YY1:-0.520373963322;TLX2:-0.525045596595;ELK1,4_GABP{A,B1}:-0.526164414987;bHLH_family:-0.579044239214;AR:-0.585949375328;ATF2:-0.58768792695;BREu{core}:-0.626257158001;NRF1:-0.633508255852;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.636689130084;MYB:-0.637852669572;PDX1:-0.654702155777;ETS1,2:-0.671521657804;LMO2:-0.672529853204;PAX6:-0.677422302899;NKX2-3_NKX2-5:-0.677438829134;RUNX1..3:-0.691544307796;FOXN1:-0.693136954512;CUX2:-0.702723898242;SPI1:-0.706936146245;SPIB:-0.711999039852;PAX2:-0.728740013783;E2F1..5:-0.755244096979;FOXQ1:-0.765768270842;CREB1:-0.773559598329;ATF5_CREB3:-0.779269206187;POU3F1..4:-0.799826040292;STAT1,3:-0.822721076994;ATF4:-0.846184032567;OCT4_SOX2{dimer}:-0.873137185304;LEF1_TCF7_TCF7L1,2:-0.92955850177;PRRX1,2:-0.945763051388;ELF1,2,4:-0.94716999841;T:-0.951373242963;POU2F1..3:-1.00610641729;GFI1:-1.00888108549;EP300:-1.04901555821;RFX2..5_RFXANK_RFXAP:-1.0632801014;ZEB1:-1.0687729358;JUN:-1.10458701291;CRX:-1.16293761891;HBP1_HMGB_SSRP1_UBTF:-1.16561344843;NANOG:-1.30670866894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.31788609579;ALX1:-1.32848877224;FOX{F1,F2,J1}:-1.34849546677;RORA:-1.35750302627;SOX{8,9,10}:-1.40756784963;TGIF1:-1.41436624496;NFY{A,B,C}:-1.4412677127;GATA6:-1.47138814291;ESRRA:-1.50073359473;MYOD1:-1.68823503901;HOXA9_MEIS1:-1.80907846226;PBX1:-2.06053271599
 +
|xref=
 
}}
 
}}

Latest revision as of 12:32, 10 August 2017

Name:Olfactory epithelial cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13816
Sample type:primary cells
Genomic View: UCSC
MicroRNAs:Including candidate novel miRNAs(CAGE samples)
Excluding candidate novel miRNAs(CAGE samples)
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueANATOMICAL SYSTEM
dev stageNA
sexmale
age59
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Accession numbers
MethodSample accession id
CAGE  SAMD00005191
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13816 CAGE DRX008384 DRR009256
Accession ID Hg19

Library idBAMCTSS
CNhs13816 DRZ000681 DRZ002066
Accession ID Hg38

Library idBAMCTSS
CNhs13816 DRZ012031 DRZ013416
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
RNA-Seq  SAMD00005191
Library accession numbers

Library idMethodExp. accession idRun accession id
RDhi10094 RNA-Seq DRX057151 DRR062910
Accession ID Hg19

Library idBAMCTSS
RDhi10094 DRZ007986


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0363
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma--0.285
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair1.015
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.352
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19--0.0764
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0926
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.517
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.0578
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.105
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.263
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus--0.371
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.569
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0821
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma1.006
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.31
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.498
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0821
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.361
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.324
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0821
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal1.08
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.841
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.695
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.352
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic1.225
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0228
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal1.072
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13816

Jaspar motif P-value
MA0002.2 0.0128
MA0003.1 0.57
MA0004.1 0.135
MA0006.1 0.367
MA0007.1 0.804
MA0009.1 0.473
MA0014.1 0.397
MA0017.1 0.0723
MA0018.2 2.90522e-6
MA0019.1 0.224
MA0024.1 2.55127e-4
MA0025.1 0.00223
MA0027.1 0.499
MA0028.1 0.0032
MA0029.1 0.655
MA0030.1 0.0259
MA0031.1 0.118
MA0035.2 0.00527
MA0038.1 0.00602
MA0039.2 0.00361
MA0040.1 0.437
MA0041.1 0.247
MA0042.1 0.75
MA0043.1 3.36081e-5
MA0046.1 0.261
MA0047.2 0.15
MA0048.1 0.00182
MA0050.1 0.805
MA0051.1 0.867
MA0052.1 0.142
MA0055.1 0.92
MA0057.1 0.245
MA0058.1 0.00846
MA0059.1 0.544
MA0060.1 9.93454e-15
MA0061.1 0.131
MA0062.2 9.07563e-11
MA0065.2 0.588
MA0066.1 0.481
MA0067.1 0.00462
MA0068.1 0.65
MA0069.1 0.283
MA0070.1 0.601
MA0071.1 0.981
MA0072.1 0.159
MA0073.1 0.198
MA0074.1 0.224
MA0076.1 4.27733e-5
MA0077.1 0.802
MA0078.1 0.939
MA0079.2 0.192
MA0080.2 1.95156e-8
MA0081.1 0.00122
MA0083.1 0.00325
MA0084.1 0.0761
MA0087.1 0.966
MA0088.1 0.185
MA0090.1 0.00292
MA0091.1 0.0244
MA0092.1 0.179
MA0093.1 0.0612
MA0099.2 2.47738e-6
MA0100.1 0.204
MA0101.1 0.02
MA0102.2 0.4
MA0103.1 0.063
MA0104.2 0.00873
MA0105.1 0.403
MA0106.1 0.317
MA0107.1 0.0225
MA0108.2 0.177
MA0111.1 0.431
MA0112.2 0.0111
MA0113.1 0.573
MA0114.1 0.178
MA0115.1 0.0277
MA0116.1 0.706
MA0117.1 0.0616
MA0119.1 0.0109
MA0122.1 0.107
MA0124.1 0.868
MA0125.1 0.577
MA0131.1 0.937
MA0135.1 0.0689
MA0136.1 8.37152e-12
MA0137.2 0.0139
MA0138.2 0.686
MA0139.1 0.555
MA0140.1 0.00622
MA0141.1 0.94
MA0142.1 0.329
MA0143.1 0.853
MA0144.1 0.472
MA0145.1 0.957
MA0146.1 0.378
MA0147.1 0.0353
MA0148.1 0.176
MA0149.1 0.932
MA0150.1 0.0106
MA0152.1 0.0187
MA0153.1 0.173
MA0154.1 0.975
MA0155.1 0.575
MA0156.1 4.01293e-11
MA0157.1 0.123
MA0159.1 0.722
MA0160.1 0.0687
MA0162.1 0.0244
MA0163.1 0.0479
MA0164.1 0.86
MA0258.1 0.173
MA0259.1 0.452



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13816

Novel motif P-value
1 0.908
10 0.571
100 0.485
101 0.803
102 0.209
103 0.744
104 0.749
105 0.178
106 0.0104
107 0.0124
108 0.18
109 0.771
11 0.456
110 0.54
111 0.904
112 0.404
113 0.634
114 0.252
115 0.139
116 0.0237
117 0.556
118 0.998
119 0.15
12 0.158
120 0.301
121 0.554
122 0.0758
123 0.571
124 0.244
125 0.457
126 0.433
127 0.686
128 0.0654
129 0.53
13 0.962
130 0.252
131 0.421
132 0.0748
133 0.972
134 0.861
135 0.832
136 0.951
137 0.075
138 0.597
139 0.459
14 0.519
140 0.756
141 0.175
142 0.183
143 0.646
144 0.519
145 0.317
146 0.146
147 0.275
148 0.753
149 0.0561
15 0.334
150 0.168
151 0.979
152 0.0464
153 0.522
154 0.917
155 0.484
156 0.477
157 0.391
158 0.187
159 0.773
16 0.0364
160 0.334
161 0.939
162 0.834
163 0.747
164 0.00897
165 0.462
166 0.0255
167 0.717
168 0.571
169 0.024
17 0.423
18 0.426
19 0.00304
2 0.244
20 0.967
21 0.0572
22 0.541
23 0.338
24 0.124
25 0.269
26 0.139
27 0.981
28 0.55
29 0.575
3 0.296
30 0.537
31 0.461
32 7.4432e-23
33 0.568
34 0.878
35 0.775
36 0.135
37 0.145
38 0.508
39 0.346
4 0.312
40 0.466
41 0.324
42 0.703
43 0.729
44 0.264
45 0.811
46 0.279
47 0.924
48 0.588
49 0.8
5 0.821
50 0.497
51 0.701
52 0.666
53 0.656
54 0.365
55 0.0797
56 0.79
57 0.544
58 0.603
59 0.289
6 0.408
60 0.7
61 0.963
62 0.588
63 0.167
64 0.845
65 0.333
66 0.0244
67 0.589
68 0.362
69 0.26
7 0.302
70 0.0676
71 0.363
72 0.26
73 0.0507
74 0.592
75 0.641
76 0.364
77 0.115
78 0.957
79 3.48209e-5
8 0.188
80 0.0457
81 0.899
82 0.0156
83 0.515
84 0.627
85 0.0278
86 0.77
87 0.638
88 0.109
89 0.315
9 0.681
90 0.852
91 0.565
92 0.132
93 0.856
94 0.328
95 0.97
96 0.744
97 0.832
98 0.392
99 0.0125



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs13816


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000197 (receptor cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000098 (sensory epithelial cell)
0002167 (olfactory epithelial cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0200002 (olfactory epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)