FFCP PHASE1:Hg19::chr14:57279899..57279907,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100309464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000534909,NR_029385,uc001xcr.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_OTX2OS1_5end | |||
|id=chr14:57279899..57279907,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;8.59e-07;15!CL:0000125;8.59e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,8.59e-07,15;CL:0000125,8.59e-07,15;CL:0000030,8.59e-07,15;CL:0000339,8.59e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.51e-34;3!UBERON:0006238;5.29e-10;10!UBERON:0006601;2.00e-07;82!CL:0000339;8.59e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.01e-09;11!DOID:5409;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.01e-09,11;DOID:5409,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.49e-30!2;UBERON:0002757!4.49e-30!2;UBERON:0010134!4.49e-30!2;UBERON:0002784!4.49e-30!2;UBERON:0005408!4.49e-30!2;UBERON:0001899!4.49e-30!2;UBERON:0000966!2.35e-26!5;UBERON:0005388!2.35e-26!5;UBERON:0001802!2.35e-26!5;UBERON:0001896!1.27e-19!3;UBERON:0005290!1.27e-19!3;UBERON:0010096!1.27e-19!3;UBERON:0000970!8.71e-18!20;UBERON:0002104!6.08e-17!21;UBERON:0002298!2.40e-16!8;UBERON:0003296!1.44e-15!4;UBERON:0010133!1.44e-15!4;UBERON:0000020!1.79e-15!23;UBERON:0002336!2.38e-15!1;UBERON:0001018!2.38e-15!1;UBERON:0002473!2.38e-15!1;UBERON:0005340!2.38e-15!1;UBERON:0002316!2.38e-15!1;UBERON:0003544!2.38e-15!1;UBERON:0001020!2.38e-15!1;UBERON:0005970!2.38e-15!1;UBERON:0002437!2.38e-15!1;UBERON:0003075!2.80e-15!86;UBERON:0007284!2.80e-15!86;UBERON:0005743!3.72e-15!86;UBERON:0001032!7.85e-15!24;UBERON:0004456!7.85e-15!24;UBERON:0002346!1.46e-14!90;UBERON:0000073!1.18e-13!94;UBERON:0001016!1.18e-13!94;UBERON:0000033!1.33e-12!123;UBERON:0000019!2.84e-12!19;UBERON:0000047!2.84e-12!19;UBERON:0004088!2.84e-12!19;UBERON:0003072!2.84e-12!19;UBERON:0003071!2.84e-12!19;UBERON:0004128!2.84e-12!19;UBERON:0000955!3.95e-12!69;UBERON:0006238!3.95e-12!69;UBERON:0000153!5.68e-12!129;UBERON:0007811!5.68e-12!129;UBERON:0001456!3.94e-11!21;UBERON:0004733!4.14e-11!12;UBERON:0002028!4.14e-11!12;UBERON:0007277!4.14e-11!12;UBERON:0003056!8.52e-11!61;UBERON:0004732!2.67e-10!13;UBERON:0001017!3.85e-10!82;UBERON:0001894!2.69e-09!7;UBERON:0006222!2.69e-09!7;UBERON:0003076!5.30e-09!15;UBERON:0003057!5.30e-09!15;UBERON:0004121!7.98e-09!169;UBERON:0000063!1.30e-08!97;UBERON:0000924!1.35e-08!173;UBERON:0006601!1.35e-08!173;UBERON:0001049!1.54e-08!57;UBERON:0005068!1.54e-08!57;UBERON:0006241!1.54e-08!57;UBERON:0007135!1.54e-08!57;UBERON:0005162!2.48e-08!2;UBERON:0000122!2.48e-08!2;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2;UBERON:0002616!3.04e-08!59;UBERON:0005085!3.97e-08!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;8.13e-21;5!UBERON:0005388;8.13e-21;5!UBERON:0001802;8.13e-21;5!UBERON:0001894;2.47e-15;7!UBERON:0000970;7.97e-12;20!UBERON:0002104;2.70e-11;21!UBERON:0000020;2.26e-10;23!UBERON:0001032;5.74e-10;24!UBERON:0004456;5.74e-10;24!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,1.57e-17,6;UBERON:0005388,1.57e-17,6;UBERON:0001802,1.57e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0000970,2.61e-11,21;UBERON:0002104,2.61e-11,21;UBERON:0000020,5.57e-10,24;UBERON:0001032,5.57e-10,24;UBERON:0004456,5.57e-10,24;UBERON:0001896,1.81e-09,3;UBERON:0005290,1.81e-09,3;UBERON:0010096,1.81e-09,3;UBERON:0000955,4.08e-09,68;UBERON:0006238,4.08e-09,68;UBERON:0003075,1.01e-07,82;UBERON:0007284,1.01e-07,82;UBERON:0001017,1.03e-07,81;UBERON:0002346,2.26e-07,86;UBERON:0001016,5.66e-07,89;UBERON:0003056,7.28e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.0620964029413835,3.73541314327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0710550763486,18.4956047220353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86040500401263,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@OTX2OS1 | |||
}} |
Revision as of 20:16, 11 January 2014
Short description: | p2@OTX2OS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTX2OS1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000534909, NR_029385, uc001xcr.1_5end |
EntrezGene: | OTX2OS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 8.59e-07 | 15 |
glial cell | 8.59e-07 | 15 |
glioblast | 8.59e-07 | 15 |
glioblast (sensu Vertebrata) | 8.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
retina | 1.57e-17 | 6 |
photoreceptor array | 1.57e-17 | 6 |
posterior segment of eyeball | 1.57e-17 | 6 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
eye | 2.61e-11 | 21 |
visual system | 2.61e-11 | 21 |
sense organ | 5.57e-10 | 24 |
sensory system | 5.57e-10 | 24 |
entire sense organ system | 5.57e-10 | 24 |
medulla oblongata | 1.81e-09 | 3 |
myelencephalon | 1.81e-09 | 3 |
future myelencephalon | 1.81e-09 | 3 |
brain | 4.08e-09 | 68 |
future brain | 4.08e-09 | 68 |
neural plate | 1.01e-07 | 82 |
presumptive neural plate | 1.01e-07 | 82 |
central nervous system | 1.03e-07 | 81 |
neurectoderm | 2.26e-07 | 86 |
nervous system | 5.66e-07 | 89 |
pre-chordal neural plate | 7.28e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.01e-09 | 11 |
lung small cell carcinoma | 1.92e-07 | 4 |