FFCP PHASE1:Hg19::chr15:39883769..39883790,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39883769..39883790,+ to FFCP PHASE1:Hg19::chr15:39883769..39883790,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39883769..39883790,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39883769..39883790,+ | |||
|id=chr15:39883769..39883790,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.17e-18!591;CL:0000144!1.26e-16!625;CL:0000055!1.99e-15!180;CL:0002139!1.08e-14!24;CL:0000057!7.71e-14!75;CL:0000548!2.33e-13!679;CL:0000004!2.33e-13!679;CL:0000255!2.33e-13!679;CL:0000012!6.77e-13!682;CL:0000222!9.03e-13!119;CL:0000115!8.15e-12!35;CL:0000071!2.79e-11!18;CL:0002546!2.79e-11!18;CL:0000220!3.01e-11!246;CL:0002321!3.66e-11!248;CL:0002078!1.52e-08!44;CL:0000003!5.33e-08!722;CL:0002620!1.76e-07!23;CL:0000063!2.27e-07!578;CL:0000723!3.53e-07!436;CL:0000680!3.78e-07!57;CL:0000056!3.78e-07!57;CL:0000355!3.78e-07!57;CL:0000213!5.46e-07!57;CL:0000215!5.46e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.26e-15;24!CL:0000071;9.24e-12;18!CL:0002620;3.07e-10;23!CL:0000115;9.92e-10;36!CL:0000197;1.67e-07;6!CL:0000098;1.67e-07;6!CL:0002167;1.67e-07;6!CL:0000057;1.73e-07;73!CL:0002334;4.81e-07;12!CL:0002580;8.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.29e-16,76;CL:0002139,5.88e-15,24;CL:0000071,1.48e-11,18;CL:0002546,1.48e-11,18;CL:0000115,3.58e-11,36;CL:0002620,4.64e-10,23;CL:0002078,6.10e-08,45;CL:0000197,2.14e-07,6;CL:0000098,2.14e-07,6;CL:0002167,2.14e-07,6;CL:0002334,4.28e-07,12;CL:0002580,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;9.24e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.11e-08;5!DOID:450;1.11e-08;5!DOID:66;1.11e-08;5!DOID:423;1.11e-08;5!DOID:0080000;1.11e-08;5!DOID:11722;1.11e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.75e-08,5;DOID:450,1.75e-08,5;DOID:66,1.75e-08,5;DOID:423,1.75e-08,5;DOID:0080000,1.75e-08,5;DOID:11722,1.75e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!4.75e-20!69;UBERON:0001981!1.06e-18!60;UBERON:0007500!1.06e-18!60;UBERON:0004537!1.06e-18!60;UBERON:0006965!1.06e-18!60;UBERON:0002049!3.42e-17!79;UBERON:0007798!3.42e-17!79;UBERON:0004872!3.67e-17!84;UBERON:0003914!1.21e-14!118;UBERON:0001637!5.74e-14!42;UBERON:0003509!5.74e-14!42;UBERON:0004572!5.74e-14!42;UBERON:0004535!2.37e-12!110;UBERON:0000490!5.36e-12!138;UBERON:0001009!2.02e-11!113;UBERON:0001986!2.79e-11!18;UBERON:0004638!2.79e-11!18;UBERON:0004852!2.79e-11!18;UBERON:0004573!1.64e-10!33;UBERON:0004571!1.64e-10!33;UBERON:0000487!1.98e-10!22;UBERON:0002097!8.49e-09!40;UBERON:0000468!1.34e-08!659;UBERON:0000467!2.04e-08!625;UBERON:0000480!2.71e-08!626;UBERON:0006914!3.13e-08!25;UBERON:0000486!5.67e-08!82;UBERON:0002199!6.35e-08!45;UBERON:0002416!6.35e-08!45;UBERON:0000947!1.32e-07!21;UBERON:0010191!1.32e-07!21;UBERON:0003081!1.43e-07!216;UBERON:0000914!1.50e-07!83;UBERON:0002329!1.50e-07!83;UBERON:0003077!1.50e-07!83;UBERON:0003059!1.50e-07!83;UBERON:0007282!1.50e-07!83;UBERON:0009618!1.50e-07!83;UBERON:0007285!1.50e-07!83;UBERON:0003102!1.67e-07!95;UBERON:0004290!3.62e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.24e-12;18!UBERON:0001986;9.24e-12;18!UBERON:0004852;9.24e-12;18!UBERON:0003688;6.88e-11;6!UBERON:0002358;6.88e-11;6!UBERON:0003684;6.88e-11;6!UBERON:0001178;6.88e-11;6!UBERON:0000487;1.58e-10;22!UBERON:0000055;3.09e-10;65!UBERON:0001637;5.77e-10;42!UBERON:0003509;5.77e-10;42!UBERON:0004572;5.77e-10;42!UBERON:0007500;1.39e-09;56!UBERON:0001981;1.39e-09;56!UBERON:0004537;1.39e-09;56!UBERON:0002097;2.44e-09;41!UBERON:0006914;7.59e-09;25!UBERON:0004573;9.29e-09;33!UBERON:0004571;9.29e-09;33!UBERON:0002199;9.93e-08;46!UBERON:0002416;9.93e-08;46!UBERON:0004457;6.70e-07;9!UBERON:0000042;6.70e-07;9!UBERON:0002049;8.70e-07;75!UBERON:0007798;8.70e-07;75!UBERON:0000947;8.74e-07;21!UBERON:0010191;8.74e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.88e-16,68;UBERON:0007500,6.12e-14,59;UBERON:0001981,6.12e-14,59;UBERON:0004537,6.12e-14,59;UBERON:0006965,6.12e-14,59;UBERON:0002049,1.30e-12,78;UBERON:0007798,1.30e-12,78;UBERON:0001637,6.33e-12,42;UBERON:0003509,6.33e-12,42;UBERON:0004572,6.33e-12,42;UBERON:0002097,7.36e-12,41;UBERON:0004638,1.48e-11,18;UBERON:0001986,1.48e-11,18;UBERON:0004852,1.48e-11,18;UBERON:0004872,3.79e-11,83;UBERON:0003688,4.27e-11,6;UBERON:0002358,4.27e-11,6;UBERON:0003684,4.27e-11,6;UBERON:0001178,4.27e-11,6;UBERON:0000487,2.05e-10,22;UBERON:0002199,6.05e-10,46;UBERON:0002416,6.05e-10,46;UBERON:0004573,4.55e-09,33;UBERON:0004571,4.55e-09,33;UBERON:0006914,9.45e-09,25;UBERON:0004535,1.00e-08,109;UBERON:0001009,2.96e-08,112;UBERON:0003914,3.49e-08,117 | |||
|phase1_expression=7.63049192936338,8.34992043174834,2.67813367782345,9.00659685178174,2.68176656656373,13.0850778615055,0,0,0,0.982935746006035,0,1.74753097704138,3.69273769519835,0,0.662794751455832,3.36162573225888,3.01347264011988,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0.802177789880567,0,0,0,0.257575567634187,0.581592955118259,0,0,1.16214518452842,0.411167888021826,0.309706370895104,1.7261543539329,0.512321413058201,0.236482229888585,1.37898272294647,0,0,1.12945403725563,0.545812300115692,0.224723484445085,2.44867113896722,0,0.639337125799041,1.31940520074686,0.398927315243264,0,6.67481248845743,0,0,0.75374599577023,0,0,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.639312809217652,0.361439152384566,1.50401373190767,0.869079113764942,0,1.45990461090791,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,2.47606237746061,2.50793959844173,0.775250277507987,0.35576626268671,2.34304428935269,1.20848795132744,3.80136052859256,1.46437234528902,1.10298924103761,4.0507097394088,1.42879565254528,0.898117490504679,0.788280363383256,1.53316637465883,2.84779697870439,2.01521918323448,0,0,0,8.44852317882041,2.65924074495618,2.64818361626438,1.14734648299525,1.06400514659507,0,2.1349799145941,1.97334038733728,0.622422070799533,0.67355336034844,0.490385709340376,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,1.18800285728205,4.94533858557114,0,0,0,0,0.277064115484183,0,5.51678032438235,2.10333282469236,0.567160915800105,4.84352016359927,2.56268866582281,3.39091041855299,3.00091096084402,1.03052529238439,2.57640540045629,1.30281799432113,2.02531598689519,1.75386609290158,1.26216887122057,1.47279837827679,1.2931684545505,3.55009592516614,0.906768884048762,1.01736355386293,0.57978255948989,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0,0,0,4.69348596989448,8.36213219650751,2.76269842704961,3.25057549622385,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.171567810298526,0.768251997860379,1.1240175325762,0.603173834469785,0.370353780634118,0,2.07986957055916,0,0,0.117408694235822,2.16549671641611,4.62985512576611,5.89787871927255,0,0,0,0,0,0,1.6798212819886,0.141775097242386,0.447792613514241,0,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,1.19812427745791,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,4.36738809214695,10.5273103390325,4.25796520591624,3.04567678981054,0.601892199455438,0,2.0694614258501,0.664225598535437,0.368738337083406,2.34585759063824,0,0,0,0,0,0,0,0.604780586659361,5.21026396419431,11.3561860233166,10.9457436828899,2.94720043288112,7.16390148693385,9.00781958404202,4.45254199334973,0.462629081407967,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,2.80709058424599,0.0920809889358963,1.14814448164607,0,0.393373244878272,0,0,0,0,0,2.27466768141793,0.680374821106063,0.863663664408557,6.16909010761157,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,2.60024098414608,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,1.15699440752685,0.192190067365106,1.53135254993501,0.30347334256665,0.464845549297286,1.88887408098384,0,0.308033580176089,0.532306030317022,0,1.11194531462352,0.715624433709956,0,0,0,0,0,0,1.56989728039846,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0.421258456238981,0,0.487426979262569,2.11300293513511,0.545999645631943,0.707027159768564,0,0,1.32687795048244,3.06915619677634,0,0.655894752046633,1.82619339266434,2.78841148289775,0.845086807596724,0.143411352204052,0.294747123039363,1.78335525740625,0,0,0,0.379473173765715,0,0.577332676353072,1.34060455107157,0,0.188287601553558,1.29151611801369,1.68471475667626,1.7737206141467,1.83778720165568,0,0,0.569647187174163,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,2.86493381685228,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0,7.77598969154519,0.539210106883961,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.341826167541004,0,0,0,1.27600463892768,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr15:39883769..39883790,+ | |||
}} | }} |
Latest revision as of 01:18, 25 July 2015
Short description: | p@chr15:39883769..39883790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39883769..39883790, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.29e-16 | 76 |
endothelial cell of vascular tree | 5.88e-15 | 24 |
blood vessel endothelial cell | 1.48e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.48e-11 | 18 |
endothelial cell | 3.58e-11 | 36 |
skin fibroblast | 4.64e-10 | 23 |
meso-epithelial cell | 6.10e-08 | 45 |
receptor cell | 2.14e-07 | 6 |
sensory epithelial cell | 2.14e-07 | 6 |
olfactory epithelial cell | 2.14e-07 | 6 |
preadipocyte | 4.28e-07 | 12 |
preadipocyte of the breast | 8.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 7.88e-16 | 68 |
epithelial tube open at both ends | 6.12e-14 | 59 |
blood vessel | 6.12e-14 | 59 |
blood vasculature | 6.12e-14 | 59 |
vascular cord | 6.12e-14 | 59 |
vasculature | 1.30e-12 | 78 |
vascular system | 1.30e-12 | 78 |
artery | 6.33e-12 | 42 |
arterial blood vessel | 6.33e-12 | 42 |
arterial system | 6.33e-12 | 42 |
skin of body | 7.36e-12 | 41 |
blood vessel endothelium | 1.48e-11 | 18 |
endothelium | 1.48e-11 | 18 |
cardiovascular system endothelium | 1.48e-11 | 18 |
splanchnic layer of lateral plate mesoderm | 3.79e-11 | 83 |
omentum | 4.27e-11 | 6 |
peritoneum | 4.27e-11 | 6 |
abdominal cavity | 4.27e-11 | 6 |
visceral peritoneum | 4.27e-11 | 6 |
simple squamous epithelium | 2.05e-10 | 22 |
integument | 6.05e-10 | 46 |
integumental system | 6.05e-10 | 46 |
systemic artery | 4.55e-09 | 33 |
systemic arterial system | 4.55e-09 | 33 |
squamous epithelium | 9.45e-09 | 25 |
cardiovascular system | 1.00e-08 | 109 |
circulatory system | 2.96e-08 | 112 |
epithelial tube | 3.49e-08 | 117 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.75e-08 | 5 |
myotonic disease | 1.75e-08 | 5 |
muscle tissue disease | 1.75e-08 | 5 |
myopathy | 1.75e-08 | 5 |
muscular disease | 1.75e-08 | 5 |
myotonic dystrophy | 1.75e-08 | 5 |