FFCP PHASE1:Hg19::chr15:39887702..39887713,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39887702..39887713,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39887702..39887713,+ | |description=CAGE_peak_at_chr15:39887702..39887713,+ | ||
|id=chr15:39887702..39887713,+ | |id=chr15:39887702..39887713,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.82e-18!75;CL:0002371!1.76e-14!591;CL:0000055!2.32e-14!180;CL:0000144!4.65e-13!625;CL:0002139!2.04e-12!24;CL:0000548!4.08e-10!679;CL:0000004!4.08e-10!679;CL:0000255!4.08e-10!679;CL:0000115!6.14e-10!35;CL:0000222!7.23e-10!119;CL:0000012!9.42e-10!682;CL:0002334!6.32e-09!12;CL:0000071!1.78e-08!18;CL:0002546!1.78e-08!18;CL:0000213!2.98e-08!57;CL:0000215!2.98e-08!57;CL:0002620!4.67e-08!23;CL:0002078!2.03e-07!44;CL:0000063!3.27e-07!578;CL:0000723!3.30e-07!436;CL:0000048!5.29e-07!430;CL:1000413!9.28e-07!9 | |ontology_enrichment_celltype=CL:0000057!5.82e-18!75;CL:0002371!1.76e-14!591;CL:0000055!2.32e-14!180;CL:0000144!4.65e-13!625;CL:0002139!2.04e-12!24;CL:0000548!4.08e-10!679;CL:0000004!4.08e-10!679;CL:0000255!4.08e-10!679;CL:0000115!6.14e-10!35;CL:0000222!7.23e-10!119;CL:0000012!9.42e-10!682;CL:0002334!6.32e-09!12;CL:0000071!1.78e-08!18;CL:0002546!1.78e-08!18;CL:0000213!2.98e-08!57;CL:0000215!2.98e-08!57;CL:0002620!4.67e-08!23;CL:0002078!2.03e-07!44;CL:0000063!3.27e-07!578;CL:0000723!3.30e-07!436;CL:0000048!5.29e-07!430;CL:1000413!9.28e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.14e-11;24!CL:0002334;9.42e-10;12!CL:0002559;1.21e-09;5!CL:0002620;1.47e-09;23!CL:0000057;2.35e-08;73!CL:0002138;5.90e-08;6!CL:0000115;7.64e-08;36!CL:0002580;1.98e-07;3!CL:0002615;3.41e-07;3!CL:0002579;5.87e-07;3!CL:0000346;7.67e-07;3!CL:1000428;7.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.41e-20,76;CL:0002139,9.09e-12,24;CL:0002559,7.08e-10,5;CL:0002334,8.37e-10,12;CL:0002620,2.02e-09,23;CL:0000115,3.25e-09,36;CL:0005020,7.48e-08,6;CL:0002138,7.48e-08,6;CL:0005022,7.48e-08,6;CL:0002580,1.80e-07,3;CL:0002615,3.33e-07,3;CL:0002579,3.46e-07,3;CL:0000346,8.01e-07,3;CL:1000428,8.01e-07,3;CL:1000413,9.59e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;5.90e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.26e-15!69;UBERON:0004872!9.06e-14!84;UBERON:0001981!4.15e-12!60;UBERON:0007500!4.15e-12!60;UBERON:0004537!4.15e-12!60;UBERON:0006965!4.15e-12!60;UBERON:0002049!4.89e-12!79;UBERON:0007798!4.89e-12!79;UBERON:0001009!2.05e-10!113;UBERON:0004535!3.27e-10!110;UBERON:0001637!5.29e-09!42;UBERON:0003509!5.29e-09!42;UBERON:0004572!5.29e-09!42;UBERON:0002199!6.37e-09!45;UBERON:0002416!6.37e-09!45;UBERON:0005631!7.04e-09!14;UBERON:0000158!7.04e-09!14;UBERON:0002097!1.55e-08!40;UBERON:0001986!1.78e-08!18;UBERON:0004638!1.78e-08!18;UBERON:0004852!1.78e-08!18;UBERON:0004923!3.10e-08!57;UBERON:0000487!4.51e-08!22;UBERON:0000468!1.03e-07!659;UBERON:0003914!2.29e-07!118;UBERON:0006914!3.15e-07!25;UBERON:0000467!4.30e-07!625;UBERON:0000480!5.42e-07!626;UBERON:0003102!5.72e-07!95;UBERON:0003688!8.53e-07!6;UBERON:0002358!8.53e-07!6;UBERON:0003684!8.53e-07!6;UBERON:0001178!8.53e-07!6;UBERON:0003915!9.28e-07!9;UBERON:0004700!9.28e-07!9;UBERON:0001917!9.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.68e-12;6!UBERON:0002358;1.68e-12;6!UBERON:0003684;1.68e-12;6!UBERON:0001178;1.68e-12;6!UBERON:0002073;1.21e-09;5!UBERON:0001473;4.50e-08;8!UBERON:0004536;4.50e-08;8!UBERON:0006558;4.50e-08;8!UBERON:0004457;5.27e-08;9!UBERON:0000042;5.27e-08;9!UBERON:0002097;5.79e-08;41!UBERON:0001637;5.46e-07;42!UBERON:0003509;5.46e-07;42!UBERON:0004572;5.46e-07;42!UBERON:0000947;5.99e-07;21!UBERON:0010191;5.99e-07;21!UBERON:0000412;7.67e-07;3!UBERON:0001992;7.67e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.74e-13,6;UBERON:0002358,9.74e-13,6;UBERON:0003684,9.74e-13,6;UBERON:0001178,9.74e-13,6;UBERON:0000055,3.62e-11,68;UBERON:0002097,1.63e-10,41;UBERON:0002073,7.08e-10,5;UBERON:0005086,7.08e-10,5;UBERON:0002049,6.85e-09,78;UBERON:0007798,6.85e-09,78;UBERON:0002199,7.21e-09,46;UBERON:0002416,7.21e-09,46;UBERON:0004923,3.71e-08,66;UBERON:0001473,4.00e-08,8;UBERON:0004536,4.00e-08,8;UBERON:0006558,4.00e-08,8;UBERON:0004872,7.95e-08,83;UBERON:0001637,2.66e-07,42;UBERON:0003509,2.66e-07,42;UBERON:0004572,2.66e-07,42;UBERON:0007500,3.33e-07,59;UBERON:0001981,3.33e-07,59;UBERON:0004537,3.33e-07,59;UBERON:0006965,3.33e-07,59;UBERON:0000947,5.26e-07,21;UBERON:0010191,5.26e-07,21;UBERON:0000412,8.01e-07,3;UBERON:0001992,8.01e-07,3;UBERON:0003915,9.59e-07,9;UBERON:0004700,9.59e-07,9;UBERON:0001917,9.59e-07,9 | |||
|phase1_expression=5.08699461957559,6.85121676451146,2.67813367782345,9.00659685178174,2.23480547213644,5.23403114460221,0,0.631719873426831,0,0.491467873003018,0,1.09220686065086,1.84636884759917,0.123766352960047,0,1.34465029290355,1.20538905604795,2.19093027116212,0,0,0,0.313454721478088,0,0,0.753255837568817,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0.145398238779565,0,0,1.16214518452842,0,0,0.863077176966451,0,0.236482229888585,1.37898272294647,0,0,0.941211697713023,0.272906150057846,0,1.53041946185451,0,0,0.329851300186716,0,0,3.48251086354301,0.56738522469114,0,1.00499466102697,0,0,1.81619850790011,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.50668955317945,0.144846518960824,0.795285947051099,2.43317435151318,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.73570250803797,1.13061588384802,0.419499436209906,1.10047216776027,1.46296476575767,1.29208379584664,0.71153252537342,1.33888245105868,1.20848795132744,1.52054421143703,1.95249646038536,1.83831540172934,2.43042584364528,0.982297011124877,0.673588117878509,0.112611480483322,0,0,0.732806975721629,0,0,0,6.95760732373446,2.15271869829786,0.662045904066094,1.72101972449288,0.354668382198357,0,1.06748995729705,2.71334303258876,1.24484414159907,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.408308342509787,0,0.206651562351531,1.18800285728205,4.94533858557114,1.82032272387605,0,0,0,0.831192346452549,0.438977620880838,3.67785354958824,1.80285670687916,0.113432183160021,4.48474089222155,2.77624605464138,1.27159140695737,0.600182192168805,1.23663035086127,3.09168648054755,2.60563598864226,2.86919764810153,0.779496041289589,1.00973509697646,2.02509777013059,1.45481451136931,2.13005755509969,0.403008392910561,1.52604533079439,0.57978255948989,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0,0,0,3.12899064659632,4.5026865673502,1.38134921352481,1.85747171212792,1.44375896333917,0,0,0.482022059766964,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0,0.768251997860379,0,0.402115889646523,0.185176890317059,0,0,0,0,0,1.44366447761074,4.1668696131895,3.04406643575357,0,0,0,0,0,0.93733833986777,1.34385702559088,0.425325291727159,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.517086863031111,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,1.64648067356154,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.99130067673937,7.31558854068363,3.6271555457805,1.63997980989798,0.601892199455438,0,0,0,0.553107505625109,1.12948698808508,0,0,0,0.215714200818617,0.320182673410333,0.909382714338778,1.66435439510497,1.5119514666484,2.72918588600655,7.366174717827,5.05188169979532,1.92208723883551,4.09365799253363,5.14732547659544,1.48418066444991,0.925258162815933,0.887808626565635,0.0821271560138091,1.03850885836724,0.116210378459959,0,2.20557117333613,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,1.13733384070897,0.170093705276516,0.863663664408557,6.16909010761157,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,1.30012049207304,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0.178064071293475,0.826424576804891,0,0.510450849978337,0,0,2.51849877464512,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0.719489830333259,0,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,1.1312434556297,0,0,4.64407282668854,2.19225442626881,0,0,0.811641507850816,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,1.07001315444375,0,0.422215270595328,0,0,0,0.577332676353072,0,0,0,2.58303223602738,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,3.07160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0.539210106883961,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0.638002319463839,1.00757352742049,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,1.11712960508902,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,2.88239906833923,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788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| ||
|short_description=p@chr15:39887702..39887713,+ | |short_description=p@chr15:39887702..39887713,+ | ||
}} | }} |
Latest revision as of 01:20, 25 July 2015
Short description: | p@chr15:39887702..39887713, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39887702..39887713, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.41e-20 | 76 |
endothelial cell of vascular tree | 9.09e-12 | 24 |
hair follicle cell | 7.08e-10 | 5 |
preadipocyte | 8.37e-10 | 12 |
skin fibroblast | 2.02e-09 | 23 |
endothelial cell | 3.25e-09 | 36 |
lymphangioblast | 7.48e-08 | 6 |
endothelial cell of lymphatic vessel | 7.48e-08 | 6 |
vascular lymphangioblast | 7.48e-08 | 6 |
preadipocyte of the breast | 1.80e-07 | 3 |
adipocyte of omentum tissue | 3.33e-07 | 3 |
omentum preadipocyte | 3.46e-07 | 3 |
hair follicle dermal papilla cell | 8.01e-07 | 3 |
stem cell of epidermis | 8.01e-07 | 3 |
endothelial cell of artery | 9.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.74e-13 | 6 |
peritoneum | 9.74e-13 | 6 |
abdominal cavity | 9.74e-13 | 6 |
visceral peritoneum | 9.74e-13 | 6 |
vessel | 3.62e-11 | 68 |
skin of body | 1.63e-10 | 41 |
hair follicle | 7.08e-10 | 5 |
hair follicle placode | 7.08e-10 | 5 |
vasculature | 6.85e-09 | 78 |
vascular system | 6.85e-09 | 78 |
integument | 7.21e-09 | 46 |
integumental system | 7.21e-09 | 46 |
organ component layer | 3.71e-08 | 66 |
lymphatic vessel | 4.00e-08 | 8 |
lymph vasculature | 4.00e-08 | 8 |
lymphatic part of lymphoid system | 4.00e-08 | 8 |
splanchnic layer of lateral plate mesoderm | 7.95e-08 | 83 |
artery | 2.66e-07 | 42 |
arterial blood vessel | 2.66e-07 | 42 |
arterial system | 2.66e-07 | 42 |
epithelial tube open at both ends | 3.33e-07 | 59 |
blood vessel | 3.33e-07 | 59 |
blood vasculature | 3.33e-07 | 59 |
vascular cord | 3.33e-07 | 59 |
aorta | 5.26e-07 | 21 |
aortic system | 5.26e-07 | 21 |
dermal papilla | 8.01e-07 | 3 |
papillary layer of dermis | 8.01e-07 | 3 |
endothelial tube | 9.59e-07 | 9 |
arterial system endothelium | 9.59e-07 | 9 |
endothelium of artery | 9.59e-07 | 9 |