FFCP PHASE1:Hg19::chr16:82671490..82671521,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr16:82671490..82671521,+ | |||
|id=chr16:82671490..82671521,+ | |||
|ontology_enrichment_celltype=CL:0002621!6.14e-20!3;CL:0002159!1.07e-11!13;CL:0002077!1.48e-10!33;CL:0002251!1.63e-10!21;CL:0000240!9.54e-10!6;CL:0000311!9.54e-10!6;CL:0000079!9.54e-10!6;CL:0000237!9.54e-10!6;CL:0000036!9.54e-10!6;CL:0000357!9.54e-10!6;CL:0000114!9.54e-10!6;CL:0002166!2.24e-09!3;CL:0000064!1.09e-08!3;CL:0005012!1.09e-08!3;CL:0000067!1.09e-08!3;CL:0002304!1.09e-08!3;CL:0000221!5.76e-08!71;CL:0002336!8.00e-08!1;CL:0002261!8.00e-08!1;CL:0002170!8.00e-08!1;CL:1001319!1.18e-07!1;CL:1000600!1.18e-07!1;CL:0000066!2.96e-07!254;CL:0000076!9.93e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002621;3.76e-66;3!CL:0002251;2.06e-39;20!CL:0002336;3.67e-23;1!CL:0002261;3.67e-23;1!CL:0002170;3.67e-23;1!CL:0002076;3.95e-16;42!CL:0000575;2.74e-12;2!CL:0002166;1.26e-08;3!CL:0000076;3.08e-07;63!CL:0002159;3.23e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.71e-66,3;CL:0002251,1.69e-39,20;CL:0002336,2.10e-23,1;CL:0002261,2.10e-23,1;CL:0002170,2.10e-23,1;CL:0002076,6.62e-19,42;CL:0000223,1.04e-13,58;CL:0000575,3.62e-12,2;CL:0000076,6.00e-09,63;CL:0002166,1.30e-08,3;CL:0002159,3.55e-07,14;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2!CL:0000223;1.48e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!2.93e-11!14;DOID:4556!2.87e-09!3;DOID:3151!1.72e-07!1;DOID:3149!1.72e-07!1;DOID:0060085!2.35e-07!1;DOID:3165!2.35e-07!1;DOID:0060121!2.35e-07!1;DOID:2438!2.35e-07!1;DOID:4418!2.35e-07!1;DOID:4235!2.66e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.22e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.79e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001949!6.14e-20!3;UBERON:0003729!3.07e-12!5;UBERON:0001444!4.18e-09!48;UBERON:0000344!9.69e-09!12;UBERON:0001778!1.09e-08!3;UBERON:0001775!1.09e-08!3;UBERON:0003102!1.68e-08!95;UBERON:0001828!8.97e-08!8;UBERON:0000165!9.83e-08!28;UBERON:0000930!9.83e-08!28;UBERON:0004645!1.18e-07!1;UBERON:0001256!1.18e-07!1;UBERON:0001259!1.18e-07!1;UBERON:0000997!1.33e-07!1;UBERON:0005056!1.33e-07!1;UBERON:0000166!1.84e-07!21;UBERON:0002146!2.07e-07!1;UBERON:0005623!2.07e-07!1;UBERON:0003343!2.14e-07!4;UBERON:0004785!2.14e-07!4;UBERON:0001708!3.11e-07!4;UBERON:0001704!3.11e-07!4;UBERON:0000014!5.22e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.76e-66;3!UBERON:0003729;1.84e-60;13!UBERON:0000344;2.06e-39;20!UBERON:0000161;4.43e-29;19!UBERON:0000166;4.43e-29;19!UBERON:0003929;6.82e-29;7!UBERON:0000165;3.21e-28;28!UBERON:0003350;2.18e-25;8!UBERON:0001828;2.18e-25;8!UBERON:0003343;5.43e-23;4!UBERON:0004785;5.43e-23;4!UBERON:0000486;3.43e-17;12!UBERON:0001444;4.69e-16;48!UBERON:0007811;6.74e-16;52!UBERON:0000974;1.09e-15;6!UBERON:0000033;3.23e-15;50!UBERON:0004923;1.55e-12;55!UBERON:0000153;8.73e-12;54!UBERON:0001555;1.27e-10;54!UBERON:0004807;1.09e-09;22!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0010371;2.90e-07;31!UBERON:0001007;3.73e-07;81!UBERON:0001708;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4!UBERON:0008895;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.71e-66,3;UBERON:0003729,1.35e-60,13;UBERON:0000344,1.69e-39,20;UBERON:0000165,2.59e-27,29;UBERON:0000930,2.59e-27,29;UBERON:0003350,2.37e-25,8;UBERON:0001828,2.37e-25,8;UBERON:0000166,3.56e-25,22;UBERON:0000033,7.24e-25,56;UBERON:0003343,4.60e-23,4;UBERON:0004785,4.60e-23,4;UBERON:0000153,1.86e-22,62;UBERON:0007811,1.86e-22,62;UBERON:0001444,7.53e-22,49;UBERON:0000161,1.69e-15,36;UBERON:0003102,5.12e-14,99;UBERON:0004923,4.74e-12,66;UBERON:0000974,7.74e-10,10;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0004807,9.88e-08,28;UBERON:0001004,1.28e-07,74;UBERON:0001708,9.11e-07,4;UBERON:0008895,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,3.81844568827169,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,1.73288499225507,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,20.1150076877944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:82671490..82671521,+ | |||
}} |
Revision as of 12:29, 20 January 2014
Short description: | p@chr16:82671490..82671521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:82671490..82671521, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.71e-66 | 3 |
epithelial cell of alimentary canal | 1.69e-39 | 20 |
buccal mucosa cell | 2.10e-23 | 1 |
endothelial cell of viscerocranial mucosa | 2.10e-23 | 1 |
keratinized cell of the oral mucosa | 2.10e-23 | 1 |
endo-epithelial cell | 6.62e-19 | 42 |
endodermal cell | 1.04e-13 | 58 |
corneal epithelial cell | 3.62e-12 | 2 |
squamous epithelial cell | 6.00e-09 | 63 |
epithelial cell of Malassez | 1.30e-08 | 3 |
general ecto-epithelial cell | 3.55e-07 | 14 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.71e-66 | 3 |
mouth mucosa | 1.35e-60 | 13 |
mucosa | 1.69e-39 | 20 |
mouth | 2.59e-27 | 29 |
stomodeum | 2.59e-27 | 29 |
epithelium of mucosa | 2.37e-25 | 8 |
gingiva | 2.37e-25 | 8 |
oral opening | 3.56e-25 | 22 |
head | 7.24e-25 | 56 |
mucosa of oral region | 4.60e-23 | 4 |
respiratory system mucosa | 4.60e-23 | 4 |
anterior region of body | 1.86e-22 | 62 |
craniocervical region | 1.86e-22 | 62 |
subdivision of head | 7.53e-22 | 49 |
orifice | 1.69e-15 | 36 |
surface structure | 5.12e-14 | 99 |
organ component layer | 4.74e-12 | 66 |
neck | 7.74e-10 | 10 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |
respiratory system epithelium | 9.88e-08 | 28 |
respiratory system | 1.28e-07 | 74 |
jaw skeleton | 9.11e-07 | 4 |
splanchnocranium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.79e-15 | 14 |