FFCP PHASE1:Hg19::chr17:36665842..36665867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:36665842..36665867,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr17:36665842..36665867,+ | |description=CAGE_peak_at_chr17:36665842..36665867,+ | ||
|id=chr17:36665842..36665867,+ | |id=chr17:36665842..36665867,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.55e-08;5!CL:0000163;3.53e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-08,5;CL:0002028,2.23e-08,5;CL:0000163,4.60e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.28e-14;3!UBERON:0006601;1.90e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.25e-07;14!DOID:169;2.05e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.28e-07,14;DOID:169,2.44e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-39!94;UBERON:0001016!1.20e-39!94;UBERON:0001049!1.66e-39!57;UBERON:0005068!1.66e-39!57;UBERON:0006241!1.66e-39!57;UBERON:0007135!1.66e-39!57;UBERON:0005743!2.70e-37!86;UBERON:0001017!4.91e-36!82;UBERON:0002616!1.41e-33!59;UBERON:0000955!2.47e-32!69;UBERON:0006238!2.47e-32!69;UBERON:0002619!3.16e-32!22;UBERON:0001950!3.62e-32!20;UBERON:0001893!2.71e-30!34;UBERON:0002020!3.31e-30!34;UBERON:0003528!3.31e-30!34;UBERON:0001869!4.27e-30!32;UBERON:0002780!1.09e-28!41;UBERON:0001890!1.09e-28!41;UBERON:0006240!1.09e-28!41;UBERON:0002791!1.13e-28!33;UBERON:0003075!2.12e-28!86;UBERON:0007284!2.12e-28!86;UBERON:0003080!8.15e-28!42;UBERON:0000956!9.60e-28!25;UBERON:0000203!9.60e-28!25;UBERON:0002346!1.40e-26!90;UBERON:0003056!4.23e-21!61;UBERON:0004121!1.43e-17!169;UBERON:0000033!3.13e-17!123;UBERON:0000924!7.80e-17!173;UBERON:0006601!7.80e-17!173;UBERON:0000153!7.09e-16!129;UBERON:0007811!7.09e-16!129;UBERON:0007023!6.87e-15!115;UBERON:0003076!1.18e-12!15;UBERON:0003057!1.18e-12!15;UBERON:0001871!1.26e-12!7;UBERON:0000200!1.79e-12!6;UBERON:0004733!4.82e-11!12;UBERON:0002028!4.82e-11!12;UBERON:0007277!4.82e-11!12;UBERON:0002021!3.35e-10!5;UBERON:0004732!4.79e-10!13;UBERON:0002680!9.26e-10!9;UBERON:0001895!9.26e-10!9;UBERON:0010092!9.26e-10!9;UBERON:0000025!1.94e-08!194;UBERON:0000349!4.03e-07!5;UBERON:0001872!4.29e-07!5;UBERON:0002771!5.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.80e-58;22!UBERON:0001950;2.63e-57;20!UBERON:0000956;4.69e-51;25!UBERON:0000203;4.69e-51;25!UBERON:0001869;5.65e-43;32!UBERON:0001893;1.23e-39;34!UBERON:0002791;3.36e-39;32!UBERON:0003528;2.22e-37;34!UBERON:0002020;2.22e-37;34!UBERON:0002780;3.48e-32;41!UBERON:0001890;3.48e-32;41!UBERON:0000073;4.55e-27;53!UBERON:0002616;4.55e-27;53!UBERON:0000200;1.15e-25;6!UBERON:0001871;8.82e-23;6!UBERON:0000955;1.97e-20;68!UBERON:0001016;6.51e-16;83!UBERON:0001017;1.21e-15;75!UBERON:0001872;3.00e-14;5!UBERON:0000349;3.05e-14;5!UBERON:0001870;3.84e-14;3!UBERON:0001905;3.26e-10;2!UBERON:0002757;3.26e-10;2!UBERON:0010134;3.26e-10;2!UBERON:0005408;3.26e-10;2!UBERON:0001899;3.26e-10;2!UBERON:0001876;4.58e-10;2!UBERON:0002702;5.74e-10;2!UBERON:0002771;9.58e-10;2!UBERON:0002021;1.59e-08;5!UBERON:0002037;2.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.45e-58,22;UBERON:0001950,1.97e-57,20;UBERON:0000956,2.63e-51,25;UBERON:0000203,2.63e-51,25;UBERON:0001869,6.37e-49,32;UBERON:0002780,5.89e-46,41;UBERON:0001890,5.89e-46,41;UBERON:0003080,5.89e-46,41;UBERON:0006240,5.89e-46,41;UBERON:0001893,7.53e-46,34;UBERON:0000073,1.29e-45,53;UBERON:0002616,1.29e-45,53;UBERON:0002791,5.00e-44,32;UBERON:0001049,6.74e-43,56;UBERON:0005068,6.74e-43,56;UBERON:0006241,6.74e-43,56;UBERON:0007135,6.74e-43,56;UBERON:0001016,2.99e-42,89;UBERON:0001017,2.60e-41,81;UBERON:0003528,3.00e-41,34;UBERON:0002020,3.00e-41,34;UBERON:0000955,5.86e-40,68;UBERON:0006238,5.86e-40,68;UBERON:0003056,2.07e-29,61;UBERON:0003075,1.41e-27,82;UBERON:0007284,1.41e-27,82;UBERON:0002346,4.93e-26,86;UBERON:0000200,7.96e-26,6;UBERON:0001871,9.58e-23,6;UBERON:0010371,1.50e-20,104;UBERON:0004121,6.79e-19,171;UBERON:0000924,6.79e-19,171;UBERON:0006601,6.79e-19,171;UBERON:0011216,1.58e-17,223;UBERON:0010314,1.94e-16,132;UBERON:0007023,2.04e-16,114;UBERON:0000349,2.01e-14,5;UBERON:0001872,2.32e-14,5;UBERON:0001870,2.63e-14,3;UBERON:0000025,1.84e-10,192;UBERON:0001905,3.06e-10,2;UBERON:0002757,3.06e-10,2;UBERON:0010134,3.06e-10,2;UBERON:0005408,3.06e-10,2;UBERON:0001899,3.06e-10,2;UBERON:0001876,3.35e-10,2;UBERON:0002702,3.83e-10,2;UBERON:0002771,1.22e-09,2;UBERON:0002021,2.01e-08,5;UBERON:0002037,2.39e-07,6;UBERON:0006215,2.39e-07,6;UBERON:0004111,3.40e-07,240 | |||
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| ||
|short_description=p@chr17:36665842..36665867,+ | |short_description=p@chr17:36665842..36665867,+ | ||
}} | }} |
Latest revision as of 15:56, 25 July 2015
Short description: | p@chr17:36665842..36665867, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36665842..36665867, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mast cell | 2.23e-08 | 5 |
basophil mast progenitor cell | 2.23e-08 | 5 |
endocrine cell | 4.60e-08 | 9 |
Ontology term | p-value | n |
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gastrointestinal system cancer | 1.28e-07 | 14 |
neuroendocrine tumor | 2.44e-07 | 6 |