FFCP PHASE1:Hg19::chr17:48263814..48263827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48263814..48263827,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48263814..48263827,+ | |description=CAGE_peak_at_chr17:48263814..48263827,+ | ||
|id=chr17:48263814..48263827,+ | |id=chr17:48263814..48263827,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.60e-32!180;CL:0000057!1.97e-22!75;CL:0000048!5.36e-13!430;CL:0000183!1.09e-12!59;CL:0000680!2.42e-12!57;CL:0000056!2.42e-12!57;CL:0000355!2.42e-12!57;CL:0000723!3.01e-12!436;CL:0000187!9.74e-12!54;CL:0000034!2.71e-11!444;CL:0002334!2.80e-11!12;CL:0002620!8.65e-11!23;CL:0000192!6.50e-10!42;CL:0000514!6.50e-10!42;CL:0000393!1.69e-09!60;CL:0000211!1.69e-09!60;CL:0002371!7.68e-09!591;CL:0000144!8.26e-08!625;CL:0000499!1.05e-07!27;CL:0002320!1.34e-07!365 | |ontology_enrichment_celltype=CL:0000055!5.60e-32!180;CL:0000057!1.97e-22!75;CL:0000048!5.36e-13!430;CL:0000183!1.09e-12!59;CL:0000680!2.42e-12!57;CL:0000056!2.42e-12!57;CL:0000355!2.42e-12!57;CL:0000723!3.01e-12!436;CL:0000187!9.74e-12!54;CL:0000034!2.71e-11!444;CL:0002334!2.80e-11!12;CL:0002620!8.65e-11!23;CL:0000192!6.50e-10!42;CL:0000514!6.50e-10!42;CL:0000393!1.69e-09!60;CL:0000211!1.69e-09!60;CL:0002371!7.68e-09!591;CL:0000144!8.26e-08!625;CL:0000499!1.05e-07!27;CL:0002320!1.34e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.47e-18;12!CL:0000135;3.83e-08;3!CL:0000388;3.83e-08;3!CL:0002579;3.76e-07;3!CL:0002580;4.13e-07;3!CL:0000499;6.05e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.13e-19,76;CL:0002334,3.12e-18,12;CL:0000048,1.53e-08,427;CL:0000723,3.49e-08,433;CL:0000135,4.04e-08,3;CL:0000388,4.04e-08,3;CL:0000034,1.00e-07,441;CL:0002320,1.48e-07,361;CL:0000134,4.54e-07,354;CL:0002580,5.12e-07,3;CL:0002579,5.23e-07,3;CL:0000499,5.28e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.27e-14!83;UBERON:0002329!1.27e-14!83;UBERON:0003077!1.27e-14!83;UBERON:0003059!1.27e-14!83;UBERON:0007282!1.27e-14!83;UBERON:0009618!1.27e-14!83;UBERON:0007285!1.27e-14!83;UBERON:0004290!2.46e-13!70;UBERON:0001134!6.05e-13!61;UBERON:0002036!6.05e-13!61;UBERON:0003082!6.05e-13!61;UBERON:0002385!7.27e-13!63;UBERON:0001015!7.27e-13!63;UBERON:0000383!7.27e-13!63;UBERON:0000486!3.83e-11!82;UBERON:0005256!4.78e-09!143;UBERON:0002100!7.05e-08!216;UBERON:0002384!9.43e-08!375;UBERON:0002200!4.18e-07!11;UBERON:0006876!4.18e-07!11 | |ontology_enrichment_uberon=UBERON:0000914!1.27e-14!83;UBERON:0002329!1.27e-14!83;UBERON:0003077!1.27e-14!83;UBERON:0003059!1.27e-14!83;UBERON:0007282!1.27e-14!83;UBERON:0009618!1.27e-14!83;UBERON:0007285!1.27e-14!83;UBERON:0004290!2.46e-13!70;UBERON:0001134!6.05e-13!61;UBERON:0002036!6.05e-13!61;UBERON:0003082!6.05e-13!61;UBERON:0002385!7.27e-13!63;UBERON:0001015!7.27e-13!63;UBERON:0000383!7.27e-13!63;UBERON:0000486!3.83e-11!82;UBERON:0005256!4.78e-09!143;UBERON:0002100!7.05e-08!216;UBERON:0002384!9.43e-08!375;UBERON:0002200!4.18e-07!11;UBERON:0006876!4.18e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.92e-11;9!UBERON:0000042;9.92e-11;9!UBERON:0003688;8.41e-09;6!UBERON:0002358;8.41e-09;6!UBERON:0003684;8.41e-09;6!UBERON:0001178;8.41e-09;6!UBERON:0007846;3.83e-08;3!UBERON:0000043;3.83e-08;3!UBERON:0007845;3.83e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.80e-08,6;UBERON:0002358,1.80e-08,6;UBERON:0003684,1.80e-08,6;UBERON:0001178,1.80e-08,6;UBERON:0007846,4.04e-08,3;UBERON:0000043,4.04e-08,3;UBERON:0007845,4.04e-08,3;UBERON:0004457,1.25e-07,12;UBERON:0000042,1.25e-07,12;UBERON:0002384,1.77e-07,371 | |||
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| ||
|short_description=p@chr17:48263814..48263827,+ | |short_description=p@chr17:48263814..48263827,+ | ||
}} | }} |
Latest revision as of 18:32, 25 July 2015
Short description: | p@chr17:48263814..48263827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48263814..48263827, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.13e-19 | 76 |
preadipocyte | 3.12e-18 | 12 |
multi fate stem cell | 1.53e-08 | 427 |
somatic stem cell | 3.49e-08 | 433 |
fibrocyte | 4.04e-08 | 3 |
tendon cell | 4.04e-08 | 3 |
stem cell | 1.00e-07 | 441 |
connective tissue cell | 1.48e-07 | 361 |
mesenchymal cell | 4.54e-07 | 354 |
preadipocyte of the breast | 5.12e-07 | 3 |
omentum preadipocyte | 5.23e-07 | 3 |
stromal cell | 5.28e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.80e-08 | 6 |
peritoneum | 1.80e-08 | 6 |
abdominal cavity | 1.80e-08 | 6 |
visceral peritoneum | 1.80e-08 | 6 |
dense regular connective tissue | 4.04e-08 | 3 |
tendon | 4.04e-08 | 3 |
regular connective tissue | 4.04e-08 | 3 |
cavity lining | 1.25e-07 | 12 |
serous membrane | 1.25e-07 | 12 |
connective tissue | 1.77e-07 | 371 |