FFCP PHASE1:Hg19::chr1:110752586..110752596,-: Difference between revisions
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|id=chr1:110752586..110752596,-
|short_description=p1@KCNC4-AS1
|description=CAGE_peak_1_at_KCNC4-AS1_5end
|association_with_transcript=12bp_to_ENST00000455967_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39958 | |HGNC=39958 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000455967_5end | |||
|cluster_id=chr1:110752586..110752596,- | |||
|coexpression_cluster_id=C968 | |||
|description=CAGE_peak_1_at_KCNC4-AS1_5end | |||
|id=chr1:110752586..110752596,- | |||
|ontology_enrichment_celltype=CL:0002322!1.72e-10!5;CL:0002619!1.10e-08!3;CL:0000623!1.43e-08!3;CL:0000825!1.43e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.24e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.24e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.72e-27;10!UBERON:0005564;2.72e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.01e-11!8;UBERON:0003135!1.51e-08!11;UBERON:0002336!7.57e-07!1;UBERON:0001018!7.57e-07!1;UBERON:0002473!7.57e-07!1;UBERON:0005340!7.57e-07!1;UBERON:0002316!7.57e-07!1;UBERON:0003544!7.57e-07!1;UBERON:0001020!7.57e-07!1;UBERON:0005970!7.57e-07!1;UBERON:0002437!7.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.08e-34;8!UBERON:0003135;6.20e-25;11!UBERON:0000991;1.16e-13;21!UBERON:0003101;4.26e-13;22!UBERON:0000079;4.26e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.08e-34,8;UBERON:0003135,6.20e-25,11;UBERON:0000991,1.16e-13,21;UBERON:0009196,1.16e-13,21;UBERON:0009117,1.16e-13,21;UBERON:0005564,1.16e-13,21;UBERON:0004176,4.26e-13,22;UBERON:0003101,4.26e-13,22;UBERON:0000079,4.26e-13,22;UBERON:0002323,7.74e-07,46 | |||
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|short_description=p1@KCNC4-AS1 | |||
}} | }} |
Latest revision as of 00:22, 16 September 2015
Short description: | p1@KCNC4-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNC4-AS1_5end |
Coexpression cluster: | C968_Mesenchymal_testis_MCF7_mature_Adipocyte_Fibroblast_Alveolar |
Association with transcript: | 12bp_to_ENST00000455967_5end |
EntrezGene: | NA |
HGNC: | 39958 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 9.08e-34 | 8 |
male reproductive organ | 6.20e-25 | 11 |
gonad | 1.16e-13 | 21 |
indifferent external genitalia | 1.16e-13 | 21 |
indifferent gonad | 1.16e-13 | 21 |
gonad primordium | 1.16e-13 | 21 |
external genitalia | 4.26e-13 | 22 |
male organism | 4.26e-13 | 22 |
male reproductive system | 4.26e-13 | 22 |
body cavity | 7.74e-07 | 46 |