FFCP PHASE1:Hg19::chr2:158182255..158182298,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57471 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29208 | |||
|TSSclassifier=strong | |||
|UniProt=B8ZZ94,B4DIZ1 | |||
|association_with_transcript=37bp_to_ENST00000409216,ENST00000420719_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_ERMN_5end | |||
|id=chr2:158182255..158182298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.53e-24;82!UBERON:0006241;1.51e-12;3!UBERON:0003057;1.51e-12;3!UBERON:0006215;5.86e-11;3!UBERON:0010122;5.34e-08;2!UBERON:0002532;4.12e-07;206!UBERON:0010316;4.12e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.77e-85!57;UBERON:0005068!8.77e-85!57;UBERON:0006241!8.77e-85!57;UBERON:0007135!8.77e-85!57;UBERON:0005743!5.96e-77!86;UBERON:0001017!1.10e-71!82;UBERON:0000073!1.35e-71!94;UBERON:0001016!1.35e-71!94;UBERON:0002616!1.13e-69!59;UBERON:0000955!2.84e-66!69;UBERON:0006238!2.84e-66!69;UBERON:0003075!5.72e-66!86;UBERON:0007284!5.72e-66!86;UBERON:0002346!1.86e-62!90;UBERON:0002780!6.74e-62!41;UBERON:0001890!6.74e-62!41;UBERON:0006240!6.74e-62!41;UBERON:0003080!3.16e-60!42;UBERON:0001893!1.25e-53!34;UBERON:0002020!1.30e-53!34;UBERON:0003528!1.30e-53!34;UBERON:0007023!1.75e-53!115;UBERON:0002791!3.42e-51!33;UBERON:0001869!1.67e-48!32;UBERON:0003056!5.94e-47!61;UBERON:0000033!1.71e-39!123;UBERON:0000153!9.43e-39!129;UBERON:0007811!9.43e-39!129;UBERON:0002619!1.84e-37!22;UBERON:0004121!5.75e-34!169;UBERON:0001950!6.00e-33!20;UBERON:0000924!7.28e-33!173;UBERON:0006601!7.28e-33!173;UBERON:0000956!1.67e-32!25;UBERON:0000203!1.67e-32!25;UBERON:0003076!1.75e-24!15;UBERON:0003057!1.75e-24!15;UBERON:0002308!9.91e-24!9;UBERON:0000125!9.91e-24!9;UBERON:0002420!4.21e-23!9;UBERON:0007245!4.21e-23!9;UBERON:0010009!4.21e-23!9;UBERON:0010011!4.21e-23!9;UBERON:0000454!4.21e-23!9;UBERON:0000025!1.30e-21!194;UBERON:0004732!9.29e-20!13;UBERON:0009663!1.34e-18!7;UBERON:0004733!2.83e-17!12;UBERON:0002028!2.83e-17!12;UBERON:0007277!2.83e-17!12;UBERON:0002298!3.43e-17!8;UBERON:0004111!1.22e-16!241;UBERON:0000200!6.35e-16!6;UBERON:0000477!2.89e-14!286;UBERON:0000483!8.48e-14!309;UBERON:0000119!1.57e-13!312;UBERON:0000349!2.92e-13!5;UBERON:0000064!5.86e-12!219;UBERON:0001871!1.39e-11!7;UBERON:0000369!6.89e-11!4;UBERON:0002435!6.89e-11!4;UBERON:0000204!6.89e-11!4;UBERON:0010082!6.89e-11!4;UBERON:0002680!1.99e-10!9;UBERON:0001895!1.99e-10!9;UBERON:0010092!1.99e-10!9;UBERON:0000475!3.34e-10!365;UBERON:0001894!1.55e-09!7;UBERON:0006222!1.55e-09!7;UBERON:0000988!1.58e-09!3;UBERON:0006331!1.71e-09!3;UBERON:0002240!2.19e-09!3;UBERON:0001896!2.32e-09!3;UBERON:0005290!2.32e-09!3;UBERON:0010096!2.32e-09!3;UBERON:0002021!5.46e-09!5;UBERON:0002771!6.11e-09!3;UBERON:0001872!6.71e-09!5;UBERON:0005383!1.98e-08!3;UBERON:0005382!1.98e-08!3;UBERON:0005162!4.50e-07!2;UBERON:0000122!4.50e-07!2;UBERON:0001897!7.25e-07!2;UBERON:0002148!8.10e-07!2;UBERON:0009662!8.10e-07!2;UBERON:0001875!9.30e-07!2;UBERON:0006514!9.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.39e-65;34!UBERON:0003528;3.55e-63;34!UBERON:0002020;3.55e-63;34!UBERON:0002791;2.66e-61;32!UBERON:0001869;3.88e-61;32!UBERON:0000073;2.72e-56;53!UBERON:0002616;2.72e-56;53!UBERON:0002780;5.65e-55;41!UBERON:0001890;5.65e-55;41!UBERON:0002619;1.03e-52;22!UBERON:0001950;2.41e-46;20!UBERON:0000956;4.52e-46;25!UBERON:0000203;4.52e-46;25!UBERON:0001017;2.65e-38;75!UBERON:0000955;3.64e-36;68!UBERON:0000125;9.55e-33;9!UBERON:0002308;9.55e-33;9!UBERON:0002420;7.47e-32;9!UBERON:0007245;7.47e-32;9!UBERON:0010009;7.47e-32;9!UBERON:0010011;7.47e-32;9!UBERON:0000454;7.47e-32;9!UBERON:0001016;1.33e-31;83!UBERON:0004732;1.31e-27;13!UBERON:0009663;1.61e-25;7!UBERON:0004733;4.29e-24;12!UBERON:0002028;4.29e-24;12!UBERON:0002298;1.64e-23;6!UBERON:0000200;9.60e-22;6!UBERON:0007023;7.21e-20;114!UBERON:0000349;5.74e-18;5!UBERON:0000369;1.15e-14;4!UBERON:0002435;1.15e-14;4!UBERON:0000204;1.15e-14;4!UBERON:0002680;2.08e-14;9!UBERON:0001895;2.08e-14;9!UBERON:0001871;8.51e-13;6!UBERON:0000988;9.50e-13;3!UBERON:0002240;1.51e-12;3!UBERON:0005174;1.51e-12;3!UBERON:0001137;1.51e-12;3!UBERON:0001896;1.63e-12;3!UBERON:0005290;1.63e-12;3!UBERON:0011216;1.92e-12;132!UBERON:0002021;3.82e-12;5!UBERON:0001872;5.11e-12;5!UBERON:0001870;9.92e-12;3!UBERON:0005383;3.25e-11;3!UBERON:0005382;3.25e-11;3!UBERON:0010314;4.03e-11;132!UBERON:0005162;2.61e-09;2!UBERON:0000122;2.61e-09;2!UBERON:0001897;5.09e-09;2!UBERON:0010225;5.09e-09;2!UBERON:0002148;5.95e-09;2!UBERON:0006331;5.95e-09;2!UBERON:0009662;5.95e-09;2!UBERON:0001875;7.08e-09;2!UBERON:0006514;7.08e-09;2!UBERON:0002771;1.70e-08;2!UBERON:0001954;3.64e-08;2!UBERON:0002702;3.64e-08;2!UBERON:0003022;3.64e-08;2!UBERON:0002421;3.64e-08;2!UBERON:0002600;3.64e-08;2!UBERON:0001876;4.78e-08;2!UBERON:0001873;5.34e-08;2!UBERON:0002360;6.99e-08;2!UBERON:0000094;6.99e-08;2!UBERON:0010743;6.99e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.89e-113,56;UBERON:0005068,7.89e-113,56;UBERON:0006241,7.89e-113,56;UBERON:0007135,7.89e-113,56;UBERON:0000073,3.96e-102,53;UBERON:0002616,3.96e-102,53;UBERON:0001017,4.44e-90,81;UBERON:0003075,2.31e-86,82;UBERON:0007284,2.31e-86,82;UBERON:0000955,3.07e-85,68;UBERON:0006238,3.07e-85,68;UBERON:0001016,2.60e-84,89;UBERON:0002346,6.32e-82,86;UBERON:0002780,6.20e-78,41;UBERON:0001890,6.20e-78,41;UBERON:0003080,6.20e-78,41;UBERON:0006240,6.20e-78,41;UBERON:0001893,4.94e-76,34;UBERON:0003528,5.24e-76,34;UBERON:0002020,5.24e-76,34;UBERON:0002791,5.98e-69,32;UBERON:0001869,8.99e-69,32;UBERON:0010371,3.87e-66,104;UBERON:0007023,4.04e-66,114;UBERON:0003056,1.41e-61,61;UBERON:0010314,4.43e-55,132;UBERON:0002619,9.59e-53,22;UBERON:0001950,2.30e-46,20;UBERON:0000956,4.23e-46,25;UBERON:0000203,4.23e-46,25;UBERON:0004121,9.30e-44,171;UBERON:0000924,9.30e-44,171;UBERON:0006601,9.30e-44,171;UBERON:0003076,2.84e-34,15;UBERON:0003057,2.84e-34,15;UBERON:0000125,9.92e-33,9;UBERON:0002308,9.92e-33,9;UBERON:0002420,7.61e-32,9;UBERON:0007245,7.61e-32,9;UBERON:0010009,7.61e-32,9;UBERON:0010011,7.61e-32,9;UBERON:0000454,7.61e-32,9;UBERON:0011216,5.14e-31,223;UBERON:0000025,7.64e-28,192;UBERON:0004732,1.35e-27,13;UBERON:0009663,1.67e-25,7;UBERON:0004733,4.41e-24,12;UBERON:0002028,4.41e-24,12;UBERON:0007277,4.41e-24,12;UBERON:0002298,1.64e-23,6;UBERON:0000200,9.78e-22,6;UBERON:0004111,1.67e-21,240;UBERON:0000349,5.44e-18,5;UBERON:0000483,7.35e-18,306;UBERON:0000119,1.39e-17,309;UBERON:0000369,1.17e-14,4;UBERON:0002435,1.17e-14,4;UBERON:0000204,1.17e-14,4;UBERON:0010082,1.17e-14,4;UBERON:0002680,2.13e-14,9;UBERON:0001895,2.13e-14,9;UBERON:0010092,2.13e-14,9;UBERON:0001871,8.40e-13,6;UBERON:0000988,9.50e-13,3;UBERON:0002240,1.51e-12,3;UBERON:0005174,1.51e-12,3;UBERON:0001137,1.51e-12,3;UBERON:0001896,1.63e-12,3;UBERON:0005290,1.63e-12,3;UBERON:0010096,1.63e-12,3;UBERON:0002021,3.76e-12,5;UBERON:0001872,5.04e-12,5;UBERON:0001870,9.92e-12,3;UBERON:0005383,3.30e-11,3;UBERON:0005382,3.30e-11,3;UBERON:0005162,2.61e-09,2;UBERON:0000122,2.61e-09,2;UBERON:0001897,5.09e-09,2;UBERON:0010225,5.09e-09,2;UBERON:0002148,5.95e-09,2;UBERON:0006331,5.95e-09,2;UBERON:0009662,5.95e-09,2;UBERON:0001875,7.22e-09,2;UBERON:0006514,7.22e-09,2;UBERON:0002771,1.73e-08,2;UBERON:0001954,3.51e-08,2;UBERON:0003022,3.51e-08,2;UBERON:0002421,3.51e-08,2;UBERON:0002600,3.51e-08,2;UBERON:0002702,3.64e-08,2;UBERON:0001876,4.70e-08,2;UBERON:0001873,5.43e-08,2;UBERON:0010122,5.43e-08,2;UBERON:0002360,7.25e-08,2;UBERON:0000094,7.25e-08,2;UBERON:0010743,7.25e-08,2;UBERON:0000923,8.02e-08,560;UBERON:0010316,8.02e-08,560;UBERON:0005291,8.02e-08,560;UBERON:0006598,8.02e-08,560;UBERON:0010317,8.02e-08,560;UBERON:0002532,8.02e-08,560;UBERON:0002050,1.09e-07,564;UBERON:0000922,2.02e-07,592;UBERON:0005423,3.91e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3080511260475,0,0.976135183992909,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,15.8956440543879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5093239375235,66.5147263820474,0,0,0,0,0,0,0,0,0,0,12.4003794013937,10.3712937217851,7.62908681585416,3.98085335752409,11.2308095202348,14.6988216093162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,100.899496072074,0,122.754569560078,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90932592731864,0,0,48.2428265183796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6277390548461,66.1252980048326,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,29.6923425323235,0,0,0,0,0,23.2063306433654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,67.6149861770909,54.2153667145029,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,6.2024772597689,19.0360973247063,31.9236873301575,32.6843241543341,72.4366706535645,74.9503583502498,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.8506205586363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6561139505448,24.0884179753494,34.1616458382304,34.4595491924468,0,11.6875756664528,27.7738110486784,154.190973879887,0,0,0,0,0,0,0,0,0,0,0,0,0,37.9561225555378,22.6512648598016,19.4285588711113,30.3761730828814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,108.955481961861,20.915741992986,0,0,0,13.3548251428602,0,0,0,0,51.3201587188393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,98.1542335574726,78.7172960866778,25.359343655004,0,0,0,0,0,0,0,0,0,84.8570332256592,0,12.9183831362738,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,63.0168773988672,77.8850458840071,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@ERMN | |||
}} |
Revision as of 06:09, 21 January 2014
Short description: | p2@ERMN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERMN_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 37bp_to_ENST00000409216, ENST00000420719_5end |
EntrezGene: | ERMN |
HGNC: | 29208 |
UniProt: | B8ZZ94B4DIZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data