FFCP PHASE1:Hg19::chr3:129375541..129375549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |||
|TSSclassifier=strong | |||
|UniProt=D6RH19 | |||
|association_with_transcript=19bp_to_ENST00000510323_5end | |||
|coexpression_cluster_id=C4281 | |||
|description=CAGE_peak_23_at_TMCC1_5end | |||
|id=chr3:129375541..129375549,- | |||
|ontology_enrichment_celltype=CL:0000181!4.52e-14!12;CL:0000417!4.52e-14!12;CL:0000668!4.52e-14!12;CL:0000414!4.52e-14!12;CL:0000412!4.52e-14!12;CL:0000182!4.52e-14!12;CL:0000319!3.55e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.89e-51;12!CL:0000319;5.93e-26;1!CL:0000159;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.99e-51,12;CL:0000319,5.93e-26,1;CL:0000159,1.07e-13,2;CL:0000223,6.25e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-36;11!UBERON:0009497;6.97e-31;13!UBERON:0003104;3.10e-20;31!UBERON:0001041;1.06e-13;30!CL:0000223;8.16e-08;58 | |||
|ontology_enrichment_disease=DOID:3030!3.55e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.93e-26;1!DOID:7;1.40e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.93e-26,1;DOID:7,1.05e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0008835!2.05e-18!22;UBERON:0003894!2.05e-18!22;UBERON:0009854!1.46e-17!23;UBERON:0002107!1.09e-16!19;UBERON:0006925!1.09e-16!19;UBERON:0008836!1.09e-16!19;UBERON:0007499!4.60e-16!25;UBERON:0009497!4.60e-16!25;UBERON:0000015!4.60e-16!25;UBERON:0002423!4.60e-16!25;UBERON:0006235!4.60e-16!25;UBERON:0004161!4.60e-16!25;UBERON:0009856!2.12e-15!26;UBERON:0005057!5.88e-12!26;UBERON:0005172!1.81e-10!55;UBERON:0005173!1.81e-10!55;UBERON:0002365!6.96e-10!31;UBERON:0002330!6.96e-10!31;UBERON:0002417!2.89e-09!61;UBERON:0000916!2.89e-09!61;UBERON:0002368!1.19e-08!35;UBERON:0000949!2.24e-08!45;UBERON:0001301!7.45e-08!1;UBERON:0003914!5.63e-07!118;UBERON:0003929!8.37e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.27e-46;19!UBERON:0006925;1.27e-46;19!UBERON:0002423;1.58e-35;25!UBERON:0002365;5.18e-27;31!UBERON:0002330;5.18e-27;31!UBERON:0002368;4.06e-26;33!UBERON:0000949;6.76e-18;43!UBERON:0002417;4.11e-16;58!UBERON:0000916;4.11e-16;58!UBERON:0005172;9.18e-14;52!UBERON:0005173;9.18e-14;52!UBERON:0002530;1.20e-10;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.22e-46,19;UBERON:0006925,1.22e-46,19;UBERON:0008836,1.22e-46,19;UBERON:0008835,2.46e-40,22;UBERON:0003894,2.46e-40,22;UBERON:0009854,1.34e-38,23;UBERON:0007499,1.53e-35,25;UBERON:0009497,1.53e-35,25;UBERON:0000015,1.53e-35,25;UBERON:0002423,1.53e-35,25;UBERON:0006235,1.53e-35,25;UBERON:0004161,1.53e-35,25;UBERON:0009856,3.46e-34,26;UBERON:0002365,9.98e-29,31;UBERON:0002330,9.98e-29,31;UBERON:0002368,1.77e-25,35;UBERON:0005172,1.83e-22,54;UBERON:0005173,1.83e-22,54;UBERON:0002417,3.12e-20,60;UBERON:0000916,3.12e-20,60;UBERON:0000949,7.13e-20,45;UBERON:0003929,1.35e-16,54;UBERON:0002530,3.33e-15,59;UBERON:0005177,4.78e-12,101;UBERON:0005911,5.67e-11,82;UBERON:0009569,7.30e-11,112;UBERON:0001041,2.40e-10,87;UBERON:0003914,1.06e-07,117;UBERON:0003104,1.39e-07,160;UBERON:0009142,1.39e-07,160;UBERON:0004921,1.43e-07,118;UBERON:0005256,2.20e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27847321458398,4.28562463582066,6.40333666614756,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,3.44082072255207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26190014534002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p23@TMCC1 | |||
}} |
Revision as of 21:20, 21 January 2014
Short description: | p23@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TMCC1_5end |
Coexpression cluster: | C4281_renal_hepatocellular_Hepatocyte_liver_mesothelioma_mucinous_signet |
Association with transcript: | 19bp_to_ENST00000510323_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | D6RH19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.99e-51 | 12 |
mucus secreting cell | 5.93e-26 | 1 |
seromucus secreting cell | 1.07e-13 | 2 |
endodermal cell | 6.25e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.22e-46 | 19 |
digestive gland | 1.22e-46 | 19 |
liver bud | 1.22e-46 | 19 |
hepatic diverticulum | 2.46e-40 | 22 |
liver primordium | 2.46e-40 | 22 |
digestive tract diverticulum | 1.34e-38 | 23 |
epithelial sac | 1.53e-35 | 25 |
epithelium of foregut-midgut junction | 1.53e-35 | 25 |
anatomical boundary | 1.53e-35 | 25 |
hepatobiliary system | 1.53e-35 | 25 |
foregut-midgut junction | 1.53e-35 | 25 |
septum transversum | 1.53e-35 | 25 |
sac | 3.46e-34 | 26 |
exocrine gland | 9.98e-29 | 31 |
exocrine system | 9.98e-29 | 31 |
endocrine gland | 1.77e-25 | 35 |
abdomen element | 1.83e-22 | 54 |
abdominal segment element | 1.83e-22 | 54 |
abdominal segment of trunk | 3.12e-20 | 60 |
abdomen | 3.12e-20 | 60 |
endocrine system | 7.13e-20 | 45 |
gut epithelium | 1.35e-16 | 54 |
gland | 3.33e-15 | 59 |
trunk region element | 4.78e-12 | 101 |
endo-epithelium | 5.67e-11 | 82 |
subdivision of trunk | 7.30e-11 | 112 |
foregut | 2.40e-10 | 87 |
epithelial tube | 1.06e-07 | 117 |
mesenchyme | 1.39e-07 | 160 |
entire embryonic mesenchyme | 1.39e-07 | 160 |
subdivision of digestive tract | 1.43e-07 | 118 |
trunk mesenchyme | 2.20e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.93e-26 | 1 |
disease of anatomical entity | 1.05e-10 | 39 |