FFCP PHASE1:Hg19::chr4:699610..699639,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10336 | |EntrezGene=10336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10066 | |HGNC=10066 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3P3 | |UniProt=F2Z3P3 | ||
|association_with_transcript=0bp_to_ENST00000430644_5end | |association_with_transcript=0bp_to_ENST00000430644_5end | ||
|cluster_id=chr4:699610..699639,+ | |||
|description=CAGE_peak_1_at_PCGF3_5end | |description=CAGE_peak_1_at_PCGF3_5end | ||
|id=chr4:699610..699639,+ | |id=chr4:699610..699639,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.51e-21!42;CL:0000860!5.39e-18!45;CL:0000766!3.05e-10!76;CL:0000557!1.03e-09!71;CL:0000738!1.09e-09!140;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002009!1.53e-08!65;CL:0002031!2.81e-08!124;CL:0002087!3.10e-08!119;CL:0000839!3.68e-08!70 | |ontology_enrichment_celltype=CL:0002057!3.51e-21!42;CL:0000860!5.39e-18!45;CL:0000766!3.05e-10!76;CL:0000557!1.03e-09!71;CL:0000738!1.09e-09!140;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002009!1.53e-08!65;CL:0002031!2.81e-08!124;CL:0002087!3.10e-08!119;CL:0000839!3.68e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.30e-18;33!CL:0002057;5.30e-18;33!CL:0000473;1.13e-10;39!CL:0000234;1.13e-10;39!CL:0000576;1.87e-10;48!CL:0000766;1.50e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.51e-21,42;CL:0002057,3.51e-21,42;CL:0000473,5.99e-16,48;CL:0000234,5.99e-16,48;CL:0000766,7.90e-12,72;CL:0000557,2.60e-11,67;CL:0000738,1.02e-10,136;CL:0002194,3.47e-10,59;CL:0000576,3.47e-10,59;CL:0000040,3.47e-10,59;CL:0000559,3.47e-10,59;CL:0002009,4.36e-10,61;CL:0000839,1.39e-09,66;CL:0002031,2.84e-09,120;CL:0002087,2.98e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.88e-08!80;UBERON:0002619!1.67e-07!22;UBERON:0003081!1.91e-07!216;UBERON:0001474!2.70e-07!86;UBERON:0001950!5.36e-07!20;UBERON:0001869!7.83e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.28e-07;22!UBERON:0001950;7.45e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.31e-09,76;UBERON:0002405,1.28e-08,93;UBERON:0003081,1.31e-08,203;UBERON:0001474,1.94e-08,82;UBERON:0002619,1.67e-07,22;UBERON:0001950,5.36e-07,20;UBERON:0002791,6.98e-07,32;UBERON:0001869,7.83e-07,32 | |||
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| ||
|short_description=p1@PCGF3 | |short_description=p1@PCGF3 | ||
}} | }} |
Latest revision as of 08:18, 18 September 2015
Short description: | p1@PCGF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCGF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000430644_5end |
EntrezGene: | PCGF3 |
HGNC: | 10066 |
UniProt: | F2Z3P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.51e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.51e-21 | 42 |
defensive cell | 5.99e-16 | 48 |
phagocyte | 5.99e-16 | 48 |
myeloid leukocyte | 7.90e-12 | 72 |
granulocyte monocyte progenitor cell | 2.60e-11 | 67 |
leukocyte | 1.02e-10 | 136 |
monopoietic cell | 3.47e-10 | 59 |
monocyte | 3.47e-10 | 59 |
monoblast | 3.47e-10 | 59 |
promonocyte | 3.47e-10 | 59 |
macrophage dendritic cell progenitor | 4.36e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.39e-09 | 66 |
hematopoietic lineage restricted progenitor cell | 2.84e-09 | 120 |
nongranular leukocyte | 2.98e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.31e-09 | 76 |
immune system | 1.28e-08 | 93 |
lateral plate mesoderm | 1.31e-08 | 203 |
bone element | 1.94e-08 | 82 |
regional part of cerebral cortex | 1.67e-07 | 22 |
neocortex | 5.36e-07 | 20 |
regional part of telencephalon | 6.98e-07 | 32 |
cerebral hemisphere | 7.83e-07 | 32 |