FFCP PHASE1:Hg19::chr8:124194824..124194835,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84985|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28210|TSSclassifier=S|UniProt=Q86UY5|association_with_transcript=72bp_to_ENST00000318462,NM_032899,NM_207006_5end|coexpression_cluster_id=C4725|description=CAGE_peak_5_at_FAM83A_5end|id=chr8:124194824..124194835,+|ontology_enrichment_celltype=CL:0000066!8.06e-28!254;CL:0002368!1.84e-26!13;CL:0002076!3.62e-20!43;CL:0002202!2.66e-17!9;CL:0002632!2.66e-17!9;CL:0000223!4.17e-13!59;CL:0002159!1.69e-11!13;CL:0000244!8.61e-11!4;CL:0000731!8.61e-11!4;CL:0002328!7.40e-09!3;CL:0000068!1.70e-08!3;CL:0000069!1.70e-08!3;CL:0000307!1.70e-08!3;CL:0000377!1.70e-08!3;CL:0000076!3.06e-08!62;CL:0002150!2.80e-07!3;CL:0000861!2.80e-07!3;CL:0000240!3.78e-07!6;CL:0000311!3.78e-07!6;CL:0000079!3.78e-07!6;CL:0000237!3.78e-07!6;CL:0000036!3.78e-07!6;CL:0000357!3.78e-07!6;CL:0000114!3.78e-07!6|ontology_enrichment_celltype_v019=CL:0002368;4.90e-30;13!CL:0000244;4.98e-20;4!CL:0000731;4.98e-20;4!CL:0002202;1.57e-19;9!CL:0002632;1.57e-19;9!CL:0002328;7.72e-16;3!CL:0002076;1.62e-15;42!CL:0000307;1.67e-15;3!CL:0002159;1.56e-12;14!CL:0000575;2.59e-11;2!CL:0000312;7.31e-10;5!CL:0000240;2.75e-08;6!CL:0000311;2.75e-08;6!CL:0000079;2.75e-08;6!CL:0000237;2.75e-08;6!CL:0002231;1.37e-07;3!CL:0002621;1.78e-07;3|ontology_enrichment_celltype_v019_2=CL:0002368,4.16e-30,13;CL:0002076,2.84e-20,42;CL:0000244,6.72e-20,4;CL:0000731,6.72e-20,4;CL:0002202,1.46e-19,9;CL:0002632,1.46e-19,9;CL:0000066,5.23e-17,253;CL:0002328,4.68e-16,3;CL:0000068,2.43e-15,3;CL:0000069,2.43e-15,3;CL:0000307,2.43e-15,3;CL:0000377,2.43e-15,3;CL:0000223,7.69e-14,58;CL:0002159,1.62e-12,14;CL:0000575,2.59e-11,2;CL:0000312,6.70e-10,5;CL:0000240,2.55e-08,6;CL:0000311,2.55e-08,6;CL:0000079,2.55e-08,6;CL:0000237,2.55e-08,6;CL:0000036,2.55e-08,6;CL:0000357,2.55e-08,6;CL:0000114,2.55e-08,6;CL:0002231,1.44e-07,3;CL:0002621,1.64e-07,3|ontology_enrichment_development_v019=CL:0000377;1.67e-15;3!CL:0000223;5.16e-09;58!CL:0000357;2.75e-08;6!CL:0000114;2.75e-08;6|ontology_enrichment_disease=DOID:305!6.72e-08!106;DOID:1749!1.53e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007196!1.20e-16!14;UBERON:0001558!1.20e-16!14;UBERON:0000065!6.91e-15!53;UBERON:0004119!5.24e-14!169;UBERON:0000925!5.24e-14!169;UBERON:0006595!5.24e-14!169;UBERON:0001004!3.33e-13!72;UBERON:0000365!2.01e-12!5;UBERON:0005178!4.20e-11!34;UBERON:0002224!4.20e-11!34;UBERON:0000072!6.33e-11!46;UBERON:0008947!9.76e-11!38;UBERON:0003258!9.76e-11!38;UBERON:0005181!1.10e-10!35;UBERON:0005910!2.80e-10!6;UBERON:0003126!3.20e-09!7;UBERON:0001005!3.20e-09!7;UBERON:0004815!7.40e-09!3;UBERON:0002031!7.40e-09!3;UBERON:0001007!1.05e-08!155;UBERON:0001555!1.05e-08!155;UBERON:0007026!1.05e-08!155;UBERON:0005153!3.61e-08!37;UBERON:0000305!5.74e-08!7;UBERON:0005911!6.96e-08!82;UBERON:0000077!7.46e-08!130;UBERON:0004921!7.69e-08!129;UBERON:0004185!7.69e-08!129;UBERON:0005157!2.86e-07!51;UBERON:0001041!4.68e-07!98;UBERON:0004871!6.33e-07!8|ontology_enrichment_uberon_v019=UBERON:0007196;4.06e-20;15!UBERON:0001558;4.06e-20;15!UBERON:0003126;1.33e-17;7!UBERON:0001005;1.33e-17;7!UBERON:0000365;4.65e-16;5!UBERON:0004815;7.72e-16;3!UBERON:0002031;7.72e-16;3!UBERON:0000486;2.90e-14;12!UBERON:0005910;2.09e-13;6!UBERON:0003127;5.65e-11;2!UBERON:0002185;1.08e-09;5!UBERON:0005178;1.83e-09;34!UBERON:0002224;1.83e-09;34!UBERON:0005181;5.78e-09;35!UBERON:0000065;1.17e-08;44!UBERON:0001949;1.78e-07;3!UBERON:0005911;1.90e-07;36!UBERON:0000485;4.84e-07;7!UBERON:0000072;8.14e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0007196,3.98e-20,15;UBERON:0001558,3.98e-20,15;UBERON:0003126,1.83e-17,7;UBERON:0001005,1.83e-17,7;UBERON:0004815,4.68e-16,3;UBERON:0002031,4.68e-16,3;UBERON:0000365,5.90e-16,5;UBERON:0005910,2.54e-13,6;UBERON:0004119,2.21e-12,160;UBERON:0000925,2.21e-12,160;UBERON:0006595,2.21e-12,160;UBERON:0003127,6.11e-11,2;UBERON:0000065,7.10e-11,54;UBERON:0005178,2.81e-10,34;UBERON:0002224,2.81e-10,34;UBERON:0001004,3.52e-10,74;UBERON:0005181,6.11e-10,35;UBERON:0002185,8.01e-10,5;UBERON:0005911,5.80e-09,82;UBERON:0001949,1.64e-07,3;UBERON:0008947,3.43e-07,38;UBERON:0003258,3.43e-07,38;UBERON:0000072,5.43e-07,47;UBERON:0004913,9.91e-07,1;UBERON:0003703,9.91e-07,1;UBERON:0001174,9.91e-07,1;UBERON:0004914,9.91e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.409647350226,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64295288292542,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,0,1.72082757233402,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28210 | |||
|TSSclassifier=S | |||
|UniProt=Q86UY5 | |||
|association_with_transcript=72bp_to_ENST00000318462,NM_032899,NM_207006_5end | |||
|coexpression_cluster_id=C4725 | |||
|description=CAGE_peak_5_at_FAM83A_5end | |||
|id=chr8:124194824..124194835,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.06e-28!254;CL:0002368!1.84e-26!13;CL:0002076!3.62e-20!43;CL:0002202!2.66e-17!9;CL:0002632!2.66e-17!9;CL:0000223!4.17e-13!59;CL:0002159!1.69e-11!13;CL:0000244!8.61e-11!4;CL:0000731!8.61e-11!4;CL:0002328!7.40e-09!3;CL:0000068!1.70e-08!3;CL:0000069!1.70e-08!3;CL:0000307!1.70e-08!3;CL:0000377!1.70e-08!3;CL:0000076!3.06e-08!62;CL:0002150!2.80e-07!3;CL:0000861!2.80e-07!3;CL:0000240!3.78e-07!6;CL:0000311!3.78e-07!6;CL:0000079!3.78e-07!6;CL:0000237!3.78e-07!6;CL:0000036!3.78e-07!6;CL:0000357!3.78e-07!6;CL:0000114!3.78e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.90e-30;13!CL:0000244;4.98e-20;4!CL:0000731;4.98e-20;4!CL:0002202;1.57e-19;9!CL:0002632;1.57e-19;9!CL:0002328;7.72e-16;3!CL:0002076;1.62e-15;42!CL:0000307;1.67e-15;3!CL:0002159;1.56e-12;14!CL:0000575;2.59e-11;2!CL:0000312;7.31e-10;5!CL:0000240;2.75e-08;6!CL:0000311;2.75e-08;6!CL:0000079;2.75e-08;6!CL:0000237;2.75e-08;6!CL:0002231;1.37e-07;3!CL:0002621;1.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.16e-30,13;CL:0002076,2.84e-20,42;CL:0000244,6.72e-20,4;CL:0000731,6.72e-20,4;CL:0002202,1.46e-19,9;CL:0002632,1.46e-19,9;CL:0000066,5.23e-17,253;CL:0002328,4.68e-16,3;CL:0000068,2.43e-15,3;CL:0000069,2.43e-15,3;CL:0000307,2.43e-15,3;CL:0000377,2.43e-15,3;CL:0000223,7.69e-14,58;CL:0002159,1.62e-12,14;CL:0000575,2.59e-11,2;CL:0000312,6.70e-10,5;CL:0000240,2.55e-08,6;CL:0000311,2.55e-08,6;CL:0000079,2.55e-08,6;CL:0000237,2.55e-08,6;CL:0000036,2.55e-08,6;CL:0000357,2.55e-08,6;CL:0000114,2.55e-08,6;CL:0002231,1.44e-07,3;CL:0002621,1.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.67e-15;3!CL:0000223;5.16e-09;58!CL:0000357;2.75e-08;6!CL:0000114;2.75e-08;6 | |||
|ontology_enrichment_disease=DOID:305!6.72e-08!106;DOID:1749!1.53e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!1.20e-16!14;UBERON:0001558!1.20e-16!14;UBERON:0000065!6.91e-15!53;UBERON:0004119!5.24e-14!169;UBERON:0000925!5.24e-14!169;UBERON:0006595!5.24e-14!169;UBERON:0001004!3.33e-13!72;UBERON:0000365!2.01e-12!5;UBERON:0005178!4.20e-11!34;UBERON:0002224!4.20e-11!34;UBERON:0000072!6.33e-11!46;UBERON:0008947!9.76e-11!38;UBERON:0003258!9.76e-11!38;UBERON:0005181!1.10e-10!35;UBERON:0005910!2.80e-10!6;UBERON:0003126!3.20e-09!7;UBERON:0001005!3.20e-09!7;UBERON:0004815!7.40e-09!3;UBERON:0002031!7.40e-09!3;UBERON:0001007!1.05e-08!155;UBERON:0001555!1.05e-08!155;UBERON:0007026!1.05e-08!155;UBERON:0005153!3.61e-08!37;UBERON:0000305!5.74e-08!7;UBERON:0005911!6.96e-08!82;UBERON:0000077!7.46e-08!130;UBERON:0004921!7.69e-08!129;UBERON:0004185!7.69e-08!129;UBERON:0005157!2.86e-07!51;UBERON:0001041!4.68e-07!98;UBERON:0004871!6.33e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.06e-20;15!UBERON:0001558;4.06e-20;15!UBERON:0003126;1.33e-17;7!UBERON:0001005;1.33e-17;7!UBERON:0000365;4.65e-16;5!UBERON:0004815;7.72e-16;3!UBERON:0002031;7.72e-16;3!UBERON:0000486;2.90e-14;12!UBERON:0005910;2.09e-13;6!UBERON:0003127;5.65e-11;2!UBERON:0002185;1.08e-09;5!UBERON:0005178;1.83e-09;34!UBERON:0002224;1.83e-09;34!UBERON:0005181;5.78e-09;35!UBERON:0000065;1.17e-08;44!UBERON:0001949;1.78e-07;3!UBERON:0005911;1.90e-07;36!UBERON:0000485;4.84e-07;7!UBERON:0000072;8.14e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,3.98e-20,15;UBERON:0001558,3.98e-20,15;UBERON:0003126,1.83e-17,7;UBERON:0001005,1.83e-17,7;UBERON:0004815,4.68e-16,3;UBERON:0002031,4.68e-16,3;UBERON:0000365,5.90e-16,5;UBERON:0005910,2.54e-13,6;UBERON:0004119,2.21e-12,160;UBERON:0000925,2.21e-12,160;UBERON:0006595,2.21e-12,160;UBERON:0003127,6.11e-11,2;UBERON:0000065,7.10e-11,54;UBERON:0005178,2.81e-10,34;UBERON:0002224,2.81e-10,34;UBERON:0001004,3.52e-10,74;UBERON:0005181,6.11e-10,35;UBERON:0002185,8.01e-10,5;UBERON:0005911,5.80e-09,82;UBERON:0001949,1.64e-07,3;UBERON:0008947,3.43e-07,38;UBERON:0003258,3.43e-07,38;UBERON:0000072,5.43e-07,47;UBERON:0004913,9.91e-07,1;UBERON:0003703,9.91e-07,1;UBERON:0001174,9.91e-07,1;UBERON:0004914,9.91e-07,1 | |||
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|short_description=p5@FAM83A | |||
}} |
Revision as of 03:23, 14 September 2013
Short description: | p5@FAM83A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FAM83A_5end |
Coexpression cluster: | C4725_Corneal_Keratinocyte_mesothelioma_Bronchial_Urothelial_papillotubular_Gingival |
Association with transcript: | 72bp_to_ENST00000318462, NM_032899, NM_207006_5end |
EntrezGene: | FAM83A |
HGNC: | 28210 |
UniProt: | Q86UY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.16e-30 | 13 |
endo-epithelial cell | 2.84e-20 | 42 |
transitional epithelial cell | 6.72e-20 | 4 |
urothelial cell | 6.72e-20 | 4 |
epithelial cell of tracheobronchial tree | 1.46e-19 | 9 |
epithelial cell of lower respiratory tract | 1.46e-19 | 9 |
epithelial cell | 5.23e-17 | 253 |
bronchial epithelial cell | 4.68e-16 | 3 |
duct epithelial cell | 2.43e-15 | 3 |
branched duct epithelial cell | 2.43e-15 | 3 |
tracheal epithelial cell | 2.43e-15 | 3 |
tracheoblast | 2.43e-15 | 3 |
endodermal cell | 7.69e-14 | 58 |
general ecto-epithelial cell | 1.62e-12 | 14 |
corneal epithelial cell | 2.59e-11 | 2 |
keratinocyte | 6.70e-10 | 5 |
stratified squamous epithelial cell | 2.55e-08 | 6 |
keratin accumulating cell | 2.55e-08 | 6 |
stratified epithelial cell | 2.55e-08 | 6 |
keratinizing barrier epithelial cell | 2.55e-08 | 6 |
epithelial fate stem cell | 2.55e-08 | 6 |
stratified epithelial stem cell | 2.55e-08 | 6 |
surface ectodermal cell | 2.55e-08 | 6 |
epithelial cell of prostate | 1.44e-07 | 3 |
gingival epithelial cell | 1.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 3.98e-20 | 15 |
lower respiratory tract | 3.98e-20 | 15 |
trachea | 1.83e-17 | 7 |
respiratory airway | 1.83e-17 | 7 |
lower respiratory tract epithelium | 4.68e-16 | 3 |
epithelium of bronchus | 4.68e-16 | 3 |
urothelium | 5.90e-16 | 5 |
transitional epithelium | 2.54e-13 | 6 |
endoderm-derived structure | 2.21e-12 | 160 |
endoderm | 2.21e-12 | 160 |
presumptive endoderm | 2.21e-12 | 160 |
open tracheal system trachea | 6.11e-11 | 2 |
respiratory tract | 7.10e-11 | 54 |
thoracic cavity element | 2.81e-10 | 34 |
thoracic cavity | 2.81e-10 | 34 |
respiratory system | 3.52e-10 | 74 |
thoracic segment organ | 6.11e-10 | 35 |
bronchus | 8.01e-10 | 5 |
endo-epithelium | 5.80e-09 | 82 |
gingival epithelium | 1.64e-07 | 3 |
respiratory primordium | 3.43e-07 | 38 |
endoderm of foregut | 3.43e-07 | 38 |
segment of respiratory tract | 5.43e-07 | 47 |
hepatopancreatic ampulla | 9.91e-07 | 1 |
extrahepatic bile duct | 9.91e-07 | 1 |
common bile duct | 9.91e-07 | 1 |
duodenal papilla | 9.91e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.