FFCP PHASE1:Mm9::chr12:118392629..118392639,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:118392629..118392639,+|id=chr12:118392629..118392639,+|ontology_enrichment_celltype=CL:0000117!2.00e-18!23;CL:0000337!2.00e-18!23;CL:0000540!5.06e-11!33;CL:0000047!5.06e-11!33;CL:0000031!5.06e-11!33;CL:0000404!5.06e-11!33;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0002319!4.96e-08!43;CL:0000221!1.01e-07!44;CL:0000133!1.01e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-23,23;CL:0000337,4.54e-23,23;CL:0000540,1.94e-15,33;CL:0000047,1.94e-15,33;CL:0000031,1.94e-15,33;CL:0000404,1.94e-15,33;CL:0002613,3.45e-13,3;CL:0002610,6.55e-13,3;CL:0000393,9.80e-13,39;CL:0000211,9.80e-13,39;CL:0002614,3.02e-12,3;CL:0002319,2.37e-11,43;CL:0000221,4.81e-11,44;CL:0000133,4.81e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.77e-27!63;UBERON:0000955!6.69e-27!50;UBERON:0006238!6.69e-27!50;UBERON:0002616!5.74e-26!49;UBERON:0003056!5.80e-26!49;UBERON:0001049!6.28e-26!52;UBERON:0005068!6.28e-26!52;UBERON:0006241!6.28e-26!52;UBERON:0007135!6.28e-26!52;UBERON:0002020!9.79e-26!34;UBERON:0001017!3.23e-25!73;UBERON:0005743!3.23e-25!73;UBERON:0000073!3.46e-24!75;UBERON:0001016!3.46e-24!75;UBERON:0003080!2.89e-23!40;UBERON:0002791!3.14e-23!29;UBERON:0003528!3.14e-23!29;UBERON:0001893!3.14e-23!29;UBERON:0002346!4.60e-23!71;UBERON:0003075!4.60e-23!71;UBERON:0007284!4.60e-23!71;UBERON:0002780!4.04e-22!39;UBERON:0001890!4.04e-22!39;UBERON:0006240!4.04e-22!39;UBERON:0004121!3.75e-20!102;UBERON:0000924!3.75e-20!102;UBERON:0006601!3.75e-20!102;UBERON:0007811!1.95e-17!86;UBERON:0002619!2.35e-15!17;UBERON:0000153!6.84e-15!94;UBERON:0000956!1.82e-13!21;UBERON:0001869!1.82e-13!21;UBERON:0000203!1.82e-13!21;UBERON:0002420!1.28e-11!8;UBERON:0007245!1.28e-11!8;UBERON:0010009!1.28e-11!8;UBERON:0010011!1.28e-11!8;UBERON:0000454!1.28e-11!8;UBERON:0002021!4.69e-11!10;UBERON:0000411!4.69e-11!10;UBERON:0001950!4.69e-11!10;UBERON:0002298!1.81e-08!6;UBERON:0000369!8.48e-08!5;UBERON:0002435!8.48e-08!5;UBERON:0000204!8.48e-08!5;UBERON:0010082!8.48e-08!5;UBERON:0000025!9.07e-08!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.17e-26,54;UBERON:0003080,2.60e-25,40;UBERON:0003528,2.04e-24,29;UBERON:0002791,2.04e-24,29;UBERON:0001893,2.04e-24,29;UBERON:0002780,5.27e-23,39;UBERON:0001890,5.27e-23,39;UBERON:0006240,5.27e-23,39;UBERON:0001017,9.47e-23,73;UBERON:0001016,4.72e-22,75;UBERON:0002616,1.27e-21,46;UBERON:0000955,4.24e-21,47;UBERON:0006238,4.24e-21,47;UBERON:0002020,1.85e-20,34;UBERON:0003056,4.08e-20,49;UBERON:0001049,8.80e-19,52;UBERON:0005068,8.80e-19,52;UBERON:0006241,8.80e-19,52;UBERON:0007135,8.80e-19,52;UBERON:0002420,1.02e-17,8;UBERON:0007245,1.02e-17,8;UBERON:0010009,1.02e-17,8;UBERON:0010011,1.02e-17,8;UBERON:0000454,1.02e-17,8;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0002950,1.81e-15,4;UBERON:0001891,1.81e-15,4;UBERON:0009616,1.81e-15,4;UBERON:0010286,1.81e-15,4;UBERON:0002346,1.08e-14,64;UBERON:0003075,1.08e-14,64;UBERON:0007284,1.08e-14,64;UBERON:0002021,5.86e-14,10;UBERON:0000411,5.86e-14,10;UBERON:0001950,5.86e-14,10;UBERON:0004684,6.55e-13,3;UBERON:0002275,6.55e-13,3;UBERON:0010371,1.67e-12,73;UBERON:0002038,3.02e-12,3;UBERON:0009663,3.02e-12,3;UBERON:0009661,3.02e-12,3;UBERON:0000125,3.02e-12,3;UBERON:0002308,3.02e-12,3;UBERON:0000956,6.03e-11,21;UBERON:0001869,6.03e-11,21;UBERON:0000203,6.03e-11,21;UBERON:0002619,1.01e-10,17;UBERON:0010314,2.76e-09,92;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0000025,6.82e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.367472397644862,0.479227355091182,1.83843757322004,3.30347642998166,2.042997409363,1.68967186581868,1.84640802822271,2.56165402086747,2.6045668527838,2.23346399201105,1.68828783009504,1.22238598221448,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.457500602818626,0.879580464790051,1.21677024134594,1.02286182932132,1.0389402227978,1.46017136760982,0,0,0,0,0.650602214813519,0,0.540186389416048,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.905510786479282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,2.02506750069542,0.45032120322422,2.26571204492102,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0,0.644613162144895,0,0,0|short_description=p@chr12:118392629..118392639,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:118392629..118392639,+ | |||
|description=CAGE_peak_at_chr12:118392629..118392639,+ | |||
|id=chr12:118392629..118392639,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.00e-18!23;CL:0000337!2.00e-18!23;CL:0000540!5.06e-11!33;CL:0000047!5.06e-11!33;CL:0000031!5.06e-11!33;CL:0000404!5.06e-11!33;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0002319!4.96e-08!43;CL:0000221!1.01e-07!44;CL:0000133!1.01e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-23,23;CL:0000337,4.54e-23,23;CL:0000540,1.94e-15,33;CL:0000047,1.94e-15,33;CL:0000031,1.94e-15,33;CL:0000404,1.94e-15,33;CL:0002613,3.45e-13,3;CL:0002610,6.55e-13,3;CL:0000393,9.80e-13,39;CL:0000211,9.80e-13,39;CL:0002614,3.02e-12,3;CL:0002319,2.37e-11,43;CL:0000221,4.81e-11,44;CL:0000133,4.81e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.77e-27!63;UBERON:0000955!6.69e-27!50;UBERON:0006238!6.69e-27!50;UBERON:0002616!5.74e-26!49;UBERON:0003056!5.80e-26!49;UBERON:0001049!6.28e-26!52;UBERON:0005068!6.28e-26!52;UBERON:0006241!6.28e-26!52;UBERON:0007135!6.28e-26!52;UBERON:0002020!9.79e-26!34;UBERON:0001017!3.23e-25!73;UBERON:0005743!3.23e-25!73;UBERON:0000073!3.46e-24!75;UBERON:0001016!3.46e-24!75;UBERON:0003080!2.89e-23!40;UBERON:0002791!3.14e-23!29;UBERON:0003528!3.14e-23!29;UBERON:0001893!3.14e-23!29;UBERON:0002346!4.60e-23!71;UBERON:0003075!4.60e-23!71;UBERON:0007284!4.60e-23!71;UBERON:0002780!4.04e-22!39;UBERON:0001890!4.04e-22!39;UBERON:0006240!4.04e-22!39;UBERON:0004121!3.75e-20!102;UBERON:0000924!3.75e-20!102;UBERON:0006601!3.75e-20!102;UBERON:0007811!1.95e-17!86;UBERON:0002619!2.35e-15!17;UBERON:0000153!6.84e-15!94;UBERON:0000956!1.82e-13!21;UBERON:0001869!1.82e-13!21;UBERON:0000203!1.82e-13!21;UBERON:0002420!1.28e-11!8;UBERON:0007245!1.28e-11!8;UBERON:0010009!1.28e-11!8;UBERON:0010011!1.28e-11!8;UBERON:0000454!1.28e-11!8;UBERON:0002021!4.69e-11!10;UBERON:0000411!4.69e-11!10;UBERON:0001950!4.69e-11!10;UBERON:0002298!1.81e-08!6;UBERON:0000369!8.48e-08!5;UBERON:0002435!8.48e-08!5;UBERON:0000204!8.48e-08!5;UBERON:0010082!8.48e-08!5;UBERON:0000025!9.07e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.17e-26,54;UBERON:0003080,2.60e-25,40;UBERON:0003528,2.04e-24,29;UBERON:0002791,2.04e-24,29;UBERON:0001893,2.04e-24,29;UBERON:0002780,5.27e-23,39;UBERON:0001890,5.27e-23,39;UBERON:0006240,5.27e-23,39;UBERON:0001017,9.47e-23,73;UBERON:0001016,4.72e-22,75;UBERON:0002616,1.27e-21,46;UBERON:0000955,4.24e-21,47;UBERON:0006238,4.24e-21,47;UBERON:0002020,1.85e-20,34;UBERON:0003056,4.08e-20,49;UBERON:0001049,8.80e-19,52;UBERON:0005068,8.80e-19,52;UBERON:0006241,8.80e-19,52;UBERON:0007135,8.80e-19,52;UBERON:0002420,1.02e-17,8;UBERON:0007245,1.02e-17,8;UBERON:0010009,1.02e-17,8;UBERON:0010011,1.02e-17,8;UBERON:0000454,1.02e-17,8;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0002950,1.81e-15,4;UBERON:0001891,1.81e-15,4;UBERON:0009616,1.81e-15,4;UBERON:0010286,1.81e-15,4;UBERON:0002346,1.08e-14,64;UBERON:0003075,1.08e-14,64;UBERON:0007284,1.08e-14,64;UBERON:0002021,5.86e-14,10;UBERON:0000411,5.86e-14,10;UBERON:0001950,5.86e-14,10;UBERON:0004684,6.55e-13,3;UBERON:0002275,6.55e-13,3;UBERON:0010371,1.67e-12,73;UBERON:0002038,3.02e-12,3;UBERON:0009663,3.02e-12,3;UBERON:0009661,3.02e-12,3;UBERON:0000125,3.02e-12,3;UBERON:0002308,3.02e-12,3;UBERON:0000956,6.03e-11,21;UBERON:0001869,6.03e-11,21;UBERON:0000203,6.03e-11,21;UBERON:0002619,1.01e-10,17;UBERON:0010314,2.76e-09,92;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0000025,6.82e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.367472397644862,0.479227355091182,1.83843757322004,3.30347642998166,2.042997409363,1.68967186581868,1.84640802822271,2.56165402086747,2.6045668527838,2.23346399201105,1.68828783009504,1.22238598221448,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.457500602818626,0.879580464790051,1.21677024134594,1.02286182932132,1.0389402227978,1.46017136760982,0,0,0,0,0.650602214813519,0,0.540186389416048,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.905510786479282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,2.02506750069542,0.45032120322422,2.26571204492102,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0,0,0,0.644613162144895,0,0,0 | |||
|short_description=p@chr12:118392629..118392639,+ | |||
}} |
Latest revision as of 20:36, 4 August 2015
Short description: | p@chr12:118392629..118392639, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:118392629..118392639, + |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.54e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-23 | 23 |
neuron | 1.94e-15 | 33 |
neuronal stem cell | 1.94e-15 | 33 |
neuroblast | 1.94e-15 | 33 |
electrically signaling cell | 1.94e-15 | 33 |
striatum neuron | 3.45e-13 | 3 |
raphe nuclei neuron | 6.55e-13 | 3 |
electrically responsive cell | 9.80e-13 | 39 |
electrically active cell | 9.80e-13 | 39 |
neuron of the substantia nigra | 3.02e-12 | 3 |
neural cell | 2.37e-11 | 43 |
ectodermal cell | 4.81e-11 | 44 |
neurectodermal cell | 4.81e-11 | 44 |