FFCP PHASE1:Mm9::chr12:30213392..30213414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17933|HGNC=|MCL_coexpression_id=13|UniProt=D3Z1P7,E9QNV0,Q0VGN2,E9QLD2,Q33DP0|association_with_transcript=143bp_to_ENSMUST00000049784,ENSMUST00000092649,NM_001093775,NM_001093778,NM_008666,uc007ngd.1,uc007nge.1,uc007ngf.1_5end|description=CAGE_peak_8_at_Myt1l_5end|id=chr12:30213392..30213414,+|ontology_enrichment_celltype=CL:0000117!1.29e-13!23;CL:0000337!1.29e-13!23;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.43e-08!39;CL:0000211!4.43e-08!39;CL:0002609!5.80e-07!6;CL:0000221!6.13e-07!44;CL:0000133!6.13e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-13,23;CL:0000337,1.12e-13,23;CL:0002609,9.82e-10,6;CL:0000540,1.16e-08,33;CL:0000047,1.16e-08,33;CL:0000031,1.16e-08,33;CL:0000404,1.16e-08,33;CL:0000120,3.76e-07,3;CL:0002613,3.96e-07,3;CL:0000393,6.64e-07,39;CL:0000211,6.64e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.38e-27!71;UBERON:0003075!3.38e-27!71;UBERON:0007284!3.38e-27!71;UBERON:0001049!2.29e-26!52;UBERON:0005068!2.29e-26!52;UBERON:0006241!2.29e-26!52;UBERON:0007135!2.29e-26!52;UBERON:0001017!1.43e-25!73;UBERON:0005743!1.43e-25!73;UBERON:0000955!3.57e-25!50;UBERON:0006238!3.57e-25!50;UBERON:0000073!2.16e-24!75;UBERON:0001016!2.16e-24!75;UBERON:0002616!4.38e-24!49;UBERON:0000033!5.69e-24!63;UBERON:0004121!1.01e-23!102;UBERON:0000924!1.01e-23!102;UBERON:0006601!1.01e-23!102;UBERON:0002020!5.38e-23!34;UBERON:0003056!8.64e-23!49;UBERON:0003080!1.33e-22!40;UBERON:0002780!1.38e-21!39;UBERON:0001890!1.38e-21!39;UBERON:0006240!1.38e-21!39;UBERON:0002791!5.07e-21!29;UBERON:0003528!5.07e-21!29;UBERON:0001893!5.07e-21!29;UBERON:0000956!2.20e-16!21;UBERON:0001869!2.20e-16!21;UBERON:0000203!2.20e-16!21;UBERON:0007811!2.92e-13!86;UBERON:0002619!1.88e-12!17;UBERON:0000153!7.26e-11!94;UBERON:0002021!3.43e-10!10;UBERON:0000411!3.43e-10!10;UBERON:0001950!3.43e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.83e-31,34;UBERON:0003528,2.85e-31,29;UBERON:0002791,2.85e-31,29;UBERON:0001893,2.85e-31,29;UBERON:0003080,9.76e-29,40;UBERON:0000955,2.57e-28,47;UBERON:0006238,2.57e-28,47;UBERON:0002780,7.27e-27,39;UBERON:0001890,7.27e-27,39;UBERON:0006240,7.27e-27,39;UBERON:0001049,8.60e-27,52;UBERON:0005068,8.60e-27,52;UBERON:0006241,8.60e-27,52;UBERON:0007135,8.60e-27,52;UBERON:0002616,2.05e-26,46;UBERON:0003056,2.56e-26,49;UBERON:0000073,1.48e-25,54;UBERON:0000956,1.82e-25,21;UBERON:0001869,1.82e-25,21;UBERON:0000203,1.82e-25,21;UBERON:0001017,4.32e-24,73;UBERON:0002346,6.47e-24,64;UBERON:0003075,6.47e-24,64;UBERON:0007284,6.47e-24,64;UBERON:0001016,2.96e-23,75;UBERON:0010371,4.07e-20,73;UBERON:0004121,1.91e-19,95;UBERON:0000924,1.91e-19,95;UBERON:0006601,1.91e-19,95;UBERON:0002619,1.49e-17,17;UBERON:0010314,1.53e-14,92;UBERON:0002021,1.09e-13,10;UBERON:0000411,1.09e-13,10;UBERON:0001950,1.09e-13,10;UBERON:0000369,1.45e-11,5;UBERON:0002435,1.45e-11,5;UBERON:0000204,1.45e-11,5;UBERON:0010082,1.45e-11,5;UBERON:0000025,1.07e-08,114;UBERON:0004111,1.02e-07,122;UBERON:0002420,4.50e-07,8;UBERON:0007245,4.50e-07,8;UBERON:0010009,4.50e-07,8;UBERON:0010011,4.50e-07,8;UBERON:0000454,4.50e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,3.42175720617976,2.16009501330705,1.68259969081106,0.856952953211411,0,1.83736198822431,2.1086003624012,0.919218786610021,0,0.766124028511126,0.307213066512487,2.2420668914133,1.28082701043374,1.56274011167028,0,0.56276261003168,0.30559649555362,0.589257170947335,1.28134512719193,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0,0,0,2.54644086988199,3.20250421973039,3.14135880282161,2.78118912307642,3.3243009452943,2.28566849015516,1.94689515681309,0,0,0,0,0,0,0,0.753524089178575,1.02054748726992,1.15302348256365,0.843315521037559,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.42489833230923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.920650473014354,2.86447756719698,3.78077001156113,2.05524755931193,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,1.55328093525546,0.103787347584177,0,1.53660245178721,0.243106717068294,0,0.735374033800057,0.888986911206461,0.824140228955577,0.64183841918363,0,0.25347929989024,1.50901073108861,0.468207537349412,0.89635213366817,0.631790158511746,0.952587382566147,0.463537303779422,1.35036454324594,1.23625770240992,0.588795680537589,1.37147700954166,0.887379030796687,1.1921809497366,0.872078499793971,0.846984423737976,0.761531471025089,1.09756783723664,0,0.814824683075171,0.561142271657738,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p8@Myt1l}} | ||
|EntrezGene=17933 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=D3Z1P7,E9QNV0,Q0VGN2,E9QLD2,Q33DP0 | |||
|association_with_transcript=143bp_to_ENSMUST00000049784,ENSMUST00000092649,NM_001093775,NM_001093778,NM_008666,uc007ngd.1,uc007nge.1,uc007ngf.1_5end | |||
|description=CAGE_peak_8_at_Myt1l_5end | |||
|id=chr12:30213392..30213414,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-13!23;CL:0000337!1.29e-13!23;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.43e-08!39;CL:0000211!4.43e-08!39;CL:0002609!5.80e-07!6;CL:0000221!6.13e-07!44;CL:0000133!6.13e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-13,23;CL:0000337,1.12e-13,23;CL:0002609,9.82e-10,6;CL:0000540,1.16e-08,33;CL:0000047,1.16e-08,33;CL:0000031,1.16e-08,33;CL:0000404,1.16e-08,33;CL:0000120,3.76e-07,3;CL:0002613,3.96e-07,3;CL:0000393,6.64e-07,39;CL:0000211,6.64e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.38e-27!71;UBERON:0003075!3.38e-27!71;UBERON:0007284!3.38e-27!71;UBERON:0001049!2.29e-26!52;UBERON:0005068!2.29e-26!52;UBERON:0006241!2.29e-26!52;UBERON:0007135!2.29e-26!52;UBERON:0001017!1.43e-25!73;UBERON:0005743!1.43e-25!73;UBERON:0000955!3.57e-25!50;UBERON:0006238!3.57e-25!50;UBERON:0000073!2.16e-24!75;UBERON:0001016!2.16e-24!75;UBERON:0002616!4.38e-24!49;UBERON:0000033!5.69e-24!63;UBERON:0004121!1.01e-23!102;UBERON:0000924!1.01e-23!102;UBERON:0006601!1.01e-23!102;UBERON:0002020!5.38e-23!34;UBERON:0003056!8.64e-23!49;UBERON:0003080!1.33e-22!40;UBERON:0002780!1.38e-21!39;UBERON:0001890!1.38e-21!39;UBERON:0006240!1.38e-21!39;UBERON:0002791!5.07e-21!29;UBERON:0003528!5.07e-21!29;UBERON:0001893!5.07e-21!29;UBERON:0000956!2.20e-16!21;UBERON:0001869!2.20e-16!21;UBERON:0000203!2.20e-16!21;UBERON:0007811!2.92e-13!86;UBERON:0002619!1.88e-12!17;UBERON:0000153!7.26e-11!94;UBERON:0002021!3.43e-10!10;UBERON:0000411!3.43e-10!10;UBERON:0001950!3.43e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.83e-31,34;UBERON:0003528,2.85e-31,29;UBERON:0002791,2.85e-31,29;UBERON:0001893,2.85e-31,29;UBERON:0003080,9.76e-29,40;UBERON:0000955,2.57e-28,47;UBERON:0006238,2.57e-28,47;UBERON:0002780,7.27e-27,39;UBERON:0001890,7.27e-27,39;UBERON:0006240,7.27e-27,39;UBERON:0001049,8.60e-27,52;UBERON:0005068,8.60e-27,52;UBERON:0006241,8.60e-27,52;UBERON:0007135,8.60e-27,52;UBERON:0002616,2.05e-26,46;UBERON:0003056,2.56e-26,49;UBERON:0000073,1.48e-25,54;UBERON:0000956,1.82e-25,21;UBERON:0001869,1.82e-25,21;UBERON:0000203,1.82e-25,21;UBERON:0001017,4.32e-24,73;UBERON:0002346,6.47e-24,64;UBERON:0003075,6.47e-24,64;UBERON:0007284,6.47e-24,64;UBERON:0001016,2.96e-23,75;UBERON:0010371,4.07e-20,73;UBERON:0004121,1.91e-19,95;UBERON:0000924,1.91e-19,95;UBERON:0006601,1.91e-19,95;UBERON:0002619,1.49e-17,17;UBERON:0010314,1.53e-14,92;UBERON:0002021,1.09e-13,10;UBERON:0000411,1.09e-13,10;UBERON:0001950,1.09e-13,10;UBERON:0000369,1.45e-11,5;UBERON:0002435,1.45e-11,5;UBERON:0000204,1.45e-11,5;UBERON:0010082,1.45e-11,5;UBERON:0000025,1.07e-08,114;UBERON:0004111,1.02e-07,122;UBERON:0002420,4.50e-07,8;UBERON:0007245,4.50e-07,8;UBERON:0010009,4.50e-07,8;UBERON:0010011,4.50e-07,8;UBERON:0000454,4.50e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,3.42175720617976,2.16009501330705,1.68259969081106,0.856952953211411,0,1.83736198822431,2.1086003624012,0.919218786610021,0,0.766124028511126,0.307213066512487,2.2420668914133,1.28082701043374,1.56274011167028,0,0.56276261003168,0.30559649555362,0.589257170947335,1.28134512719193,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0,0,0,2.54644086988199,3.20250421973039,3.14135880282161,2.78118912307642,3.3243009452943,2.28566849015516,1.94689515681309,0,0,0,0,0,0,0,0.753524089178575,1.02054748726992,1.15302348256365,0.843315521037559,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,4.42489833230923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.920650473014354,2.86447756719698,3.78077001156113,2.05524755931193,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,1.55328093525546,0.103787347584177,0,1.53660245178721,0.243106717068294,0,0.735374033800057,0.888986911206461,0.824140228955577,0.64183841918363,0,0.25347929989024,1.50901073108861,0.468207537349412,0.89635213366817,0.631790158511746,0.952587382566147,0.463537303779422,1.35036454324594,1.23625770240992,0.588795680537589,1.37147700954166,0.887379030796687,1.1921809497366,0.872078499793971,0.846984423737976,0.761531471025089,1.09756783723664,0,0.814824683075171,0.561142271657738,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p8@Myt1l | |||
}} |
Revision as of 22:40, 12 September 2013
Short description: | p8@Myt1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Myt1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 143bp_to_ENSMUST00000049784, ENSMUST00000092649, NM_001093775, NM_001093778, NM_008666, uc007ngd.1, uc007nge.1, uc007ngf.1_5end |
EntrezGene: | Myt1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.12e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-13 | 23 |
neuron of cerebral cortex | 9.82e-10 | 6 |
neuron | 1.16e-08 | 33 |
neuronal stem cell | 1.16e-08 | 33 |
neuroblast | 1.16e-08 | 33 |
electrically signaling cell | 1.16e-08 | 33 |
granule cell | 3.76e-07 | 3 |
striatum neuron | 3.96e-07 | 3 |
electrically responsive cell | 6.64e-07 | 39 |
electrically active cell | 6.64e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.