FFCP PHASE1:Mm9::chr13:100192647..100192659,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100192647..100192659,-|id=chr13:100192647..100192659,-|ontology_enrichment_celltype=CL:0000540!1.34e-16!33;CL:0000047!1.34e-16!33;CL:0000031!1.34e-16!33;CL:0000404!1.34e-16!33;CL:0000117!2.08e-15!23;CL:0000337!2.08e-15!23;CL:0002319!3.63e-14!43;CL:0000221!1.56e-13!44;CL:0000133!1.56e-13!44;CL:0000393!8.44e-13!39;CL:0000211!8.44e-13!39;CL:0000055!6.99e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-34,23;CL:0000337,4.84e-34,23;CL:0000540,9.89e-23,33;CL:0000047,9.89e-23,33;CL:0000031,9.89e-23,33;CL:0000404,9.89e-23,33;CL:0000393,1.00e-18,39;CL:0000211,1.00e-18,39;CL:0002319,1.12e-16,43;CL:0000221,3.19e-16,44;CL:0000133,3.19e-16,44;CL:0002612,3.32e-11,3;CL:0000120,4.51e-11,3;CL:0002613,8.26e-11,3;CL:0002321,5.65e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.09e-27!75;UBERON:0001016!4.09e-27!75;UBERON:0001017!2.31e-26!73;UBERON:0005743!2.31e-26!73;UBERON:0002346!3.53e-22!71;UBERON:0003075!3.53e-22!71;UBERON:0007284!3.53e-22!71;UBERON:0004121!5.84e-22!102;UBERON:0000924!5.84e-22!102;UBERON:0006601!5.84e-22!102;UBERON:0001049!1.38e-21!52;UBERON:0005068!1.38e-21!52;UBERON:0006241!1.38e-21!52;UBERON:0007135!1.38e-21!52;UBERON:0000955!1.08e-19!50;UBERON:0006238!1.08e-19!50;UBERON:0002616!4.27e-19!49;UBERON:0000033!5.37e-19!63;UBERON:0003056!3.95e-17!49;UBERON:0002020!4.50e-17!34;UBERON:0003080!2.06e-16!40;UBERON:0002780!8.46e-16!39;UBERON:0001890!8.46e-16!39;UBERON:0006240!8.46e-16!39;UBERON:0002791!1.05e-14!29;UBERON:0003528!1.05e-14!29;UBERON:0001893!1.05e-14!29;UBERON:0007811!1.65e-09!86;UBERON:0000956!6.56e-09!21;UBERON:0001869!6.56e-09!21;UBERON:0000203!6.56e-09!21;UBERON:0000153!2.99e-08!94;UBERON:0002420!1.75e-07!8;UBERON:0007245!1.75e-07!8;UBERON:0010009!1.75e-07!8;UBERON:0010011!1.75e-07!8;UBERON:0000454!1.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.17e-30,34;UBERON:0001017,6.53e-26,73;UBERON:0001016,4.25e-25,75;UBERON:0000073,6.29e-25,54;UBERON:0003528,6.34e-25,29;UBERON:0002791,6.34e-25,29;UBERON:0001893,6.34e-25,29;UBERON:0001049,1.70e-23,52;UBERON:0005068,1.70e-23,52;UBERON:0006241,1.70e-23,52;UBERON:0007135,1.70e-23,52;UBERON:0004121,7.79e-19,95;UBERON:0000924,7.79e-19,95;UBERON:0006601,7.79e-19,95;UBERON:0002346,2.59e-18,64;UBERON:0003075,2.59e-18,64;UBERON:0007284,2.59e-18,64;UBERON:0002780,1.04e-17,39;UBERON:0001890,1.04e-17,39;UBERON:0006240,1.04e-17,39;UBERON:0003080,3.47e-17,40;UBERON:0002616,1.25e-16,46;UBERON:0000955,3.34e-16,47;UBERON:0006238,3.34e-16,47;UBERON:0010371,1.53e-15,73;UBERON:0002420,3.40e-14,8;UBERON:0007245,3.40e-14,8;UBERON:0010009,3.40e-14,8;UBERON:0010011,3.40e-14,8;UBERON:0000454,3.40e-14,8;UBERON:0003056,1.94e-13,49;UBERON:0000956,3.04e-13,21;UBERON:0001869,3.04e-13,21;UBERON:0000203,3.04e-13,21;UBERON:0010314,1.82e-11,92;UBERON:0002257,3.32e-11,3;UBERON:0000369,7.26e-11,5;UBERON:0002435,7.26e-11,5;UBERON:0000204,7.26e-11,5;UBERON:0010082,7.26e-11,5;UBERON:0002619,8.44e-11,17;UBERON:0002240,1.64e-09,6;UBERON:0005174,1.64e-09,6;UBERON:0001137,1.64e-09,6;UBERON:0000025,1.92e-08,114;UBERON:0002021,6.64e-08,10;UBERON:0000411,6.64e-08,10;UBERON:0001950,6.64e-08,10;UBERON:0004111,1.30e-07,122;UBERON:0003076,5.96e-07,12;UBERON:0003057,5.96e-07,12;UBERON:0001948,7.18e-07,5;UBERON:0002315,7.18e-07,5;UBERON:0011216,9.72e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,1.21505344498522,0.630974884054146,0,0.883474163806454,0.857435594504678,2.20444583341944,0.919218786610021,0,1.78762273319263,1.99688493233117,1.05509030184155,5.6722339033494,5.2091337055676,1.95428099300967,1.12552522006336,0.61119299110724,2.65165726926301,3.27454865837937,2.42319279572891,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,1.50785222535437,0.695297280769106,0.767146371990992,0.83115217823824,0.973447578406546,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,1.13195073617213,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.75817529888305,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.822745103010605,0,0,0,0,0,0,0,0,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,2.92150409984269,0,0,0,0.900642406448441,1.35942722695261,1.55328093525546,1.03787347584177,0.399024873401031,0,0.486213434136588,0.628839487883947,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.561849044819294,0.192075457214608,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,1.06485483695602,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,0.689531376628944,0.409231043169689,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0|short_description=p@chr13:100192647..100192659,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100192647..100192659,- | |||
|description=CAGE_peak_at_chr13:100192647..100192659,- | |||
|id=chr13:100192647..100192659,- | |||
|ontology_enrichment_celltype=CL:0000540!1.34e-16!33;CL:0000047!1.34e-16!33;CL:0000031!1.34e-16!33;CL:0000404!1.34e-16!33;CL:0000117!2.08e-15!23;CL:0000337!2.08e-15!23;CL:0002319!3.63e-14!43;CL:0000221!1.56e-13!44;CL:0000133!1.56e-13!44;CL:0000393!8.44e-13!39;CL:0000211!8.44e-13!39;CL:0000055!6.99e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-34,23;CL:0000337,4.84e-34,23;CL:0000540,9.89e-23,33;CL:0000047,9.89e-23,33;CL:0000031,9.89e-23,33;CL:0000404,9.89e-23,33;CL:0000393,1.00e-18,39;CL:0000211,1.00e-18,39;CL:0002319,1.12e-16,43;CL:0000221,3.19e-16,44;CL:0000133,3.19e-16,44;CL:0002612,3.32e-11,3;CL:0000120,4.51e-11,3;CL:0002613,8.26e-11,3;CL:0002321,5.65e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.09e-27!75;UBERON:0001016!4.09e-27!75;UBERON:0001017!2.31e-26!73;UBERON:0005743!2.31e-26!73;UBERON:0002346!3.53e-22!71;UBERON:0003075!3.53e-22!71;UBERON:0007284!3.53e-22!71;UBERON:0004121!5.84e-22!102;UBERON:0000924!5.84e-22!102;UBERON:0006601!5.84e-22!102;UBERON:0001049!1.38e-21!52;UBERON:0005068!1.38e-21!52;UBERON:0006241!1.38e-21!52;UBERON:0007135!1.38e-21!52;UBERON:0000955!1.08e-19!50;UBERON:0006238!1.08e-19!50;UBERON:0002616!4.27e-19!49;UBERON:0000033!5.37e-19!63;UBERON:0003056!3.95e-17!49;UBERON:0002020!4.50e-17!34;UBERON:0003080!2.06e-16!40;UBERON:0002780!8.46e-16!39;UBERON:0001890!8.46e-16!39;UBERON:0006240!8.46e-16!39;UBERON:0002791!1.05e-14!29;UBERON:0003528!1.05e-14!29;UBERON:0001893!1.05e-14!29;UBERON:0007811!1.65e-09!86;UBERON:0000956!6.56e-09!21;UBERON:0001869!6.56e-09!21;UBERON:0000203!6.56e-09!21;UBERON:0000153!2.99e-08!94;UBERON:0002420!1.75e-07!8;UBERON:0007245!1.75e-07!8;UBERON:0010009!1.75e-07!8;UBERON:0010011!1.75e-07!8;UBERON:0000454!1.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.17e-30,34;UBERON:0001017,6.53e-26,73;UBERON:0001016,4.25e-25,75;UBERON:0000073,6.29e-25,54;UBERON:0003528,6.34e-25,29;UBERON:0002791,6.34e-25,29;UBERON:0001893,6.34e-25,29;UBERON:0001049,1.70e-23,52;UBERON:0005068,1.70e-23,52;UBERON:0006241,1.70e-23,52;UBERON:0007135,1.70e-23,52;UBERON:0004121,7.79e-19,95;UBERON:0000924,7.79e-19,95;UBERON:0006601,7.79e-19,95;UBERON:0002346,2.59e-18,64;UBERON:0003075,2.59e-18,64;UBERON:0007284,2.59e-18,64;UBERON:0002780,1.04e-17,39;UBERON:0001890,1.04e-17,39;UBERON:0006240,1.04e-17,39;UBERON:0003080,3.47e-17,40;UBERON:0002616,1.25e-16,46;UBERON:0000955,3.34e-16,47;UBERON:0006238,3.34e-16,47;UBERON:0010371,1.53e-15,73;UBERON:0002420,3.40e-14,8;UBERON:0007245,3.40e-14,8;UBERON:0010009,3.40e-14,8;UBERON:0010011,3.40e-14,8;UBERON:0000454,3.40e-14,8;UBERON:0003056,1.94e-13,49;UBERON:0000956,3.04e-13,21;UBERON:0001869,3.04e-13,21;UBERON:0000203,3.04e-13,21;UBERON:0010314,1.82e-11,92;UBERON:0002257,3.32e-11,3;UBERON:0000369,7.26e-11,5;UBERON:0002435,7.26e-11,5;UBERON:0000204,7.26e-11,5;UBERON:0010082,7.26e-11,5;UBERON:0002619,8.44e-11,17;UBERON:0002240,1.64e-09,6;UBERON:0005174,1.64e-09,6;UBERON:0001137,1.64e-09,6;UBERON:0000025,1.92e-08,114;UBERON:0002021,6.64e-08,10;UBERON:0000411,6.64e-08,10;UBERON:0001950,6.64e-08,10;UBERON:0004111,1.30e-07,122;UBERON:0003076,5.96e-07,12;UBERON:0003057,5.96e-07,12;UBERON:0001948,7.18e-07,5;UBERON:0002315,7.18e-07,5;UBERON:0011216,9.72e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,1.21505344498522,0.630974884054146,0,0.883474163806454,0.857435594504678,2.20444583341944,0.919218786610021,0,1.78762273319263,1.99688493233117,1.05509030184155,5.6722339033494,5.2091337055676,1.95428099300967,1.12552522006336,0.61119299110724,2.65165726926301,3.27454865837937,2.42319279572891,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,1.50785222535437,0.695297280769106,0.767146371990992,0.83115217823824,0.973447578406546,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,1.13195073617213,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.75817529888305,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.822745103010605,0,0,0,0,0,0,0,0,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,2.92150409984269,0,0,0,0.900642406448441,1.35942722695261,1.55328093525546,1.03787347584177,0.399024873401031,0,0.486213434136588,0.628839487883947,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.561849044819294,0.192075457214608,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,1.06485483695602,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,0.689531376628944,0.409231043169689,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr13:100192647..100192659,- | |||
}} |
Latest revision as of 12:13, 5 August 2015
Short description: | p@chr13:100192647..100192659, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100192647..100192659, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.84e-34 | 23 |
neuroblast (sensu Vertebrata) | 4.84e-34 | 23 |
neuron | 9.89e-23 | 33 |
neuronal stem cell | 9.89e-23 | 33 |
neuroblast | 9.89e-23 | 33 |
electrically signaling cell | 9.89e-23 | 33 |
electrically responsive cell | 1.00e-18 | 39 |
electrically active cell | 1.00e-18 | 39 |
neural cell | 1.12e-16 | 43 |
ectodermal cell | 3.19e-16 | 44 |
neurectodermal cell | 3.19e-16 | 44 |
neuron of the ventral spinal cord | 3.32e-11 | 3 |
granule cell | 4.51e-11 | 3 |
striatum neuron | 8.26e-11 | 3 |
embryonic cell | 5.65e-09 | 70 |