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Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant102
- db :UNIPROBE
- Id :Tcfap2c_secondary
- name :SCI09
- score :0.931218572863686
- External refs:
- EntrezGene:7022
UniProt:7022
- EntrezGene:7022
Motif matrix
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P0 | A | C | G | T | 1 | 0.203042542693386 | 0.348070847944292 | 0.22739927765076 | 0.221487331711562 | 2 | 0.179290851311518 | 0.396392209587896 | 0.144382645510149 | 0.279934293590437 | 3 | 0.0934213023233605 | 0.0335400765975422 | 0.859004506104327 | 0.0140341149747703 | 4 | 0.181373260546483 | 0.693723610396897 | 0.0314813558118543 | 0.0934217732447653 | 5 | 0.0190649611331392 | 0.840720471159023 | 0.0116218397110397 | 0.128592727996798 | 6 | 0.197421030257436 | 0.501099719576575 | 0.0876063470771181 | 0.213872903088871 | 7 | 0.457285657873905 | 0.0633045316311839 | 0.239499172224549 | 0.239910638270362 | 8 | 0.508984232789901 | 0.143324545526459 | 0.116228200609983 | 0.231463021073657 | 9 | 0.213872903088871 | 0.0876063470771181 | 0.501099719576575 | 0.197421030257436 | 10 | 0.128592727996798 | 0.0116218397110397 | 0.840720471159023 | 0.0190649611331392 | 11 | 0.0934217732447653 | 0.0314813558118543 | 0.693723610396897 | 0.181373260546483 | 12 | 0.0140341149747703 | 0.859004506104327 | 0.0335400765975422 | 0.0934213023233605 | 13 | 0.477740804768856 | 0.0594251450807427 | 0.165356261032984 | 0.297477789117417 | 14 | 0.278658202462179 | 0.136010905055746 | 0.311291442031476 | 0.2740394504506 |
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Sub Motif Members