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Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant21
- db :HOCOMOCO
- Id :E2F6_f1
- name :
- score :4.311809455108847
- External refs:
- EntrezGene:1876
UniProt:1876
- EntrezGene:1876
Motif matrix
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P0 | A | C | G | T | 1 | 412.42094645162337 | 313.572548752632 | 552.5283038649173 | 585.4530962704173 | 2 | 376.13240900122037 | 119.75790134565906 | 858.4765685302847 | 509.6080164624256 | 3 | 275.34930148375724 | 219.980961284091 | 1341.1068385437002 | 27.53779402804133 | 4 | 47.37175175588746 | 52.64447242892481 | 1752.3408659783993 | 11.617805176378402 | 5 | 215.9810760179416 | 1598.6619010391512 | 4.16217178052669 | 45.169746501969726 | 6 | 107.88234699938566 | 53.93640036691704 | 1657.431893863728 | 44.72425410955855 | 7 | 15.996358976076202 | 120.92572783147958 | 1712.030168642227 | 15.02263988980619 | 8 | 19.165719139229644 | 18.048806069684545 | 1807.4737316277906 | 19.28663850288406 | 9 | 1506.370335470995 | 5.874135402792257 | 348.004198812134 | 3.7262256536672367 | 10 | 1086.347379551729 | 97.17461913893277 | 669.1437540587203 | 11.30914259020784 | 11 | 484.1865887805356 | 318.3870486791885 | 967.685568959153 | 93.71568892071214 | 12 | 347.27723032704864 | 415.1352679568138 | 900.8457996548988 | 200.71659740082683 |
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Sub Motif Members