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Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant31
- db :HOCOMOCO
- Id :NFYB_f1
- name :
- score :0.7417708537241554
- External refs:
- EntrezGene:4801
UniProt:4801
- EntrezGene:4801
| Motif matrix
|
| P0 | A | C | G | T | | 1 | 157.87160150624615 | 509.80880259053333 | 122.15675650628955 | 358.001415437191 | | 2 | 63.073280527400975 | 232.630134580975 | 338.14257040863646 | 513.9925905232477 | | 3 | 58.624000820825955 | 755.3575218127127 | 194.23083090156493 | 139.62622250515727 | | 4 | 13.4023460548972 | 340.19051694141666 | 52.50671467995065 | 741.7389983639963 | | 5 | 47.39152284369253 | 384.3920770616204 | 656.4566098883835 | 59.59836624656405 | | 6 | 1131.364549114232 | 6.7639231456988 | 5.2873780575452995 | 4.422725722785539 | | 7 | 0.08780686291924575 | 3.49541559908934 | 9.370578870810904 | 1134.8847747074424 | | 8 | 0.5984915776575795 | 0.0 | 7.319564974251791 | 1139.9205194883518 | | 9 | 1.4870970304003526 | 6.819965116732662 | 1138.1757759296559 | 1.3557379634731586 | | 10 | 1.344498685019489 | 5.498886634723806 | 1140.195797040502 | 0.7993936800168141 | | 11 | 100.73697462046164 | 653.626812695205 | 53.68240011566178 | 339.79238860893236 | | 12 | 30.42649505891509 | 412.0353275518192 | 45.59179396742379 | 659.7849594621015 | | 13 | 288.23995729805307 | 184.34140269752672 | 530.7455149871171 | 144.51170105756432 |
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Sub Motif Members
