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NonredundantMotifs:70

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known70
  • db :SWISSREGULON
  • Id :EBF1.p2
  • name :
  • score :0.893570516768295
  • External refs:
  • Internal refs:


Motif matrix
P0ACGT
135.73656443.34602631.92772621.224408
240.31953725.09735548.67618.141832
319.65344569.26304729.07980414.238428
470.0568970.93820436.67547524.564148
568.7538288.49447439.92870815.057714
61.83061765.16442435.8338929.405793
702.8853661.829134127.520224
81.886979119.2650363.6167927.465917
90130.39077501.843949
100113.360071018.874653
1129.8638170.231678032.139236
1260.78257510.50807448.74542212.198653
1330.4733410.90212999.0035231.855731
1452.429385076.907042.898299
150.9728950.908878130.3529510
1682.4136089.2679832.0239648.529172
1751.49057732.2624547.5096970.972
189.53347453.99997732.9205335.780743
1932.6852619.7363253.78469526.028449
203.6983229.71671354.1817144.637981
2128.01915710.47300491.8542991.888264
2218.86881938.88914331.99348642.483276

Sub Motif Members