Difference between revisions of "Novel motif:124"
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Revision as of 08:10, 31 May 2013
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Association to promoter expression in human samplesSummary:Significance of the correlation with CAGE expression, human
Analyst: Michiel de Hoon
link to source dataset
data
Association to promoter expression in mouse samples
Summary:Significance of the correlation with CAGE expression, mouse
Analyst: Michiel de Hoon
link to source dataset
data
GREAT analysis results for human
Summary:Genomic Enrichment of Annotations Tool (GREAT, Nat Biotechnol. 2010 May;28(5):495-501) is used to identify, both in human and in mouse, the gene ontology terms of biological processes enriched given the predicted TFBSs, and evaluated the overlap in the top-500 gene ontology terms between human and mouse. For each novel motif, the P value for the overlap was then evaluated by calculating its relative rank with respect to this background distribution.
Analyst: Michiel de Hoon
link to source dataset
data
| GO ID | GO Term | p-value |
|---|---|---|
| {{{great_results_human}}} |
GREAT analysis results for mouseGenomic Enrichment of Annotations Tool (GREAT, Nat Biotechnol. 2010 May;28(5):495-501) is used to identify, both in human and in mouse, the gene ontology terms of biological processes enriched given the predicted TFBSs, and evaluated the overlap in the top-500 gene ontology terms between human and mouse. For each novel motif, the P value for the overlap was then evaluated by calculating its relative rank with respect to this background distribution.
Analyst: Michiel de Hoon
link to source dataset
data
| GO ID | GO Term | p-value |
|---|---|---|
| {{{great_results_mouse}}} |
