Search results

|motif_cluster_2013_march_motif_members= /JASPAR:MA0164.1;Nr2e3 |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /HOCOMOCO:INSM1_f1 /JASPAR:MA0155.1;INSM1 |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /HOCOMOCO:TEAD3_si~TEAD1_f1 /JASPAR:MA0090.1;TEAD1 /SWISSREGULON:TEAD1.p2 |representative_motif_db=JASPAR

...~AP2D_f1 /HOMER:TFAP2A_Hela-AP2alpha-ChIP-Seq~TFAP2C_MCF7-TFAP2c-ChIP-Seq /JASPAR:MA0003.1;TFAP2A /SWISSREGULON:TFAP2(A,C).p2~TFAP2B.p2 /UNIPROBE:Tcfap2a_p |representative_motif_db=JASPAR

...OCOMOCO:ZFX_f1 /HOMER:ZNF711_SH-SY5Y-ZNF711-ChIP-Seq~ZFX_mES-Zfx-ChIP-Seq /JASPAR:MA0146.1;Zfx |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /HOCOMOCO:TBP_f1 /JASPAR:MA0033.1;FOXL1~MA0108.2;TBP /SWISSREGULON:FOXL1.p2~TBP.p2 /UNIPROBE:Zfp12 |representative_motif_db=JASPAR

...2-ChIP-Seq~GATA3_iTreg-Gata3-ChIP-Seq(GSE20898)~GATA1_K562-GATA1-ChIP-Seq /JASPAR:MA0037.1;GATA3~MA0140.1;Tal1::Gata1~MA0035.2;Gata1 /SWISSREGULON:GATA6.p2~ |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /HOCOMOCO:TYY1_f2 /JASPAR:MA0095.1;YY1 /SWISSREGULON:YY1.p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /JASPAR:MA0068.1;Pax4 /SWISSREGULON:PAX4.p2 |representative_motif_db=JASPAR

...OCOMOCO:PAX2_si~MAFG_si~NF2L1_f1 /HOMER:PAX5_motifB;GM12878-PAX5-ChIP-Seq /JASPAR:MA0089.1;NFE2L1::MafG~MA0067.1;Pax2 /SWISSREGULON:PAX2.p2~PAX3,7.p2~NFE2L1 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:BRCA1_f1~CXXC1_si /JASPAR:MA0133.1;BRCA1 [[Category:Motif]]

...do~ESR2_do /HOMER:NR1D1_BLRP(RAW)-Reverba-ChIP-Seq~ESR1_MCF7-ERa-ChIP-Seq /JASPAR:MA0258.1;ESR2~MA0112.2;ESR1~MA0066.1;PPARG /SWISSREGULON:PPARG.p2~ESR1.p3 |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /HOCOMOCO:NFIA+NFIB+NFIC+NFIX_si /JASPAR:MA0161.1;NFIC /UNIPROBE:Hic1_primary;SCI09 [[Category:Motif]]

...XRG_3T3L1-RXR-ChIP-Seq~PPARG_3T3L1-Pparg-ChIP-Seq~NR2C2_Hela-TR4-ChIP-Seq /JASPAR:MA0065.2;PPARG::RXRA~MA0017.1;NR2F1~MA0115.1;NR1H2::RXRA~MA0114.1;HNF4A /S |representative_motif_db=JASPAR

|motif_cluster_2013_march_motif_members= /JASPAR:MA0111.1;Spz1 /SWISSREGULON:SPZ1.p2 [[Category:Motif]]

...HOCOMOCO:MAFA_f1~MAF_f1~MAFB_f1 /HOMER:MAFA_Islet-MafA-ChIP-Seq(GSE30298) /JASPAR:MA0117.1;Mafb /SWISSREGULON:MAFB.p2 /UNIPROBE:Mafb_primary;SCI09~Mafk_pri [[Category:Motif]]

...otif_members= /HOCOMOCO:GFI1_f1~GFI1B_f1 /HOMER:GFI1B_HPC7-Gfi1b-ChIP-Seq /JASPAR:MA0038.1;Gfi /SWISSREGULON:GFI1.p2~GFI1B.p2 /UNIPROBE:Hdx_3845.3;CELL08 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /JASPAR:MA0027.1;En1 /SWISSREGULON:EN1,2.p2 [[Category:Motif]]

...1_do~TBX5_si /HOMER:TBX5_HL1-Tbx5.biotin-ChIP-Seq~EOMES_H9-Eomes-ChIP-Seq /JASPAR:MA0009.1;T~MA0103.1;ZEB1 /SWISSREGULON:TBX4,5.p2~T.p2~EOMES.p2 /UNIPROBE: [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:ARNT2_si /JASPAR:MA0130.1;ZNF354C /SWISSREGULON:KLF12.p2 [[Category:Motif]]

...25_f1~NKX21_f1~NKX32_f1~NKX28_f1 /HOMER:NKX2-5_HL1-Nkx2.5.biotin-ChIP-Seq /JASPAR:MA0122.1;Nkx3-2 /SWISSREGULON:NKX2-1,4.p2~NKX3-2.p2 /UNIPROBE:Nkx2-2_2823 [[Category:Motif]]

...r_2013_march_motif_members= /HOCOMOCO:SMAD2_si~HAND1_si~SMAD3_f1~SMAD4_si /JASPAR:MA0092.1;Hand1::Tcfe2a /SWISSREGULON:SMAD1..7,9.p2~HAND1,2.p2 /UNIPROBE:M [[Category:Motif]]

...-ChIP-Seq~TCF4_Hct116-Tcf4-ChIP-Seq~TCF7L2_K562-TCF7L2-ChIP-Seq(GSE29196) /JASPAR:MA0442.1;SOX10 /SWISSREGULON:LEF1_TCF7_TCF7L1,2.p2 /UNIPROBE:Lef1_primary [[Category:Motif]]

..._march_motif_members= /HOCOMOCO:COE1_f2 /HOMER:EBF1_proBcell-EBF-ChIP-Seq /JASPAR:MA0154.1;EBF1 /SWISSREGULON:EBF1.p2 [[Category:Motif]]

...1-ChIP-Seq~RUNX1_Jurkat-RUNX1-ChIP-Seq~RUNX2_PCa-RUNX2-ChIP-Seq(GSE33889) /JASPAR:MA0002.2;RUNX1 /SWISSREGULON:RUNX1..3.p2 [[Category:Motif]]

...COMOCO:MEF2C_f1~MEF2D_f1~MEF2A_f1 /HOMER:MEF2A_HL1-Mef2a.biotin-ChIP-Seq/ /JASPAR:MA0052.1;MEF2A /SWISSREGULON:MEF2(A,B,C,D).p2~HOX(A4,D4).p2 [[Category:Motif]]

...4_f2~KLF1_f1 /HOMER:KLF1_Erythrocyte-Klf1-ChIP-Seq~KLF4_mES-Klf4-ChIP-Seq /JASPAR:MA0039.2;Klf4 /SWISSREGULON:KLF4.p3~ZNF148.p2 /UNIPROBE:Klf7_primary;SCI0 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:EVI1_f1 /JASPAR:MA0029.1;Evi1 /SWISSREGULON:EVI1.p2 [[Category:Motif]]

...urkat-ELF1-ChIP-Seq~GABPA_Jurkat-GABPa-ChIP-Seq~ETV1_GIST48-ETV1-ChIP-Seq /JASPAR:MA0080.2;SPI1~MA0076.1;ELK4~MA0156.1;FEV~MA0062.2;GABPA~MA0136.1;ELF5~MA008 |representative_motif_db=JASPAR

...motif_members= /HOCOMOCO:ISL1_f1~NANOG_f1 /HOMER:NANOG_mES-Nanog-ChIP-Seq /JASPAR:MA0132.1;Pdx1 /SWISSREGULON:NKX6-1,2.p2~HOX(A6,A7,B6,B7).p2 /UNIPROBE:Hox [[Category:Motif]]

...3_f1~ATF1_si /HOMER:JUND_K562-JunD-ChIP-Seq~JUN_motifB;K562-cJun-ChIP-Seq /JASPAR:MA0018.2;CREB1 /SWISSREGULON:JUN.p2~ATF5_CREB3.p2~ATF4.p2~CREB1.p2 /UNIPR [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:NKX31_si /JASPAR:MA0032.1;FOXC1~MA0124.1;NKX3-1 /SWISSREGULON:FOX(C1,C2).p2~NKX3-1.p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:HINFP_f1 /JASPAR:MA0131.1;MIZF [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:HNF1A_f1~HNF1B_f1 /JASPAR:MA0046.1;HNF1A~MA0153.1;HNF1B /SWISSREGULON:HNF1A.p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:NR0B1_si~MZF1_f1 /JASPAR:MA0056.1;MZF1_1-4~MA0057.1;MZF1_5-13 /SWISSREGULON:MZF1.p2 /UNIPROBE:Egr1 [[Category:Motif]]

...NFATC1_motifB;Jurkat-NFATC1-ChIP-Seq~NFATC1_motifA;Jurkat-NFATC1-ChIP-Seq /JASPAR:MA0152.1;NFATC2 /SWISSREGULON:NFATC1..3.p2~IKZF2.p2 [[Category:Motif]]

... /HOMER:MYBL2_Hela-BMYB-ChIPSeq(GSE27030)~MYB_ERMYB-Myb-ChIPSeq(GSE22095) /JASPAR:MA0100.1;Myb /SWISSREGULON:MYB.p2~MYBL2.p2~DMAP1_NCOR(1,2)_SMARC.p2 /UNIP [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /JASPAR:MA0149.1;EWSR1-FLI1 /SWISSREGULON:EWSR1-FLI1.p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:PLAG1_f1 /JASPAR:MA0163.1;PLAG1 [[Category:Motif]]

...FIL3_si~DDIT3_f1 /HOMER:CEBPB_ThioMac-CEBPb-ChIP-Seq~CEBPB_CEBPb-ChIP-Seq /JASPAR:MA0043.1;HLF~MA0025.1;NFIL3~MA0019.1;Ddit3::Cebpa~MA0102.2;CEBPA /SWISSREG [[Category:Motif]]

...B_si~NFKB1_f1~REL_do /HOMER:NFKB1_p50-ChIP-Chip~RELA_GM12787-p65-ChIP-Seq /JASPAR:MA0101.1;REL~MA0105.1;NFKB1~MA0061.1;NF-kappaB~MA0107.1;RELA /SWISSREGULON [[Category:Motif]]

...OCOMOCO:NFYB_f1~NFYA_f1~YBOX1_f2~FOS_si~NFYC_f1~PBX3_f2~FOXI1_f1~CEBPZ_si /JASPAR:MA0060.1;NFYA /SWISSREGULON:NFY(A,B,C).p2 /UNIPROBE:Duxl_1286.2;CELL08 [[Category:Motif]]

if(motif_db =="JASPAR"){ else if(motif_db== "JASPAR"){

...rch_motif_members= /HOCOMOCO:TFCP2_f1 /HOMER:TFCP2L1_mES-Tfcp2l1-ChIP-Seq /JASPAR:MA0145.1;Tcfcp2l1 /SWISSREGULON:TFCP2.p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN423_f1 /JASPAR:MA0116.1;Zfp423 /SWISSREGULON:ZNF423.p2 /UNIPROBE:Zic3_primary;SCI09~Zic2 [[Category:Motif]]

...r_2013_march_motif_members= /HOCOMOCO:SRF_do /HOMER:SRF_PUER-Srf-ChIP-Seq /JASPAR:MA0083.1;SRF /SWISSREGULON:SRF.p3 /UNIPROBE:Srf_primary;SCI09~Tbp_seconda [[Category:Motif]]

...~E2F5_do /HOMER:E2F1_Hela-E2F1-ChIP-Seq~E2F7_Hela-E2F7-ChIP-Seq(GSE32673) /JASPAR:MA0024.1;E2F1 /SWISSREGULON:TFDP1.p2~E2F1..5.p2 /UNIPROBE:Smad3_secondary [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:RARG_do~RARA_f2 /JASPAR:MA0159.1;RXR::RAR_DR5 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:PO3F1_f1~PO5F1_do~SOX2_f1 /JASPAR:MA0143.1;Sox2~MA0142.1;Pou5f1 /SWISSREGULON:POU5F1_SOX2(dimer).p2 [[Category:Motif]]

...arch_motif_members= /HOCOMOCO:VDR_f2 /HOMER:VDR_GM10855-VDR+vitD-ChIP-Seq /JASPAR:MA0074.1;RXRA::VDR /SWISSREGULON:RXRA_VDR(dimer).p2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:HMGA1_f1 /JASPAR:MA0158.1;HOXA5 /UNIPROBE:Sox18_secondary;SCI09 [[Category:Motif]]

...K_si~FOSB_f1 /HOMER:NFE2_K562-NFE2-ChIP-Seq~JUN_motifA;K562-cJun-ChIP-Seq /JASPAR:MA0099.2;AP1~MA0150.1;NFE2L2 /SWISSREGULON:NFE2.p2~BACH2.p2~NFE2L2.p2~FOS_ [[Category:Motif]]

...9-ChIP-Seq(GSE33509)~HOXC9_Ainv15-Hoxc9-ChIP-Seq~HOXA2_mES-Hoxa2-ChIP-Seq /JASPAR:MA0070.1;PBX1 /SWISSREGULON:PBX1.p2~CUX2.p2~ONECUT1,2.p2 /UNIPROBE:Lef1_s [[Category:Motif]]

...ell-E2A-ChIP-Seq~TCF12_GM12878-Tcf12-ChIP-Seq~MYOD1_Myotube-MyoD-ChIP-Seq /JASPAR:MA0055.1;Myf~MA0048.1;NHLH1 /SWISSREGULON:TCF4_dimer.p2~NHLH1,2.p2~TFAP4.p [[Category:Motif]]

...IP-Seq(GSE31363)~NR5A2_mES-Nr5a2-ChIP-Seq~RARG_ES-RARg-ChIP-Seq(GSE30538) /JASPAR:MA0160.1;NR4A2~MA0141.1;Esrrb~MA0071.1;RORA_1 /SWISSREGULON:ESRRA.p2~NR4A2 [[Category:Motif]]

|motif_cluster_2013_march_motif_members= /HOCOMOCO:RREB1_si /JASPAR:MA0073.1;RREB1 /SWISSREGULON:RREB1.p2 [[Category:Motif]]

...eq(GSE33059)~SOX6_Myotubes-Sox6-ChIP-Seq(GSE32627)~SOX2_mES-Sox2-ChIP-Seq /JASPAR:MA0084.1;SRY~MA0078.1;Sox17~MA0077.1;SOX9~MA0087.1;Sox5 /SWISSREGULON:SOX( [[Category:Motif]]

..._members= /HOCOMOCO:NFIA+NFIB+NFIC+NFIX_f2 /HOMER:NFIC_LNCAP-NF1-ChIP-Seq /JASPAR:MA0119.1;TLX1::NFIC /SWISSREGULON:TLX1..3_NFIC(dimer).p2~NFIX.p2 [[Category:Motif]]

...HOCOMOCO:CTCF_f2 /HOMER:CTCF_CD4+-CTCF-ChIP-Seq~CTCFL_K562-CTCFL-ChIP-Seq /JASPAR:MA0139.1;CTCF /SWISSREGULON:CTCF.p2 [[Category:Motif]]

...OCOMOCO:NR1D1_f1~NR1H4_f1~RORG_f1~RORA_f1 /HOMER:NR1H4_Liver-FXR-ChIP-Seq /JASPAR:MA0072.1;RORA_2 /SWISSREGULON:NR1H4.p2~RXR(A,B,G).p2~RORA.p2 /UNIPROBE:Es [[Category:Motif]]

...CO:ZN143_si~IKZF1_f1~SUH_f1 /HOMER:ZNF143_CUTLL-ZNF143-ChIP-Seq(GSE29600) /JASPAR:MA0088.1;znf143 /SWISSREGULON:ZNF143.p2~RBPJ.p2~IKZF1.p2 [[Category:Motif]]

|?Associated motif id { data: "MotifId", title: "Associated Motif",

|?Associated motif id { data: "MotifId", title: "Associated Motif",

...D1_Islet-NeuroD1-ChIP-Seq(GSE30298)~OLIG2_Neuron-Olig2-ChIP-Seq(GSE30882) /JASPAR:MA0091.1;TAL1::TCF3 /SWISSREGULON:ZNF238.p2~SNAI1..3.p2~MYOD1.p2~ZEB1.p2~T [[Category:Motif]]

...F3_f1~PRDM1_f1 /HOMER:IRF4_GM12878-IRF4-ChIP-Seq~SPI1_Bcell-PU.1-ChIP-Seq /JASPAR:MA0050.1;IRF1~MA0051.1;IRF2 /SWISSREGULON:IRF1,2,7.p3~PRDM1.p3 /UNIPROBE: [[Category:Motif]]

...ChIP-Seq~BCL6_Liver-Bcl6-ChIP-Seq(GSE31578)~STAT5_mCD4+-Stat5a|b-ChIP-Seq /JASPAR:MA0144.1;Stat3~MA0137.2;STAT1 /SWISSREGULON:STAT2,4,6.p2~STAT1,3.p3~STAT5( [[Category:Motif]]

...:TP53_Saos-p53-ChIP-Seq~TP63_Keratinocyte-p63-ChIP-Seq~TP53_p53-ChIP-Chip /JASPAR:MA0106.1;TP53 /SWISSREGULON:TP53.p2 [[Category:Motif]]

...mbers= /HOCOMOCO:PAX6_f1~PAX5_f1 /HOMER:PAX5_motifA;GM12878-PAX5-ChIP-Seq /JASPAR:MA0014.1;Pax5~MA0069.1;Pax6 /SWISSREGULON:PAX6.p2~PAX5.p2 [[Category:Motif]]

...R:NR3C1_A549-GR-ChIP-Seq~AR_LNCAP-AR-ChIP-Seq~NR3C1_RAW264.7-GRE-ChIP-Seq /JASPAR:MA0007.1;Ar~MA0113.1;NR3C1 /SWISSREGULON:NR3C1.p2~AR.p2 [[Category:Motif]]

...3_march_motif_members= /HOCOMOCO:REST_f1 /HOMER:REST_Jurkat-NRSF-ChIP-Seq /JASPAR:MA0138.2;REST /SWISSREGULON:REST.p3 [[Category:Motif]]

...IP-Seq~MYCN_mES-nMyc-ChIP-Seq~MYC_mES-cMyc-ChIP-Seq~MAX_K562-Max-ChIP-Seq /JASPAR:MA0147.1;Myc~MA0004.1;Arnt~MA0104.2;Mycn~MA0059.1;MYC::MAX~MA0058.1;MAX~MA0 [[Category:Motif]]

...XA1-ChIP-Seq~FOXA2_Liver-Foxa2-ChIP-Seq~FOXP1_H9-FOXP1-ChIP-Seq(GSE31006) /JASPAR:MA0041.1;Foxd3~MA0031.1;FOXD1~MA0047.2;Foxa2~MA0030.1;FOXF2~MA0042.1;FOXI1~ [[Category:Motif]]

...=CELL08|score=0.1453959787096941|uniprot_entry_name=LHX8_HUMAN}}[[Category:Motif]][[Category:MotifCluster2013March]][[Category:NonRedundantMotifCluster]]