Swissregulon:NR1H4.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:9971:NR1H4:nuclear receptor subfamily 1, group H, member 4::NM_005123:FXR,RIP14,HRR1,HRR-1 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0032502!developmental process!6.05154751409557e-06!10296;8522;51196;116519;7132;5350;2081;8840;9817;1129;355;9464;3002;3306;55914;7092;8204;8775;660;166;91851;9060;353141;10509$GO:0048856!anatomical structure development!5.65671600668725e-05!10296;8522;51196;116519;5350;8840;9817;1129;9464;55914;7092;8204;8775;660;166;91851;9060;353141;10509$GO:0048731!system development!5.65671600668725e-05!10296;8522;51196;116519;5350;1129;9817;9464;8204;7092;8775;660;166;91851;9060;353141;10509$GO:0048513!organ development!0.000105275223948707!7092;8204;10296;8775;51196;660;116519;166;91851;5350;9060;9817;353141;9464$GO:0007275!multicellular organismal development!0.000186033799942865!10296;8522;51196;116519;5350;1129;9817;9464;8204;7092;8775;660;166;91851;9060;353141;10509$GO:0005515!protein binding!0.00258440392807467!8522;7132;4052;23371;5520;2081;9034;9817;6810;3002;55914;8204;660;1828;166;8450;2286;55051;131177;6737;9370;462;10296;4892;8431;51196;54815;7253;5350;3597;5502;8840;355;3306;26353;8775;7170;9060;11096$GO:0005783!endoplasmic reticulum!0.00735909773102347!8775;116519;7365;5350;2081;2286;9817;6345;9370;90411$GO:0048869!cellular developmental process!0.00868980212696533!7092;10296;8775;8522;7132;91851;2081;9817;355;353141;3002;9464;3306;10509$GO:0030154!cell differentiation!0.00868980212696533!7092;10296;8775;8522;7132;91851;2081;9817;355;353141;3002;9464;3306;10509$GO:0006937!regulation of muscle contraction!0.00982595773858886!1129;51196;7170$GO:0008105!asymmetric protein localization!0.0186412512618457!8775;55914$GO:0032501!multicellular organismal process!0.0186412512618457!462;5950;10296;8522;51196;116519;5350;1129;9817;9464;7092;8204;8775;660;166;7170;91851;9060;353141;10509$GO:0006629!lipid metabolic process!0.0283689480425522!8204;51196;8431;116519;7132;7365;51;5333;9370$GO:0048519!negative regulation of biological process!0.0311224498647825!8204;8522;8431;27244;54815;5350;2081;355;131177;9370$GO:0006950!response to stress!0.0311224498647825!462;26353;116519;27244;7132;8450;7319;55074;2081;3306$GO:0006936!muscle contraction!0.0311224498647825!1129;51196;7170;5350$GO:0003012!muscle system process!0.0311224498647825!1129;51196;7170;5350$GO:0005737!cytoplasm!0.0311224498647825!10296;8522;64343;51196;2949;116519;5350;51;2081;9817;51280;6810;6345;5333;355;79178;3002;3306;130271;55914;90411;8775;660;7170;7365;55074;2286;11227;3043;6737;9370$GO:0007242!intracellular signaling cascade!0.0311224498647825!8204;51196;660;7132;7253;23371;2081;1129;387496;5333;3002;9370;9882$GO:0006692!prostanoid metabolic process!0.0311224498647825!7132;51$GO:0006693!prostaglandin metabolic process!0.0311224498647825!7132;51$GO:0009888!tissue development!0.0329885385028205!9817;353141;660;116519;91851$GO:0006635!fatty acid beta-oxidation!0.0378687149581259!9370;51$GO:0006940!regulation of smooth muscle contraction!0.0378687149581259!1129;51196$GO:0016323!basolateral plasma membrane!0.0392568071527976!4892;6810;55914$GO:0006638!neutral lipid metabolic process!0.0418815709035355!51196;116519$GO:0006639!acylglycerol metabolic process!0.0418815709035355!51196;116519$GO:0000118!histone deacetylase complex!0.0418815709035355!8204;54815$GO:0007507!heart development!0.0418815709035355!51196;9464;5350$GO:0046486!glycerolipid metabolic process!0.0418815709035355!51196;116519$GO:0048523!negative regulation of cellular process!0.0418815709035355!8204;8522;8431;27244;54815;2081;355;131177;9370$GO:0016528!sarcoplasm!0.0418815709035355!6345;5350$GO:0016529!sarcoplasmic reticulum!0.0418815709035355!6345;5350$GO:0006662!glycerol ether metabolic process!0.0418815709035355!51196;116519$GO:0044459!plasma membrane part!0.0434611845007879!4892;10296;1828;7132;7253;23371;9034;3597;1129;51280;6810;3002;55914$GO:0007050!cell cycle arrest!0.0438262498838326!2081;8522;27244$GO:0019216!regulation of lipid metabolic process!0.0438262498838326!116519;9370$GO:0019395!fatty acid oxidation!0.0438262498838326!9370;51$GO:0032069!regulation of nuclease activity!0.0438262498838326!2081$GO:0005898!interleukin-13 receptor complex!0.0438262498838326!3597$GO:0032835!glomerulus development!0.0438262498838326!51196$GO:0004278!granzyme B activity!0.0438262498838326!3002$GO:0006987!unfolded protein response, activation of signaling protein activity!0.0438262498838326!2081$GO:0017129!triglyceride binding!0.0438262498838326!116519$GO:0050333!thiamin-triphosphatase activity!0.0438262498838326!79178$GO:0045175!basal protein localization!0.0438262498838326!55914$GO:0032075!positive regulation of nuclease activity!0.0438262498838326!2081$GO:0044255!cellular lipid metabolic process!0.0438262498838326!5333;51196;8431;116519;7132;9370;51$GO:0004857!enzyme inhibitor activity!0.0491281654801574!462;5502;11227;3699;5350$GO:0007173!epidermal growth factor receptor signaling pathway!0.0495083561859046!51196;55914 | |||
|gostat_on_mara_mm9=GO:0004293!tissue kallikrein activity!6.9044714842327e-06!16623;16622;18050;13646;16616$GO:0004252!serine-type endopeptidase activity!0.00496583421325651!16623;16622;64704;67373;18050;13646;16616;73626$GO:0017171!serine hydrolase activity!0.00496583421325651!16623;16622;64704;67373;18050;13646;16616;73626$GO:0008236!serine-type peptidase activity!0.00496583421325651!16623;16622;64704;67373;18050;13646;16616;73626$GO:0003707!steroid hormone receptor activity!0.022488741696549!13982;23957;19885;26380$GO:0005496!steroid binding!0.022488741696549!20415;13079;13982;26380$GO:0004879!ligand-dependent nuclear receptor activity!0.022488741696549!13982;23957;19885;26380$GO:0008289!lipid binding!0.027278681411039!13479;13079;16204;66113;11746;20415;67815;13982;83435 | |||
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| |||
|name=NR1H4.p1 | |name=NR1H4.p1 | ||
|weight_matrix=NA:NR1H4.p1;PO:A:C:G:T;01:10.839083:102.492542:22.936733:16.688485;02:84.357531:1.446543:43.323971:23.828798;03:64.170626:0:86.775805:2.010412;04:36.406415:2.192074:113.02516:1.333194;05:5.822018:0.822428:138.243223:8.069174;06:0:5.747984:3.536545:143.672314;07:1.592075:75.262453:23.506342:52.595973;08:145.883895:4.975304:1.493284:0.60436;09:58.351847:18.117506:46.847475:29.640015;10:34.801533:14.111334:42.752815:61.291161;11:67.264702:17.65753:66.41957:1.615041;12:96.814941:12.321709:26.497837:17.322356;13:53.763617:62.084773:16.832184:20.276269;14:14.188118:97.004777:6.143702:35.620246 | |weight_matrix=NA:NR1H4.p1;PO:A:C:G:T;01:10.839083:102.492542:22.936733:16.688485;02:84.357531:1.446543:43.323971:23.828798;03:64.170626:0:86.775805:2.010412;04:36.406415:2.192074:113.02516:1.333194;05:5.822018:0.822428:138.243223:8.069174;06:0:5.747984:3.536545:143.672314;07:1.592075:75.262453:23.506342:52.595973;08:145.883895:4.975304:1.493284:0.60436;09:58.351847:18.117506:46.847475:29.640015;10:34.801533:14.111334:42.752815:61.291161;11:67.264702:17.65753:66.41957:1.615041;12:96.814941:12.321709:26.497837:17.322356;13:53.763617:62.084773:16.832184:20.276269;14:14.188118:97.004777:6.143702:35.620246 | ||
}} | }} |
Latest revision as of 09:56, 17 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||||||||||
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