Swissregulon:PDX1.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:3651:PDX1:pancreatic and duodenal homeobox 1::NM_000209:IDX-1,STF-1,PDX-1,MODY4 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0045449!regulation of transcription!0.00460377521104804!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0044424!intracellular part!0.00460377521104804!29978;10915;51088;65251;85290;4281;3097;3084;116362;127018;4300;51274;11016;83896;1837;196528;1748;130589;4857;1045;80230;1746;55294;1879;83902$GO:0019219!regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.00460377521104804!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0005634!nucleus!0.00460377521104804!29978;10915;1748;196528;65251;4857;3097;3084;1045;1746;55294;4300;1879;51274;11016$GO:0006350!transcription!0.00460377521104804!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0010468!regulation of gene expression!0.00460377521104804!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0006355!regulation of transcription, DNA-dependent!0.00460377521104804!10915;1748;196528;65251;3097;1045;1746;4300;1879;11016;51274$GO:0031323!regulation of cellular metabolic process!0.00460377521104804!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0006351!transcription, DNA-dependent!0.00460377521104804!10915;1748;196528;65251;3097;1045;1746;4300;1879;11016;51274$GO:0032774!RNA biosynthetic process!0.00460377521104804!10915;1748;196528;65251;3097;1045;1746;4300;1879;11016;51274$GO:0019222!regulation of metabolic process!0.00547002982456391!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0016070!RNA metabolic process!0.00547002982456391!10915;1748;196528;65251;4857;3097;1045;1746;4300;1879;11016;51274$GO:0043229!intracellular organelle!0.00699293523654991!29978;10915;51088;65251;85290;4281;3097;3084;4300;51274;11016;83896;196528;1748;4857;1045;80230;1746;55294;1879;83902$GO:0043226!organelle!0.00699293523654991!29978;10915;51088;65251;85290;4281;3097;3084;4300;51274;11016;83896;196528;1748;4857;1045;80230;1746;55294;1879;83902$GO:0005622!intracellular!0.00701710712100785!29978;10915;51088;65251;85290;4281;3097;3084;116362;127018;4300;51274;11016;83896;1837;196528;1748;130589;4857;1045;91752;80230;1746;55294;1879;83902$GO:0010467!gene expression!0.00926543221351472!10915;1748;196528;65251;4857;3097;3084;1045;1746;4300;1879;11016;51274$GO:0044464!cell part!0.0192511480042388!10915;6328;85290;3097;116068;116362;2263;84658;127018;4300;51274;1837;196528;1748;91752;1746;389208;29978;51088;65251;4281;3084;11016;83896;56143;130589;4857;1045;80230;55294;83902;1879$GO:0004034!aldose 1-epimerase activity!0.0192511480042388!130589$GO:0006139!nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0216113145424654!10915;1748;196528;65251;4857;3097;3084;1045;1746;4300;1879;11016;51274$GO:0043283!biopolymer metabolic process!0.0235708651483537!29978;10915;1748;196528;65251;4857;4281;3097;1045;1746;2263;55294;4300;1879;51274;11016$GO:0005882!intermediate filament!0.0287691753415131!85290;83902;83896$GO:0045111!intermediate filament cytoskeleton!0.0287691753415131!85290;83902;83896$GO:0043170!macromolecule metabolic process!0.0287691753415131!29978;10915;65251;4281;3097;3084;2263;4300;51274;11016;196528;1748;130589;4857;1045;1746;11080;55294;1879;389208$GO:0007275!multicellular organismal development!0.0324031410913175!56143;1746;1748;4281;1879;51274;3084;1045$GO:0003677!DNA binding!0.0361077496439414!1748;196528;65251;3097;1045;1746;1879;11016;51274$GO:0008270!zinc ion binding!0.0361077496439414!196528;65251;4281;3097;91752;80230;1879;11016;51274;1837$GO:0030297!transmembrane receptor protein tyrosine kinase activator activity!0.0361077496439414!3084$GO:0004420!hydroxymethylglutaryl-CoA reductase (NADPH) activity!0.0361077496439414!119548$GO:0045941!positive regulation of transcription!0.0361077496439414!1746;1879$GO:0045935!positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0380125460166564!1746;1879$GO:0016481!negative regulation of transcription!0.0380125460166564!51274;3084$GO:0045095!keratin filament!0.0385601523659296!85290;83896$GO:0050794!regulation of cellular process!0.0394062363944098!10915;1748;196528;65251;3097;3084;1045;1746;4300;1879;11016;51274$GO:0030971!receptor tyrosine kinase binding!0.0407041759855998!3084$GO:0006366!transcription from RNA polymerase II promoter!0.0411513419357414!1746;10915;51274;1045$GO:0003700!transcription factor activity!0.0411513419357414!1746;1748;1879;51274;11016;1045$GO:0045934!negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0411513419357414!51274;3084$GO:0043169!cation binding!0.0433144613760458!56143;6328;196528;65251;4281;3097;91752;80230;84658;1879;11016;51274;1837$GO:0032501!multicellular organismal process!0.0433854866410575!56143;1748;4857;4281;3084;1045;1746;1879;51274;1837$GO:0044237!cellular metabolic process!0.0437812957087876!29978;10915;65251;4281;3097;3084;116068;2263;4300;51274;11016;196528;1748;4857;1045;119548;1746;11080;55294;1879;389208$GO:0044238!primary metabolic process!0.0478297905270286!29978;10915;65251;4281;3097;3084;2263;4300;51274;11016;196528;1748;130589;4857;1045;119548;1746;11080;55294;1879;389208$GO:0005007!fibroblast growth factor receptor activity!0.0478297905270286!2263$GO:0030296!protein tyrosine kinase activator activity!0.0478297905270286!3084$GO:0043231!intracellular membrane-bound organelle!0.0478297905270286!29978;10915;1748;196528;65251;4857;3097;3084;1045;80230;1746;55294;4300;1879;51274;11016$GO:0043227!membrane-bound organelle!0.0478297905270286!29978;10915;1748;196528;65251;4857;3097;3084;1045;80230;1746;55294;4300;1879;51274;11016$GO:0031325!positive regulation of cellular metabolic process!0.0480202922258786!1746;1879$GO:0032502!developmental process!0.0482889775799215!56143;1748;4281;3084;1045;1746;2263;1879;51274 | |||
|gostat_on_mara_mm9=GO:0010382!cell wall metabolic process!0.0494304244376417!80289;170719$GO:0007047!cell wall organization and biogenesis!0.0494304244376417!80289;170719$GO:0016998!cell wall catabolic process!0.0494304244376417!80289;170719$GO:0045229!external encapsulating structure organization and biogenesis!0.0494304244376417!80289;170719 | |||
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|motif_activities_mm9=2.30523891917,1.42113788069,1.78523667006,2.24264068382,1.99052891189,1.52373841418,1.18688588358,2.83764895623,1.75345876976,1.66723444196,1.17374287389,1.45180337608,1.92103557532,2.10228884299,0.344570853974,0.366936616301,0.596469172685,1.33709708993,1.92133333133,1.58283489725,-0.615112770108,0.151156315591,-0.252233138588,0.57281488816,0.770778007897,1.46328262062,1.19811696828,0.809579504571,1.52597305036,1.78535762669,1.07930078136,-0.711960903338,-0.216003334055,0.474141879269,0.648850420975,1.20957002439,1.26480898187,-2.5130953062,-2.0025912523,-2.37290891434,-3.00615818055,-2.72814916469,-2.00132594219,1.44030413115,1.51525858329,0.819920541913,0.233141196924,-0.787270570639,-0.089409369042,-0.275754685157,-0.314937327025,-0.250567788759,2.60687219067,2.0376733325,1.86557064124,0.196377823262,0.451835024207,0.576022376657,-1.30153290701,-1.50891698486,-1.07734522883,0.0727728750036,0.733138783183,-0.855276972113,-0.914890385754,-0.685890247963,-1.10556524827,-1.81906902842,-0.80920762877,-0.825173074427,-0.721690642635,-2.18474739718,-1.99105393345,-0.226343466745,-0.320188987279,-1.1581648507,-0.648106518637,-0.260304547859,-0.211600598785,-1.7141462184,-1.65436891945,-1.54148164806,-0.507916890939,-0.0514843760364,-0.642459227457,-1.77926013774,-1.47097311478,-1.42896622818,-0.103053046018,-0.224183602623,-0.0225589398803,-0.0185372270314,0.283771026582,0.0542927938665,0.3197906619,1.08310862499,0.00799187014254,1.14677114029,0.793682550379,0.816462685073,1.52394683451,2.39159999074,3.66799164922,3.27559609126,-0.720493581015,-0.384031145971,-0.282443437251,0.372884397085,0.591581233644,0.635053917994,0.197210018529,0.293774354375,-0.161265998121,0.122174820048,0.201992152065,0.167056297345,0.727822471236,0.660552156967,-1.01269750226,-0.303251669045,0.37173434013,0.0665026558345,0.804123252372,1.60177509748,1.5503165063,1.76306687793,-0.8837596094,-0.967686064499,-0.704353972901,-0.0887806290727,0.909932300487,-0.18018516011,-0.944175170238,-0.765638693583,0.22573373438,0.0344796719753,-0.117117429603,-0.702372453298,-0.708910904504,-0.848071423571,0.363339582772,0.018984715377,-0.199277343822,-0.490695423232,-0.607367386011,-0.718913890011,-0.890408765552,-1.23931454598,1.42428358263,1.3963389508,0.761029948986,0.68659525197,0.2357528924,-0.116802014476,0.0677221016592,-0.171512590699,-1.0989238083,-1.29302977143,-1.54673730066,0.220363940795,0.160326595447,-0.0531994631681,-0.353444323509,0.0156717726775,-0.220244455517,0.334350525318,-0.652762909004,-0.144263574205,-0.163515102083,-0.900956603753,-0.269519704742,-0.421614232539,-0.927169402392,-0.577792216497,-0.511434328201,-1.64743853965,1.91305586371,1.74189213485,0.806211833415,0.966737140807,0.988689018662,1.44661625918,1.34846376521,1.23690850305,1.16017929658,0.756520600609,1.08448831481,0.989221382725,1.04170439877,1.69750201453,0.75939287125,0.783170420017,0.369189011753,0.215899644659,0.183360120722,-0.266699667992,-0.180480684957,0.0698806168847,-0.504333214227,-0.145868829944,-0.382929650215,-0.608587115801,-0.0745948732041,-0.144534898927,-0.211687864603,-0.0905438057797,0.256848825714,0.53266782733,0.272566234381,0.26325690341,0.711798690925,-0.534611950142,0.529222036189,-0.785312496321,-0.673800011101,-0.512227519003,-0.423401066173,-0.260397925703,-0.820425086861,-0.0702694970384,-0.548463067504,-0.848167791632,-0.593705262367,-0.302377168313,-0.305670396002,0.25205945552,-0.687805611248,-0.278977679519,-0.497423199769,-0.822239251259,-1.25332255364,-1.28505637097,-0.958070282918,-1.61432529695,-0.588205694979,-0.0140005031745,0.0767202608519,0.0596045119048,0.46062047969,0.584889377888,0.908385437969,0.763439524332,1.04160214701,0.544116244564,0.544928788839,1.3193724843,1.38421611318,0.860909853776,1.038642765,0.0336415859968,-0.320421108248,-1.00190566688,-0.243037972845,-0.309571892848,2.32512006577,0.184630144044,0.0828495731409,0.681096642403,0.621813895593,1.19415729857,0.845405072729,0.982765737278,1.43252277064,1.49863469637,1.32634502726,1.49134199993,-0.6110946283,-0.132449937222,-0.784742178368,-0.595369101786,-0.758505555553,-1.20434398111,-0.706336296035,-1.15659905179,-0.911211202744,-0.565597553928,-0.615676667047,1.93867274214,0.879316361608,1.52745828502,2.1066960869,2.5553367789,0.783581481064,-0.185149466787,-0.413554474374,-0.27711147795,0.148466440766,-0.0011277786831,0.938605108464,-0.00494627944436,-0.171842653325,-0.459205736395,-0.0357439615669,-1.35838394473,-0.0870716258536,0.054653368704,0.393454229363,-0.643795069689,-0.0946720530802,-0.836197252057,-0.756356297807,-1.62494856946,0.172146523532,-0.81032000792,-0.175002888989,-0.0743586310306,-0.534539804127,-0.750011725066,-0.878198619622,-0.824976377751,-1.11521605634,-1.03083477668,-0.520918082179,-0.996723830994,-0.124049429251,0.218505334053,-0.555204411808,-1.06324185239,-0.478260744421,0.0686472999395,-0.158223194563,0.0907064091872,0.510830014082,-0.13440155168,0.113805523736,0.230365705326,0.218784179578,0.3663779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| |||
|name=PDX1.p1 | |name=PDX1.p1 | ||
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}} | }} |
Latest revision as of 09:57, 17 April 2012
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||
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