Template:FFCP: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
| Line 241: | Line 241: | ||
<html></thead><tbody></html><tr><td> | <html></thead><tbody></html><tr><td> | ||
{{#arraymap:{{{ontology_enrichment_disease}}}|;|$ | {{#arraymap:{{{ontology_enrichment_disease}}}|;|$ | ||
|[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}} | |{{#set:ffcp_ontology_enrichment_disease={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}} | ||
|</td></tr><tr><td>}} | |||
</td></tr> | |||
<html></tbody></html></table> | |||
</div> | |||
}} | |||
<div style="clear:both;"></div> | |||
== Ontology-based sample term enrichment analysis v019 ver. == | |||
{{#if:{{{ontology_enrichment_celltype}}}| | |||
<div style="float:left;width:33%;"> | |||
<table class="enrichment_list"><caption class="table_title">Cell Type</caption><html><thead></html> | |||
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr> | |||
<html></thead><tbody></html><tr><td> | |||
{{#arraymap:{{{ontology_enrichment_celltype}}}|;|$ | |||
|{{#set:ffcp_ontology_enrichment_celltype={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}} | |||
|</td></tr><tr><td>}} | |||
</td></tr> | |||
<html></tbody></html></table> | |||
</div> | |||
}}{{#if:{{{ontology_enrichment_uberon}}}| | |||
<div style="float:left;width:33%;"> | |||
<table class="enrichment_list"><caption class="table_title">Uber Anatomy</caption><html><thead></html> | |||
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr> | |||
<html></thead><tbody></html><tr><td> | |||
{{#arraymap:{{{ontology_enrichment_uberon}}}|;|$ | |||
|{{#set:ffcp_ontology_enrichment_uberon={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}} | |||
|</td></tr><tr><td>}} | |||
</td></tr> | |||
<html></tbody></html></table> | |||
</div> | |||
}}{{#if:{{{ontology_enrichment_disease}}}| | |||
<div style="float:left;width:33%;"> | |||
<table class="enrichment_list"><caption class="table_title">Disease</caption><html><thead></html> | |||
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr> | |||
<html></thead><tbody></html><tr><td> | |||
{{#arraymap:{{{ontology_enrichment_disease}}}|;|$ | |||
|{{#set:ffcp_ontology_enrichment_disease={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}} | |||
|</td></tr><tr><td>}} | |</td></tr><tr><td>}} | ||
</td></tr> | </td></tr> | ||
| Line 279: | Line 316: | ||
</div></td></tr></table> | </div></td></tr></table> | ||
}} | }} | ||
--> | --> | ||
Revision as of 09:39, 17 August 2012
| short description: | |
|---|---|
| EntrezGene: | [[EntrezGene%3A{{{EntrezGene}}}|{{{EntrezGene}}}]] |
| description: | |
| Species: | |
| association with transcript: | |
| HGNC: | |
| UniProt: |
View on UCSC genome browser OSC local mirror
Mouse over to see Genome browser image, Click image to go to Genome browser
{{#ucsc_link:Template:FFCP|https://fantom5-collaboration.gsc.riken.jp/ucsc/}}
CAGE Expression
| sample | TPM value |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_celltype}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_uberon}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_disease}}}|]] |
Ontology-based sample term enrichment analysis v019 ver.
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_celltype}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_uberon}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_disease}}}|]] |
"FFCP" is not a number.
