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== Ontology-based sample term enrichment analysis v019 ver. ==
== Ontology-based sample term enrichment analysis v019 ver. ==
{{#if:{{{ontology_enrichment_celltype}}}|
{{#if:{{{ontology_enrichment_celltype_v019}}}|
<div style="float:left;width:33%;">
<div style="float:left;width:33%;">
<table class="enrichment_list"><caption class="table_title">Cell Type</caption><html><thead></html>
<table class="enrichment_list"><caption class="table_title">Cell Type</caption><html><thead></html>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<html></thead><tbody></html><tr><td>
<html></thead><tbody></html><tr><td>
{{#arraymap:{{{ontology_enrichment_celltype}}}|;|$
{{#arraymap:{{{ontology_enrichment_celltype_v019}}}|;|$
|{{#set:ffcp_ontology_enrichment_celltype={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|{{#set:ffcp_ontology_enrichment_celltype_v019={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|</td></tr><tr><td>}}
|</td></tr><tr><td>}}
</td></tr>
</td></tr>
<html></tbody></html></table>
<html></tbody></html></table>
</div>
</div>
}}{{#if:{{{ontology_enrichment_uberon}}}|
}}{{#if:{{{ontology_enrichment_uberon_v019}}}|
<div style="float:left;width:33%;">
<div style="float:left;width:33%;">
<table class="enrichment_list"><caption class="table_title">Uber Anatomy</caption><html><thead></html>
<table class="enrichment_list"><caption class="table_title">Uber Anatomy</caption><html><thead></html>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<html></thead><tbody></html><tr><td>
<html></thead><tbody></html><tr><td>
{{#arraymap:{{{ontology_enrichment_uberon}}}|;|$
{{#arraymap:{{{ontology_enrichment_uberon_v019}}}|;|$
|{{#set:ffcp_ontology_enrichment_uberon={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|{{#set:ffcp_ontology_enrichment_uberon_v019={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|</td></tr><tr><td>}}
|</td></tr><tr><td>}}
</td></tr>
</td></tr>
<html></tbody></html></table>
<html></tbody></html></table>
</div>
</div>
}}{{#if:{{{ontology_enrichment_disease}}}|
}}{{#if:{{{ontology_enrichment_disease_v019}}}|
<div style="float:left;width:33%;">
<div style="float:left;width:33%;">
<table class="enrichment_list"><caption class="table_title">Disease</caption><html><thead></html>
<table class="enrichment_list"><caption class="table_title">Disease</caption><html><thead></html>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<tr><th>Ontology term</th><th>p-value</th><th>n</th></tr>
<html></thead><tbody></html><tr><td>
<html></thead><tbody></html><tr><td>
{{#arraymap:{{{ontology_enrichment_disease}}}|;|$
{{#arraymap:{{{ontology_enrichment_disease_v019}}}|;|$
|{{#set:ffcp_ontology_enrichment_disease={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|{{#set:ffcp_ontology_enrichment_disease_v019={{#replace:$|!|;}}}}[[{{#explode:$|!|0}}|{{#show:{{#explode:$|!|0}}|?name}}]]</td><td>{{#explode:$|!|1}}</td><td>{{#explode:$|!|2}}
|</td></tr><tr><td>}}
|</td></tr><tr><td>}}
</td></tr>
</td></tr>

Revision as of 09:41, 17 August 2012


short description:
EntrezGene: [[EntrezGene%3A{{{EntrezGene}}}|{{{EntrezGene}}}]]
description:
Species:
association
with transcript:
HGNC:
UniProt:

View on UCSC genome browser OSC local mirror

Mouse over to see Genome browser image, Click image to go to Genome browser

{{#ucsc_link:Template:FFCP|https://fantom5-collaboration.gsc.riken.jp/ucsc/}}

CAGE Expression

sample TPM value



  • Click each plot point to find sample in table

Ontology-based sample term enrichment analysis

Cell Type
Ontology termp-valuen
[[{{{ontology_enrichment_celltype}}}|]]
Uber Anatomy
Ontology termp-valuen
[[{{{ontology_enrichment_uberon}}}|]]
Disease
Ontology termp-valuen
[[{{{ontology_enrichment_disease}}}|]]

Ontology-based sample term enrichment analysis v019 ver.

Cell Type
Ontology termp-valuen
[[{{{ontology_enrichment_celltype_v019}}}|]]
Uber Anatomy
Ontology termp-valuen
[[{{{ontology_enrichment_uberon_v019}}}|]]
Disease
Ontology termp-valuen
[[{{{ontology_enrichment_disease_v019}}}|]]







"FFCP" is not a number.

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