Template:FFCP others: Difference between revisions
From FANTOM5_SSTAR
mNo edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{Loading|loadingimage=sprites.gif}}<table> | {{Loading|loadingimage=sprites.gif}}<table> | ||
<tr>< | <tr><thscope="row"align="right">CAGE_peaks_ID:</th><td>{{{cage_peaks_id}}}</td></tr> | ||
<tr>< | <tr><thscope="row"align="right">Chr:</th><td>{{{chromosome}}}</td></tr> | ||
< | <tr><thscope="row"align="right">Start:</th><td>{{{start}}}</td></tr> | ||
<tr><thscope="row"align="right">End:</th><td>{{{end}}}</td></tr> | |||
<tr>< | <tr><thscope="row"align="right">Score:</th><td>{{{score}}}</td></tr> | ||
<tr>< | <tr><thscope="row"align="right">Strand:</th><td>{{{strand}}}</td></tr> | ||
<tr><thscope="row"align="right">Ensembl_transcript_id:</th><td>{{{ensembl_transcript_id}}}</td></tr> | |||
<tr><thscope="row"align="right">Ensembl_gene_id:</th><td>{{{ensembl_gene_id}}}</td></tr> | |||
<tr><thscope="row"align="right">Ensembl_gene_name:</th><td>{{{ensembl_gene_name}}}</td></tr> | |||
}}</td></tr><tr>< | <tr><thscope="row"align="right">Augustus_gene_name:</th><td>{{{augustus_gene_name}}}</td></tr> | ||
<tr>< | <tr><thscope="row"align="right">RefSeq_transcript_id:</th><td>{{{refseq_transcript_id}}} | ||
<tr><thscope="row"align="right">Genscan_gene_name:</th><td>{{{genscan_gene_name}}}</td></tr> | |||
<tr><thscope="row"align="right">EST_gene_name:</th><td>{{{est_gene_name}}}</td></tr> | |||
<tr><thscope="row"align="right">ALDB_lincRNA:</th><td>{{{aldb_lincRNA}}}</td></tr> | |||
<tr><thscope="row"align="right">NONCODE:</th><td>{{{noncode}}}</td></tr> | |||
</table> | </table> | ||
Revision as of 14:24, 13 September 2018
| {{{cage_peaks_id}}} |
| {{{chromosome}}} |
| {{{start}}} |
| {{{end}}} |
| {{{score}}} |
| {{{strand}}} |
| {{{ensembl_transcript_id}}} |
| {{{ensembl_gene_id}}} |
| {{{ensembl_gene_name}}} |
| {{{augustus_gene_name}}} |
| {{{refseq_transcript_id}}} |
| {{{genscan_gene_name}}} |
| {{{est_gene_name}}} |
| {{{aldb_lincRNA}}} |
| {{{noncode}}} |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
"FFCP others" is not a number.
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Cage peaks id" (as page type) with input value "{{{cage_peaks_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Start" (as page type) with input value "{{{start}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "End" (as page type) with input value "{{{end}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Score" (as page type) with input value "{{{score}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Ensembl transcript id" (as page type) with input value "{{{ensembl_transcript_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Ensembl gene id" (as page type) with input value "{{{ensembl_gene_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Ensembl gene name" (as page type) with input value "{{{ensembl_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Augustus gene name" (as page type) with input value "{{{augustus_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Refseq transcript id" (as page type) with input value "{{{refseq_transcript_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Genscan gene name" (as page type) with input value "{{{genscan_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Est gene name" (as page type) with input value "{{{est_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Aldb lincRNA" (as page type) with input value "{{{aldb_lincRNA}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Noncode" (as page type) with input value "{{{noncode}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
