Template:MCL coexpression mm9: Difference between revisions
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=== Novel motifs === | |||
<table id="tfbs_overexpression_table"></table> | |||
=== JASPAR motifs === | |||
<table id="tfbs_overexpression_jaspar"><html><thead></html> | |||
<tr><th>Motifs</th><th>-log10(p-value)</th></tr><html></thead><tbody></html> | |||
<tr><td> | |||
{{#replace:{{#replace:{{{tfbs_overrepresentation_jaspar}}}|,|</td></tr><tr><td>}}|;|</td><td>}} | |||
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{{#set:cp_member_count={{#ask:[[Category:FFCP]][[Species::Mouse (Mus musculus)]][[MCL_coexpression_id::{{PAGENAME}}]]|format=count}}}} | {{#set:cp_member_count={{#ask:[[Category:FFCP]][[Species::Mouse (Mus musculus)]][[MCL_coexpression_id::{{PAGENAME}}]]|format=count}}}} | ||
[[Category:MCL_coexpression_mm9]] | [[Category:MCL_coexpression_mm9]] | ||
Revision as of 10:20, 23 January 2013
Phase1 CAGE Peaks
GOStat results on Coexpression cluster
The results for GOStat analysis on co-expressed clusters("All" category). <br>Analyst: Erik Arner
| GO ID | GO name | FDR corrected p-value |
|---|---|---|
| {{{gostat_on_MCL_coexpression}}} |
Relative expression of the co-expression cluster -Median-
<br>Analyst:
"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.
Ontology enrichment
<br>Analyst:
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_celltype}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_uberon}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_disease}}}|]] |
TFBS overrepresentation
The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <br>Analyst: Michiel de Hoon
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
|
{{{tfbs_overrepresentation_jaspar}}} |
