Template:MCL coexpression mm9: Difference between revisions
From FANTOM5_SSTAR
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var elems = id.split('.'); | var elems = id.split('.'); | ||
return sReturn = "<a href=\"/resource_browser/FF:"+elems[2]+"\">"+decodeURIComponent(elems[0])+" "+elems[1]+"</a>"; | return sReturn = "<a href=\"/resource_browser/FF:"+elems[2]+"\">"+decodeURIComponent(elems[0])+" "+elems[1]+"</a>"; | ||
} },{ "sTitle": "Score", "sType": "numeric" }], | } },{ "sTitle": "Score", "sType": "numeric" ,"fnRender": function (obj) { | ||
var num =obj.aData[obj.iDataColumn]; | |||
return num.toFixed(2) ; | |||
}}], | |||
"aaSorting": [[ 1, "desc" ]] | "aaSorting": [[ 1, "desc" ]] | ||
}); | }); | ||
Revision as of 14:53, 2 April 2014
Phase1 CAGE Peaks
GOStat results on Coexpression cluster
The results for GOStat analysis on co-expressed clusters("All" category). <br>Analyst: Erik Arner
| GO ID | GO name | FDR corrected p-value |
|---|---|---|
| {{{gostat_on_MCL_coexpression}}} |
Relative expression of the co-expression cluster -Median-
<br>Analyst:
"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.
Ontology enrichment
<br>Analyst:
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_celltype}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_uberon}}}|]] |
| Ontology term | p-value | n |
|---|---|---|
| [[{{{ontology_enrichment_disease}}}|]] |
TFBS overrepresentation
The values shown are the p-values for over-representation of the motif in this co-expression cluster. So a small p-value means a strong over-representation. <br>Analyst: Michiel de Hoon
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
|
{{{tfbs_overrepresentation_jaspar}}} |
