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UBERON:0000467

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Name:anatomical system
Namespace:FANTOM
Definition:"Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity[CARO]. A group of organs that work together to perform a certain task [Wikipedia]." [CARO:0000011, CARO:MAH, Wikipedia:Organ_system]
Xrefs:
links:

AAO:0000007
AEO:0000011
BILA:0000011
CARO:0000011
EHDAA2:0001330
EHDAA2:0003011
EHDAA:392
EMAPA:16103
EV:0100000
FBbt:00004856
FMA:7149
galen:AnatomicalSystem
HAO:0000011
MA:0000003
ncithesaurus:Organ_System
NIF_GrossAnatomy:birnlex_14
OpenCyc:Mx4rCWM0QCtDEdyAAADggVbxzQ
SCTID:278195005
TAO:0001439
TGMA:0001831
WBbt:0005746
XAO:0003002

ZFA:0001439
Synonyms: "body system" EXACT [NIF_GrossAnatomy:birnlex_14]
"organ system" EXACT []
"system" BROAD [GO:0048731]
Alt_id: UBERON:CARO_0000011-XAO_0003002-ZFA_0001439
UBERON:FBbt_00004856-FBbt_00004969-FMA_7149-FMA_72979-MA_0000003-MA_0000014-MIAA_0000033-WBbt_0005730-XAO_0000176
Subset: uberon_slim
upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000480(anatomical group)
part_of:UBERON:0000468(multi-cellular organism)



Children

is a:UBERON:0000383 (musculature of body),UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001032 (sensory system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002193 (hemolymphoid system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system),UBERON:0003956 (aqueous drainage system),UBERON:0004122 (genitourinary system),UBERON:0004456 (entire sense organ system),UBERON:0004535 (cardiovascular system),UBERON:0004770 (articular system),UBERON:0005281 (ventricular system of central nervous system),UBERON:0005282 (ventricular system of brain),UBERON:0005409 (gastrointestinal system),UBERON:0006524 (alveolar system),UBERON:0007798 (vascular system)
part of:UBERON:0000062 (organ),UBERON:0011216 (organ system subdivision)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000467 (anatomical system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.