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<img width=320 height=320 src="http://lifesciencedb.jp/bp3d/icon.cgi?i=FMA9576&p=front&v=3%2e0&t=conventional&c=1&m=bp3d&s=L">
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{{UBERON
{{UBERON
|id=UBERON:0000915
|<html><div style="width:320px;height:320px;float:right;"><img width
|name=thoracic segment of trunk
|alt_id=UBERON:FBbt_00000015-FMA_9576-MA_0000022-MIAA_0000295
|namespace=
|anatomical_img_id=FMA:9576
|def="Organismal subdivision of body that lies between the head and the abdomen [Wikipedia]." [Wikipedia:Thorax]
|xref=FMA:259209;;MA:0000022;;SCTID:302551006
|is_a=UBERON:0009569
|synonym="thorax" RELATED [MA:0000022];;"upper body" RELATED []
|comment=Usage notes: note that we use the slightly verbose term 'thoracic segment of trunk' to avoid confusuon with insect thorax. todo - taxonomic constraints. Also, in FMA 'thorax' is a synonym for chest
|comment=Usage notes: note that we use the slightly verbose term 'thoracic segment of trunk' to avoid confusuon with insect thorax. todo - taxonomic constraints. Also, in FMA 'thorax' is a synonym for chest
|alt_id=UBERON:FBbt_00000015-FMA_9576-MA_0000022-MIAA_0000295
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Organismal subdivision of body that lies between the head and the abdomen [Wikipedia]." [Wikipedia:Thorax]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|is_a=UBERON:0009569
|is_obsolete=
|located_in=
|located_in=
|name=thoracic segment of trunk
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;"spatially_disjoint_from" UBERON:0000026;;"spatially_disjoint_from" UBERON:0000033;;"spatially_disjoint_from" UBERON:0002417
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;"spatially_disjoint_from" UBERON:0000026;;"spatially_disjoint_from" UBERON:0000033;;"spatially_disjoint_from" UBERON:0002417
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="thorax" RELATED [MA:0000022];;"upper body" RELATED []
|union_of=
|xref=FMA:259209;;MA:0000022;;SCTID:302551006
}}
}}

Revision as of 18:36, 29 November 2012

Name:thoracic segment of trunk
Definition:"Organismal subdivision of body that lies between the head and the abdomen [Wikipedia]." [Wikipedia:Thorax]
Xrefs:
links:

FMA:259209
MA:0000022

SCTID:302551006
Synonyms: "thorax" RELATED [MA:0000022]
"upper body" RELATED []
Comments:Usage notes: note that we use the slightly verbose term 'thoracic segment of trunk' to avoid confusuon with insect thorax. todo - taxonomic constraints. Also, in FMA 'thorax' is a synonym for chest
Alt_id: UBERON:FBbt_00000015-FMA_9576-MA_0000022-MIAA_0000295
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0009569(subdivision of trunk)



Children

part of:UBERON:0001103 (diaphragm),UBERON:0001443 (chest),UBERON:0001515 (thoracic aorta),UBERON:0001533 (subclavian artery),UBERON:0002224 (thoracic cavity),UBERON:0003830 (thoracic segment muscle),UBERON:0003834 (thoracic segment blood vessel),UBERON:0005178 (thoracic cavity element),UBERON:0005181 (thoracic segment organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} (thoracic segment of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results