UBERON:0001896
From FANTOM5_SSTAR
Name: | medulla oblongata | ||
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Definition: | "Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO]." [FMA:62004, GO:0021550, Wikipedia:Medulla_oblongata] | ||
Xrefs: |
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Synonyms: |
"bulb" BROAD [] "bulbus" EXACT [FMA:62004, FMA:TA] "medulla" BROAD [ABA:MY] "metepencephalon" RELATED [FMA:62004] | ||
Alt_id: | UBERON:FMA_62004-MA_0000206-MIAA_0000111-XAO_0003100-ZFA_0000545 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure) |
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part_of: | UBERON:0002028(hindbrain),UBERON:0002298(brainstem),UBERON:0005290(myelencephalon) |
Children
is a: | FF:10361-105F1 (medulla oblongata, newborn, donor10223) |
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derives from: | FF:0010038 (human medulla oblongata - adult sample),FF:0011284 (mouse medulla oblongata- adult sample),FF:0011465 (mouse medulla oblongata- neonate N30 sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10155-103A2 (medulla oblongata, adult, donor10252)
- 10174-103C3 (medulla oblongata - adult, donor10196)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
- 1396-42A3 (medulla oblongata, neonate N30)
- 17-12C2 (medulla oblongata, adult)
Mouse (Mus musculus)
- 10038-101F2 (medulla oblongata, adult, pool1)
- 10155-103A2 (medulla oblongata, adult, donor10252)
- 10174-103C3 (medulla oblongata - adult, donor10196)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
- 1396-42A3 (medulla oblongata, neonate N30)
- 17-12C2 (medulla oblongata, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001896 (medulla oblongata), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
8.98e-131 | FFCP PHASE1:Hg19::chr12:44467410..44467418,+#_68c3e983765014266873215ef9f2974a | p13@TMEM117 |
8.98e-131 | FFCP PHASE2:Hg19::chr2:8851401..8851408,+#_68c3e983765014266873215ef9f2974a | p@chr2:8851401..8851408, + |
8.98e-131 | FFCP PHASE1:Hg19::chr6:132580699..132580702,+#_68c3e983765014266873215ef9f2974a | p@chr6:132580699..132580702, + |
8.98e-131 | FFCP PHASE1:Hg19::chr5:35090057..35090065,-#_68c3e983765014266873215ef9f2974a | p27@PRLR |
8.98e-131 | FFCP PHASE1:Hg19::chr2:8851401..8851408,+#_68c3e983765014266873215ef9f2974a | p@chr2:8851401..8851408, + |
8.98e-131 | FFCP PHASE2:Hg19::chr5:35090318..35090324,-#_68c3e983765014266873215ef9f2974a | p@chr5:35090318..35090324, - |
8.98e-131 | FFCP PHASE2:Hg19::chr12:44467410..44467418,+#_68c3e983765014266873215ef9f2974a | p13@TMEM117 |
8.98e-131 | FFCP PHASE2:Hg19::chr6:132580699..132580702,+#_68c3e983765014266873215ef9f2974a | p@chr6:132580699..132580702, + |
8.98e-131 | FFCP PHASE1:Hg19::chr5:35090318..35090324,-#_68c3e983765014266873215ef9f2974a | p@chr5:35090318..35090324, - |
8.98e-131 | FFCP PHASE2:Hg19::chr5:35090057..35090065,-#_68c3e983765014266873215ef9f2974a | p27@PRLR |
5.2e-118 | FFCP PHASE1:Hg19::chr8:12803146..12803155,+#_186f65f65aa00cbd80c7e67372831ac6 | p17@KIAA1456 |
5.2e-118 | FFCP PHASE1:Hg19::chr11:114146042..114146050,-#_186f65f65aa00cbd80c7e67372831ac6 | p@chr11:114146042..114146050, - |
5.2e-118 | FFCP PHASE2:Hg19::chr8:12803146..12803155,+#_186f65f65aa00cbd80c7e67372831ac6 | p17@KIAA1456 |
5.2e-118 | FFCP PHASE2:Hg19::chr11:114146042..114146050,-#_186f65f65aa00cbd80c7e67372831ac6 | p@chr11:114146042..114146050, - |
5.69e-99 | FFCP PHASE2:Hg19::chr7:129015906..129015915,+#_a7ed9df5bdde6b712291defad845530d | p@chr7:129015906..129015915, + |
5.69e-99 | FFCP PHASE1:Hg19::chr5:35090259..35090267,-#_a7ed9df5bdde6b712291defad845530d | p12@PRLR |
5.69e-99 | FFCP PHASE1:Hg19::chr7:129015906..129015915,+#_a7ed9df5bdde6b712291defad845530d | p@chr7:129015906..129015915, + |
5.69e-99 | FFCP PHASE2:Hg19::chr5:35090259..35090267,-#_a7ed9df5bdde6b712291defad845530d | p12@PRLR |
7.95e-99 | FFCP PHASE2:Hg19::chr7:129027894..129027906,+#_c9053c77dbf3bb4c2497ee775605383a | p16@AHCYL2 |
7.95e-99 | FFCP PHASE1:Hg19::chr7:129027894..129027906,+#_c9053c77dbf3bb4c2497ee775605383a | p16@AHCYL2 |
1.55e-98 | FFCP PHASE1:Hg19::chr8:37561236..37561245,+#_c4bfa268b9ff0ac0b1618f9f176c0316 | p@chr8:37561236..37561245, + |
1.55e-98 | FFCP PHASE2:Hg19::chr8:37561236..37561245,+#_c4bfa268b9ff0ac0b1618f9f176c0316 | p@chr8:37561236..37561245, + |
6.24e-88 | FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_5a5321b3923df58e622e2ffe862f37a8 | p@chr7:129015806..129015815, + |
6.24e-88 | FFCP PHASE1:Hg19::chr12:129304411..129304414,-#_5a5321b3923df58e622e2ffe862f37a8 | p11@SLC15A4 |
6.24e-88 | FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_5a5321b3923df58e622e2ffe862f37a8 | p@chr7:129012882..129012891, - |
6.24e-88 | FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_5a5321b3923df58e622e2ffe862f37a8 | p20@PRLR |
6.24e-88 | FFCP PHASE2:Hg19::chr11:119216846..119216857,-#_5a5321b3923df58e622e2ffe862f37a8 | p@chr11:119216846..119216857, - |
6.24e-88 | FFCP PHASE2:Hg19::chr12:44467399..44467407,+#_5a5321b3923df58e622e2ffe862f37a8 | p12@TMEM117 |
6.24e-88 | FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_5a5321b3923df58e622e2ffe862f37a8 | p20@PRLR |
6.24e-88 | FFCP PHASE2:Hg19::chr12:20951599..20951604,+#_5a5321b3923df58e622e2ffe862f37a8 | p@chr12:20951599..20951604, + |
6.24e-88 | FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_5a5321b3923df58e622e2ffe862f37a8 | p@chr7:129015806..129015815, + |
6.24e-88 | FFCP PHASE1:Hg19::chr11:119216846..119216857,-#_5a5321b3923df58e622e2ffe862f37a8 | p@chr11:119216846..119216857, - |
6.24e-88 | FFCP PHASE2:Hg19::chr15:40492238..40492270,+#_5a5321b3923df58e622e2ffe862f37a8 | p8@BUB1B |
6.24e-88 | FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_5a5321b3923df58e622e2ffe862f37a8 | p26@PRLR |
6.24e-88 | FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_5a5321b3923df58e622e2ffe862f37a8 | p26@PRLR |
6.24e-88 | FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_5a5321b3923df58e622e2ffe862f37a8 | p@chr7:129012882..129012891, - |
6.24e-88 | FFCP PHASE1:Hg19::chr12:20951599..20951604,+#_5a5321b3923df58e622e2ffe862f37a8 | p@chr12:20951599..20951604, + |
6.24e-88 | FFCP PHASE1:Hg19::chr15:40492238..40492270,+#_5a5321b3923df58e622e2ffe862f37a8 | p8@BUB1B |
6.24e-88 | FFCP PHASE2:Hg19::chr12:129304411..129304414,-#_5a5321b3923df58e622e2ffe862f37a8 | p11@SLC15A4 |
6.24e-88 | FFCP PHASE1:Hg19::chr12:44467399..44467407,+#_5a5321b3923df58e622e2ffe862f37a8 | p12@TMEM117 |
9.74e-88 | FFCP PHASE1:Hg19::chr5:33514132..33514156,+#_958def1af071bf3d3cb57b3e0c098bc7 | p@chr5:33514132..33514156, + |
9.74e-88 | FFCP PHASE1:Hg19::chr11:71869850..71869861,+#_958def1af071bf3d3cb57b3e0c098bc7 | p1@ENST00000544535 |
9.74e-88 | FFCP PHASE2:Hg19::chr5:33514132..33514156,+#_958def1af071bf3d3cb57b3e0c098bc7 | p@chr5:33514132..33514156, + |
9.74e-88 | FFCP PHASE2:Hg19::chr11:71869850..71869861,+#_958def1af071bf3d3cb57b3e0c098bc7 | p1@ENST00000544535 |
9.74e-88 | FFCP PHASE1:Hg19::chr8:12803139..12803144,+#_958def1af071bf3d3cb57b3e0c098bc7 | p23@KIAA1456 |
9.74e-88 | FFCP PHASE2:Hg19::chr18:29172879..29172882,+#_958def1af071bf3d3cb57b3e0c098bc7 | p5@TTR |
9.74e-88 | FFCP PHASE2:Hg19::chr8:12803139..12803144,+#_958def1af071bf3d3cb57b3e0c098bc7 | p23@KIAA1456 |
9.74e-88 | FFCP PHASE1:Hg19::chr18:29172879..29172882,+#_958def1af071bf3d3cb57b3e0c098bc7 | p5@TTR |
1.52e-87 | FFCP PHASE1:Hg19::chr5:126959224..126959239,+#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr5:126959224..126959239, + |
1.52e-87 | FFCP PHASE1:Hg19::chr16:49670005..49670020,-#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr16:49670005..49670020, - |
1.52e-87 | FFCP PHASE1:Hg19::chr11:111191106..111191110,+#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr11:111191106..111191110, + |
1.52e-87 | FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_0c9924a32c250f1849968fe3aa9eb1f3 | p5@C10orf105 |
1.52e-87 | FFCP PHASE2:Hg19::chr5:126959224..126959239,+#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr5:126959224..126959239, + |
1.52e-87 | FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_0c9924a32c250f1849968fe3aa9eb1f3 | p5@C10orf105 |
1.52e-87 | FFCP PHASE2:Hg19::chr11:111191106..111191110,+#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr11:111191106..111191110, + |
1.52e-87 | FFCP PHASE2:Hg19::chr16:49670005..49670020,-#_0c9924a32c250f1849968fe3aa9eb1f3 | p@chr16:49670005..49670020, - |
5.41e-85 | FFCP PHASE2:Hg19::chr10:73479546..73479553,-#_bf4f8ad227fc47dc5891f8ad275fe075 | p4@C10orf105 |
5.41e-85 | FFCP PHASE1:Hg19::chr10:73479546..73479553,-#_bf4f8ad227fc47dc5891f8ad275fe075 | p4@C10orf105 |
5.41e-85 | FFCP PHASE1:Hg19::chr2:69741832..69741847,-#_bf4f8ad227fc47dc5891f8ad275fe075 | p@chr2:69741832..69741847, - |
5.41e-85 | FFCP PHASE2:Hg19::chr2:69741832..69741847,-#_bf4f8ad227fc47dc5891f8ad275fe075 | p@chr2:69741832..69741847, - |
7.21e-85 | FFCP PHASE2:Hg19::chr5:150050170..150050182,+#_b4bdbe9d367fa2817a88b2a552ab8de2 | p@chr5:150050170..150050182, + |
7.21e-85 | FFCP PHASE1:Hg19::chr5:150050170..150050182,+#_b4bdbe9d367fa2817a88b2a552ab8de2 | p@chr5:150050170..150050182, + |
2.27e-84 | FFCP PHASE1:Hg19::chr15:99666457..99666462,+#_ce0e50efc20a92076a03ef5db91bf5f6 | p@chr15:99666457..99666462, + |
2.27e-84 | FFCP PHASE2:Hg19::chr15:99666457..99666462,+#_ce0e50efc20a92076a03ef5db91bf5f6 | p@chr15:99666457..99666462, + |
3.03e-84 | FFCP PHASE2:Hg19::chr17:42993851..42993858,-#_962b3ca5ef8f94e59527ef74eb8c1bc3 | p@chr17:42993851..42993858, - |
3.03e-84 | FFCP PHASE1:Hg19::chr17:42993851..42993858,-#_962b3ca5ef8f94e59527ef74eb8c1bc3 | p@chr17:42993851..42993858, - |
4.03e-84 | FFCP PHASE1:Hg19::chr17:65489258..65489261,-#_a6f292714c3230ce3a101e7f6dbca2a5 | p@chr17:65489258..65489261, - |
4.03e-84 | FFCP PHASE2:Hg19::chr17:65489258..65489261,-#_a6f292714c3230ce3a101e7f6dbca2a5 | p@chr17:65489258..65489261, - |
1.66e-74 | FFCP PHASE2:Hg19::chr10:18242120..18242136,+#_f32788d11c38c40374df11a7780271d8 | p4@SLC39A12 |
1.66e-74 | FFCP PHASE1:Hg19::chr10:18242120..18242136,+#_f32788d11c38c40374df11a7780271d8 | p4@SLC39A12 |
2.14e-74 | FFCP PHASE1:Hg19::chr12:47779637..47779662,-#_fb5896f223aa0da30588ae0503617cb8 | p@chr12:47779637..47779662, - |
2.14e-74 | FFCP PHASE1:Hg19::chr9:128998376..128998387,-#_fb5896f223aa0da30588ae0503617cb8 | p@chr9:128998376..128998387, - |
2.14e-74 | FFCP PHASE2:Hg19::chr12:47779637..47779662,-#_fb5896f223aa0da30588ae0503617cb8 | p@chr12:47779637..47779662, - |
2.14e-74 | FFCP PHASE2:Hg19::chr9:128998376..128998387,-#_fb5896f223aa0da30588ae0503617cb8 | p@chr9:128998376..128998387, - |
7.51e-74 | FFCP PHASE1:Hg19::chr6:151054854..151054865,+#_cde45bdffcc7ce78156f750348a5756b | p17@PLEKHG1 |
7.51e-74 | FFCP PHASE2:Hg19::chr6:151054854..151054865,+#_cde45bdffcc7ce78156f750348a5756b | p17@PLEKHG1 |
9.82e-67 | FFCP PHASE1:Hg19::chr7:129015671..129015685,+#_c5c9df535b4211af1045612322857c79 | p11@AHCYL2 |
9.82e-67 | FFCP PHASE1:Hg19::chr5:35089843..35089860,-#_c5c9df535b4211af1045612322857c79 | p7@PRLR |
9.82e-67 | FFCP PHASE2:Hg19::chr7:129015671..129015685,+#_c5c9df535b4211af1045612322857c79 | p11@AHCYL2 |
9.82e-67 | FFCP PHASE2:Hg19::chr5:35089843..35089860,-#_c5c9df535b4211af1045612322857c79 | p7@PRLR |
1.71e-66 | FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_f718344480f949c7f9a2b96000f62ea9 | p@chr9:20927844..20927855, + |
1.71e-66 | FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_f718344480f949c7f9a2b96000f62ea9 | p@chr9:20927844..20927855, + |
1.92e-66 | FFCP PHASE2:Hg19::chr11:20621148..20621166,+#_7a267860ed1e359307780d303a636ccc | p1@SLC6A5 |
1.92e-66 | FFCP PHASE1:Hg19::chr11:20621148..20621166,+#_7a267860ed1e359307780d303a636ccc | p1@SLC6A5 |
2.39e-66 | FFCP PHASE1:Hg19::chr7:129015616..129015619,+#_71ca6147e3aa3c37cbce10ec96d64b62 | p38@AHCYL2 |
2.39e-66 | FFCP PHASE2:Hg19::chr7:129015511..129015519,+#_71ca6147e3aa3c37cbce10ec96d64b62 | p30@AHCYL2 |
2.39e-66 | FFCP PHASE1:Hg19::chr9:5954514..5954521,-#_71ca6147e3aa3c37cbce10ec96d64b62 | p18@KIAA2026 |
2.39e-66 | FFCP PHASE2:Hg19::chr7:129015616..129015619,+#_71ca6147e3aa3c37cbce10ec96d64b62 | p38@AHCYL2 |
2.39e-66 | FFCP PHASE1:Hg19::chr7:129015511..129015519,+#_71ca6147e3aa3c37cbce10ec96d64b62 | p30@AHCYL2 |
2.39e-66 | FFCP PHASE2:Hg19::chr9:5954514..5954521,-#_71ca6147e3aa3c37cbce10ec96d64b62 | p18@KIAA2026 |
2.4e-66 | FFCP PHASE1:Hg19::chr7:150529074..150529076,+#_a4efbe9c9ddc1edcae172f5a662b834b | p@chr7:150529074..150529076, + |
2.4e-66 | FFCP PHASE2:Hg19::chr3:59750150..59750155,-#_a4efbe9c9ddc1edcae172f5a662b834b | p@chr3:59750150..59750155, - |
2.4e-66 | FFCP PHASE2:Hg19::chr17:48913152..48913158,+#_a4efbe9c9ddc1edcae172f5a662b834b | p9@WFIKKN2 |
2.4e-66 | FFCP PHASE1:Hg19::chr3:59750150..59750155,-#_a4efbe9c9ddc1edcae172f5a662b834b | p@chr3:59750150..59750155, - |
2.4e-66 | FFCP PHASE1:Hg19::chr17:48913152..48913158,+#_a4efbe9c9ddc1edcae172f5a662b834b | p9@WFIKKN2 |
2.4e-66 | FFCP PHASE2:Hg19::chr7:150529074..150529076,+#_a4efbe9c9ddc1edcae172f5a662b834b | p@chr7:150529074..150529076, + |
2.41e-66 | FFCP PHASE2:Hg19::chr10:97236225..97236232,-#_26053e81ab19c076fd1dcedc84dc55e2 | p@chr10:97236225..97236232, - |
2.41e-66 | FFCP PHASE1:Hg19::chr10:97236225..97236232,-#_26053e81ab19c076fd1dcedc84dc55e2 | p@chr10:97236225..97236232, - |
3.35e-66 | FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_9c5274f834121ed99dd3af50dbeba805 | p@chr3:10706167..10706179, - |
3.35e-66 | FFCP PHASE2:Hg19::chr3:125997081..125997085,+#_9c5274f834121ed99dd3af50dbeba805 | p@chr3:125997081..125997085, + |