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{{UBERON
{{UBERON
|id=UBERON:0002294
|alt_id=UBERON:FMA_79646-MA_0001273
|name=biliary system
|namespace=
|def="Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
|xref=FMA:79646;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5d/Digestive_system_showing_bile_duct.png/200px-Digestive_system_showing_bile_duct.png;;SCTID:361354009
|is_a=UBERON:0000467
|synonym="biliary apparatus" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_79646-MA_0001273
|disjoint_from=UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|has_quality=
|has_quality=
|id=UBERON:0002294
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=biliary system
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002423
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="biliary apparatus" EXACT []
|union_of=
|xref=FMA:79646;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5d/Digestive_system_showing_bile_duct.png/200px-Digestive_system_showing_bile_duct.png;;SCTID:361354009
}}
}}

Latest revision as of 17:28, 12 September 2014

Name:biliary system
Namespace:FANTOM
Definition:"Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
Xrefs:
links:

FMA:79646
[ 200px-Digestive_system_showing_bile_duct.png 200px-Digestive_system_showing_bile_duct.png]

SCTID:361354009
Synonyms: "biliary apparatus" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_79646-MA_0001273
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
part_of:UBERON:0002423(hepatobiliary system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system)
part of:UBERON:0001173 (biliary tree),UBERON:0002394 (bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002294 (biliary system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:32178407..32178408, -

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