Personal tools

Difference between revisions of "UBERON:0002296"

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0002296 |name=dorsal mesentery |namespace= |def="The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]." [Wikipedia:Dorsal_m...")
 
Line 21: Line 21:
 
|part_of=UBERON:0009664
 
|part_of=UBERON:0009664
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 +
|is_obsolete=
 +
|preceded_by=
 
}}
 
}}

Revision as of 08:16, 15 June 2012

Name:dorsal mesentery
Definition:"The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]." [Wikipedia:Dorsal_mesentery, Wikipedia:Mesentery#Development, ZFIN:curator]
Xrefs:
links:

EHDAA:3019
EHDAA:3033
EHDAA:3921
EHDAA:3934
EHDAA:3957
EHDAA:3971
EHDAA2:0004560
FMA:79795
[ 200px-Gray985.png 200px-Gray985.png]
SCTID:308823000
TAO:0005130

ZFA:0005130
Synonyms: "dorsal mesogastrium" RELATED [Wikipedia:Dorsal_mesentery]
Alt_id: UBERON:FMA_79795-ZFA_0005130
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002050(embryonic structure),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0009664(gut mesentery)



Children

develops from:UBERON:0002095 (mesentery)
part of:UBERON:0005602 (dorsal mesogastrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002296 (dorsal mesentery), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@NR5A1
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_43ad1d6e1cbbdbf46ee88828f079e354p7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_43ad1d6e1cbbdbf46ee88828f079e354p12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_43ad1d6e1cbbdbf46ee88828f079e354p11@PDLIM2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_43ad1d6e1cbbdbf46ee88828f079e354p17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_43ad1d6e1cbbdbf46ee88828f079e354p18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859603..56859606, -
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_43ad1d6e1cbbdbf46ee88828f079e354p21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_43ad1d6e1cbbdbf46ee88828f079e354p5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_43ad1d6e1cbbdbf46ee88828f079e354p19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_43ad1d6e1cbbdbf46ee88828f079e354p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_43ad1d6e1cbbdbf46ee88828f079e354p12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_43ad1d6e1cbbdbf46ee88828f079e354p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_43ad1d6e1cbbdbf46ee88828f079e354p7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_43ad1d6e1cbbdbf46ee88828f079e354p19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_43ad1d6e1cbbdbf46ee88828f079e354p60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_43ad1d6e1cbbdbf46ee88828f079e354p5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_43ad1d6e1cbbdbf46ee88828f079e354p7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859603..56859606, -
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_43ad1d6e1cbbdbf46ee88828f079e354-, p@chr10:98014943..98014960
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_43ad1d6e1cbbdbf46ee88828f079e354p10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_43ad1d6e1cbbdbf46ee88828f079e354p11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_43ad1d6e1cbbdbf46ee88828f079e354p17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_43ad1d6e1cbbdbf46ee88828f079e354p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_43ad1d6e1cbbdbf46ee88828f079e354p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_43ad1d6e1cbbdbf46ee88828f079e354p18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_43ad1d6e1cbbdbf46ee88828f079e354p60@SYNE1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_43ad1d6e1cbbdbf46ee88828f079e354p8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_43ad1d6e1cbbdbf46ee88828f079e354p8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_43ad1d6e1cbbdbf46ee88828f079e354p10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_43ad1d6e1cbbdbf46ee88828f079e354p7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_43ad1d6e1cbbdbf46ee88828f079e354p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_43ad1d6e1cbbdbf46ee88828f079e354p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_43ad1d6e1cbbdbf46ee88828f079e354p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_43ad1d6e1cbbdbf46ee88828f079e354p@chr10:98014943..98014960, -
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_43ad1d6e1cbbdbf46ee88828f079e354p21@PTAFR
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_4accb5eff2aeb588a76b8fbecfcccd15p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_4accb5eff2aeb588a76b8fbecfcccd15p15@KIF17
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_4accb5eff2aeb588a76b8fbecfcccd15p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_4accb5eff2aeb588a76b8fbecfcccd15p@chr22:36718586..36718593, -
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_4f9744a17e31635c15ed1fabc192b705p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_4f9744a17e31635c15ed1fabc192b705p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_4f9744a17e31635c15ed1fabc192b705p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_4f9744a17e31635c15ed1fabc192b705p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_4f9744a17e31635c15ed1fabc192b705p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_4f9744a17e31635c15ed1fabc192b705p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_4f9744a17e31635c15ed1fabc192b705p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_4f9744a17e31635c15ed1fabc192b705p@chr2:128321491..128321509, +