UBERON:0002544: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002544
|name=digit
|namespace=
|def="one of several most distal parts of a limb, such as fingers or toes, present in many vertebrates[WP]." [Wikipedia...") |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:MIAA_0000285-XAO_0003035-XAO_0003036 | ||
|comment=todo homology ZFA:0001588-pectoral fin distal radial. Note: This term is a GAT in FMA. Note: we elect to place a strict taxon constraint on this class - this is controversial, and may be weakened later on - see [Wikipedia:Digit_(anatomy)#Evolution]. | |comment=todo homology ZFA:0001588-pectoral fin distal radial. Note: This term is a GAT in FMA. Note: we elect to place a strict taxon constraint on this class - this is controversial, and may be weakened later on - see [Wikipedia:Digit_(anatomy)#Evolution]. | ||
|created_by= | |created_by= | ||
| | |def="one of several most distal parts of a limb, such as fingers or toes, present in many vertebrates[WP]." [Wikipedia:Digit_(anatomy)] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002544 | |||
|is_a=UBERON:0005881 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of=UBERON: | |name=digit | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0012140;;UBERON:0012354;;UBERON:5002544 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset=uberon_slim | |||
|synonym="limb digit" EXACT [MA:0000690] | |||
|union_of= | |||
|xref=AAO:0011126;;EFO:0000881;;FMA:85518;;galen:Digit;;MA:0000690;;MAT:0000285;;MIAA:0000285;;ncithesaurus:Digit;;OpenCyc:Mx4rvzLD_ZwpEbGdrcN5Y29ycA;;SCTID:361367007;;VHOG:0000944;;XAO:0003032 | |||
}} | }} | ||
Latest revision as of 17:33, 12 September 2014
| Name: | digit | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "one of several most distal parts of a limb, such as fingers or toes, present in many vertebrates[WP]." [Wikipedia:Digit_(anatomy)] | ||
| Xrefs: |
| ||
| Synonyms: | "limb digit" EXACT [MA:0000690] | ||
| Comments: | todo homology ZFA:0001588-pectoral fin distal radial. Note: This term is a GAT in FMA. Note: we elect to place a strict taxon constraint on this class - this is controversial, and may be weakened later on - see [Wikipedia:Digit_(anatomy)#Evolution]. | ||
| Alt_id: | UBERON:MIAA_0000285-XAO_0003035-XAO_0003036 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005881(limb outgrowth) |
|---|---|
| part_of: | UBERON:0012140(digitopodium region),UBERON:0012354(acropodium region),UBERON:5002544(digit plus metapodial segment) |
Children
| part of: | UBERON:0009551 (distal segment of digit) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10273-104E3
- 10301-104H4 (Fingernail (including nail plate, eponychium and hyponychium), donor2)
- 10329-105B5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002544 (digit), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
