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{{UBERON
{{UBERON
|id=UBERON:0003067
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|name=dorsolateral placode
|namespace=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
|is_a=UBERON:0009955
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|comment=
|comment=
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003067
|is_a=UBERON:0009955
|is_obsolete=
|located_in=
|located_in=
|name=dorsolateral placode
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|union_of=
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
}}
}}

Latest revision as of 17:36, 12 September 2014

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_6f69956b8073250c371333dfea6820cep@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_6f69956b8073250c371333dfea6820cep@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_6f69956b8073250c371333dfea6820cep@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_6f69956b8073250c371333dfea6820cep@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_6f69956b8073250c371333dfea6820cep21@Espn
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_6f69956b8073250c371333dfea6820cep1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_6f69956b8073250c371333dfea6820cep1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_6f69956b8073250c371333dfea6820cep@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_6f69956b8073250c371333dfea6820cep@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_6f69956b8073250c371333dfea6820cep10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_6f69956b8073250c371333dfea6820cep1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_6f69956b8073250c371333dfea6820cep@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_6f69956b8073250c371333dfea6820cep1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_6f69956b8073250c371333dfea6820cep@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_6f69956b8073250c371333dfea6820cep@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_6f69956b8073250c371333dfea6820cep@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_6f69956b8073250c371333dfea6820cep3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_6f69956b8073250c371333dfea6820cep3@Strc
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_6f69956b8073250c371333dfea6820cep@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_6f69956b8073250c371333dfea6820cep7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_6f69956b8073250c371333dfea6820cep@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_6f69956b8073250c371333dfea6820cep2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_6f69956b8073250c371333dfea6820cep12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_6f69956b8073250c371333dfea6820cep@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_6f69956b8073250c371333dfea6820cep@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_6f69956b8073250c371333dfea6820cep6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_6f69956b8073250c371333dfea6820cep@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_6f69956b8073250c371333dfea6820cep2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_6f69956b8073250c371333dfea6820cep6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_6f69956b8073250c371333dfea6820cep@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_6f69956b8073250c371333dfea6820cep@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_6f69956b8073250c371333dfea6820cep@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_6f69956b8073250c371333dfea6820cep7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_6f69956b8073250c371333dfea6820cep@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_6f69956b8073250c371333dfea6820cep@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_6f69956b8073250c371333dfea6820cep@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_6f69956b8073250c371333dfea6820cep@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_6f69956b8073250c371333dfea6820cep1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_6f69956b8073250c371333dfea6820cep@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_6f69956b8073250c371333dfea6820cep@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_6f69956b8073250c371333dfea6820cep@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_6f69956b8073250c371333dfea6820cep@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_6f69956b8073250c371333dfea6820cep@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_6f69956b8073250c371333dfea6820cep@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_6f69956b8073250c371333dfea6820cep6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_6f69956b8073250c371333dfea6820cep@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_6f69956b8073250c371333dfea6820cep2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_6f69956b8073250c371333dfea6820cep@chr15:97806034..97806061, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_6f69956b8073250c371333dfea6820cep@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_6f69956b8073250c371333dfea6820cep@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_6f69956b8073250c371333dfea6820cep@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_6f69956b8073250c371333dfea6820cep@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_6f69956b8073250c371333dfea6820cep@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_6f69956b8073250c371333dfea6820cep2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_6f69956b8073250c371333dfea6820cep5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_6f69956b8073250c371333dfea6820cep2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_6f69956b8073250c371333dfea6820cep@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_6f69956b8073250c371333dfea6820cep@chr5:28035962..28035983, +
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_6f69956b8073250c371333dfea6820cep@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_6f69956b8073250c371333dfea6820cep2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_6f69956b8073250c371333dfea6820cep@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_6f69956b8073250c371333dfea6820cep@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_6f69956b8073250c371333dfea6820cep1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_6f69956b8073250c371333dfea6820cep@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_6f69956b8073250c371333dfea6820cep@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_6f69956b8073250c371333dfea6820cep@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_6f69956b8073250c371333dfea6820cep@chr9:42206730..42206739, -

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