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UBERON:0003269: Difference between revisions

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Line 12: Line 12:
|is_obsolete=
|is_obsolete=
|located_in=
|located_in=
|name=skeletal muscle of eye
|name=skeletal muscle tissue of eye
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000019
|part_of=UBERON:0000019

Latest revision as of 17:39, 12 September 2014

Name:skeletal muscle tissue of eye
Namespace:FANTOM
Definition:"A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA2:0000486
EHDAA:2923

EMAPA:17844
Synonyms: "eye skeletal muscle" EXACT [OBOL:automatic]
"eye skeletal muscle group" RELATED [EHDAA2:0000486]
"eye skeletal muscle tissue" EXACT [OBOL:automatic]
"skeletal muscle tissue of eye" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001134(skeletal muscle tissue),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0000019(camera-type eye)



Children

part of:UBERON:0001601 (extra-ocular muscle),UBERON:0006230 (extrinsic ocular pre-muscle mass)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003269 (skeletal muscle tissue of eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results