Personal tools

UBERON:0003269: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0003269 |name=skeletal muscle of eye |namespace= |def="A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic] |xref=EHDAA...")
 
No edit summary
Line 21: Line 21:
|part_of=UBERON:0000019
|part_of=UBERON:0000019
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:18, 15 June 2012

Name:skeletal muscle of eye
Definition:"A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA:2923
EHDAA2:0000486

EMAPA:17844
Synonyms: "eye skeletal muscle" EXACT [OBOL:automatic]
"eye skeletal muscle tissue" EXACT [OBOL:automatic]
"skeletal muscle tissue of eye" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003899(skeletal muscle of head),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0000019(camera-type eye)



Children

part of:UBERON:0001601 (extra-ocular muscle),UBERON:0006230 (extrinsic ocular pre-muscle mass)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003269 (skeletal muscle of eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results