Personal tools

UBERON:0003897: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0003897 |name=axial muscle |namespace= |def="A skeletal muscle of the trunk or head." [] |xref=EHDAA:5982;;EHDAA2:0000159;;EMAPA:18166;;EMAPA:18167;;R...")
 
No edit summary
 
(One intermediate revision by the same user not shown)
Line 4: Line 4:
|namespace=
|namespace=
|def="A skeletal muscle of the trunk or head." []
|def="A skeletal muscle of the trunk or head." []
|xref=EHDAA:5982;;EHDAA2:0000159;;EMAPA:18166;;EMAPA:18167;;RETIRED_EHDAA2:0000160
|xref=EHDAA2:0000159;;EHDAA:5982;;EMAPA:18166;;EMAPA:18167;;RETIRED_EHDAA2:0000160;;TAO:0001954
|is_a=UBERON:0001134
|is_a=UBERON:0001134
|synonym=
|synonym=
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
Line 21: Line 20:
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Latest revision as of 17:04, 26 June 2012

Name:axial muscle
Definition:"A skeletal muscle of the trunk or head." []
Xrefs:
links:

EHDAA2:0000159
EHDAA:5982
EMAPA:18166
EMAPA:18167
RETIRED_EHDAA2:0000160

TAO:0001954

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001134(skeletal muscle tissue)
union_of:UBERON:0003898(skeletal muscle of trunk),UBERON:0003899(skeletal muscle of head)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003897 (axial muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results