Personal tools

UBERON:0004852

From FANTOM5_SSTAR

Revision as of 08:48, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:cardiovascular system endothelium
Namespace:FANTOM
Definition:"An endothelium that is part of the cardiovascular system." [UBERON:cjm]
Xrefs:
links:

BTO:0001853
GAID:519
MA:0000717
MESH:A.07.231.330
TAO:0002171
VHOG:0001217
XAO:0000356

ZFA:0001639
Comments:consider merging with 'endothelium'
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0001986(endothelium)
part_of:UBERON:0004535(cardiovascular system)



Children

is a:UBERON:0004638 (blood vessel endothelium),UBERON:0004700 (arterial system endothelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004852 (cardiovascular system endothelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
8.63e-150FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295p@chr18:33046982..33046991, -
8.63e-150FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295p@chr18:33046982..33046991, -
2.4e-126FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383p1@MIR216A
2.4e-126FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383p1@MIR216A
1.75e-121FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3dep@chr6:78171774..78171792, +
1.75e-121FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3dep@chr6:78171774..78171792, +
2.8e-121FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7fp@chr18:33047157..33047168, -
2.8e-121FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7fp@chr18:33047157..33047168, -
2.32e-119FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544p12@PARP12
2.32e-119FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544p12@PARP12
3.95e-117FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675p5@PARP12
3.95e-117FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675p5@PARP12
1.12e-116FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4p12@KSR2
1.12e-116FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4p12@KSR2
4.37e-116FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817p@chr3:43538305..43538325, -
4.37e-116FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817p@chr3:43538305..43538325, -
6.53e-113FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016p@chrX:71299684..71299699, +
6.53e-113FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016p@chrX:71299684..71299699, +
2.12e-108FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907p7@WDFY4
2.12e-108FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907p7@WDFY4
3.85e-107FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45p6@WDFY4
3.85e-107FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45p6@WDFY4
3.44e-106FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140p2@BMX
3.44e-106FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140p2@BMX
1.68e-105FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970deap@chr6:3753188..3753192, -
1.68e-105FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970deap@chr6:3753188..3753192, -
3.71e-103FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2p1@ENST00000513158
3.71e-103FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2p1@ENST00000513158
8.1e-103FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9p@chr10:99655692..99655725, -
8.1e-103FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9p@chr10:99655692..99655725, -
1.53e-102FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09cp8@GIMAP6
1.53e-102FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09cp8@GIMAP6
3.68e-102FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0p4@EIF2B2
3.68e-102FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0p4@EIF2B2
4.84e-102FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67dp@chr6:78171746..78171769, +
4.84e-102FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67dp@chr6:78171746..78171769, +
2.83e-101FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68p@chr6:148664333..148664338, -
2.83e-101FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68p@chr6:148664333..148664338, -
1.76e-99FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74p5@CLEC14A
1.76e-99FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74p5@CLEC14A
5.12e-99FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3p15@RAI14
5.12e-99FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3p15@RAI14
3.9e-98FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bdp5@ICAM2
3.9e-98FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bdp5@ICAM2
1.28e-97FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156p15@HHIP
1.28e-97FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156p15@HHIP
1.51e-97FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8p@chr9:139563124..139563129, +
1.51e-97FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8p@chr9:139563124..139563129, +
5.66e-97FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666dp10@NOS3
5.66e-97FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666dp10@NOS3
1.44e-96FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4p11@UIMC1
1.44e-96FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4p11@UIMC1
3.94e-95FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1p6@CLEC14A
3.94e-95FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1p6@CLEC14A
4.62e-95FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3p@chr11:124761247..124761258, -
4.62e-95FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3p@chr11:124761247..124761258, -
6.81e-95FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89p@chr1:22264210..22264241, +
6.81e-95FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89p@chr1:22264210..22264241, +
5.14e-93FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbedp@chr9:139543445..139543462, +
5.14e-93FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbedp@chr9:139543445..139543462, +
3.62e-92FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62p@chr13:32835894..32835907, +
3.62e-92FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62p@chr13:32835894..32835907, +
6.53e-92FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308bp@chr9:139541134..139541139, +
6.53e-92FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308bp@chr9:139541134..139541139, +
8.31e-92FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534p@chr12:105863705..105863718, +
8.31e-92FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534p@chr12:105863705..105863718, +
1.78e-91FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71p@chr19:41985048..41985050, -
1.78e-91FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71p@chr19:41985048..41985050, -
1.27e-90FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cbp@chr12:105863636..105863650, +
1.27e-90FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cbp@chr12:105863636..105863650, +
4.84e-90FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00+, p@chr16:2220383..2220402
4.84e-90FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00p@chr16:2220383..2220402, +
4.93e-90FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5p@chr9:139543390..139543404, +
4.93e-90FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5p@chr9:139543390..139543404, +
2.05e-88FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710p14@PTPRE
2.05e-88FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710p14@PTPRE
2.37e-88FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51p@chr13:32835912..32835936, +
2.37e-88FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51p@chr13:32835912..32835936, +
3.48e-88FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dcp@chr6:11607864..11607875, +
3.48e-88FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dcp@chr6:11607864..11607875, +
8.3e-88FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9p1@ENST00000418525
8.3e-88FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9p1@ENST00000418525
1.93e-87FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bbp@chr12:96830523..96830532, +
1.93e-87FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bbp@chr12:96830523..96830532, +
3.38e-87FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216bp11@MANSC1
3.38e-87FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216bp11@MANSC1
3.45e-85FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5p@chr18:33047117..33047138, -
3.45e-85FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5p@chr18:33047117..33047138, -
4.2e-85FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81eap@chr18:33047076..33047099, -
4.2e-85FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81eap@chr18:33047076..33047099, -
1.18e-84FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6p@chr1:28785607..28785624, +
1.18e-84FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6p@chr1:28785607..28785624, +
1.82e-84FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4p@chr3:58034268..58034295, +
1.82e-84FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4p@chr3:58034268..58034295, +
3.24e-84FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61p@chr15:39423060..39423066, +
3.24e-84FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61p@chr15:39423060..39423066, +
1.28e-80FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672cp4@FAM124B
1.28e-80FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672cp4@FAM124B
3.03e-80FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0ap4@ABI3
3.03e-80FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0ap4@ABI3

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=UBERON:0004852&oldid=3277702"