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{{UBERON
{{UBERON
|id=UBERON:0006242
|alt_id=
|name=gall bladder primordium
|namespace=
|def=
|xref=EHDAA:3047;;EHDAA2:0000700;;EMAPA:16713;;EMAPA:16842;;XAO:0004205
|is_a=UBERON:0001048;;UBERON:0005423
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=emapa_ehdaa2
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006242
|is_a=UBERON:0001048
|is_obsolete=
|located_in=
|located_in=
|name=gall bladder primordium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000922;;UBERON:0002423;;UBERON:0004912
|part_of=UBERON:0000922;;UBERON:0002423;;UBERON:0004912
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=emapa_ehdaa2
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0000700;;EHDAA:3047;;EMAPA:16713;;EMAPA:16842;;XAO:0004205
}}
}}

Latest revision as of 17:57, 12 September 2014

Name:gall bladder primordium
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0000700
EHDAA:3047
EMAPA:16713
EMAPA:16842

XAO:0004205
Subset: emapa_ehdaa2

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001048(primordium)
part_of:UBERON:0000922(embryo),UBERON:0002423(hepatobiliary system),UBERON:0004912(biliary bud)



Children

develops from:UBERON:0002110 (gallbladder)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006242 (gall bladder primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.39e-66FFCP PHASE2:Hg19::chr21:43783664..43783667,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr21:43783664..43783667, +
2.39e-66FFCP PHASE1:Hg19::chr4:189258158..189258183,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:189258158..189258183, -
2.39e-66FFCP PHASE1:Hg19::chr11:1252161..1252166,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr11:1252161..1252166, +
2.39e-66FFCP PHASE1:Hg19::chr20:4100562..4100570,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p4@BC027448
2.39e-66FFCP PHASE2:Hg19::chr5:25649889..25649911,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr5:25649889..25649911, -
2.39e-66FFCP PHASE1:Hg19::chr18:2351233..2351242,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr18:2351233..2351242, +
2.39e-66FFCP PHASE1:Hg19::chr9:95737958..95737978,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr9:95737958..95737978, +
2.39e-66FFCP PHASE2:Hg19::chr14:103470614..103470619,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p17@CDC42BPB
2.39e-66FFCP PHASE2:Hg19::chr4:26491064..26491072,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:26491064..26491072, -
2.39e-66FFCP PHASE1:Hg19::chr10:103952998..103953003,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr10:103952998..103953003, -
2.39e-66FFCP PHASE1:Hg19::chr2:42157172..42157179,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr2:42157172..42157179, -
2.39e-66FFCP PHASE1:Hg19::chr11:1247434..1247435,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr11:1247434..1247435, +
2.39e-66FFCP PHASE2:Hg19::chr11:1252161..1252166,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr11:1252161..1252166, +
2.39e-66FFCP PHASE1:Hg19::chr20:4100596..4100603,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p5@BC027448
2.39e-66FFCP PHASE2:Hg19::chr10:103952998..103953003,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr10:103952998..103953003, -
2.39e-66FFCP PHASE2:Hg19::chr4:117626532..117626537,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:117626532..117626537, +
2.39e-66FFCP PHASE2:Hg19::chr4:189258158..189258183,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:189258158..189258183, -
2.39e-66FFCP PHASE1:Hg19::chr14:38091563..38091607,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr14:38091563..38091607, +
2.39e-66FFCP PHASE2:Hg19::chr20:4100562..4100570,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p4@BC027448
2.39e-66FFCP PHASE1:Hg19::chr3:145127555..145127558,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr3:145127555..145127558, +
2.39e-66FFCP PHASE1:Hg19::chr3:193561605..193561612,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p3@ENST00000439074
2.39e-66FFCP PHASE1:Hg19::chr2:42157397..42157411,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr2:42157397..42157411, -
2.39e-66FFCP PHASE1:Hg19::chr21:43783664..43783667,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr21:43783664..43783667, +
2.39e-66FFCP PHASE2:Hg19::chr18:2351233..2351242,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr18:2351233..2351242, +
2.39e-66FFCP PHASE2:Hg19::chr2:42157172..42157179,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr2:42157172..42157179, -
2.39e-66FFCP PHASE2:Hg19::chr11:1247434..1247435,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr11:1247434..1247435, +
2.39e-66FFCP PHASE2:Hg19::chr20:4100596..4100603,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p5@BC027448
2.39e-66FFCP PHASE1:Hg19::chr5:25649889..25649911,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr5:25649889..25649911, -
2.39e-66FFCP PHASE2:Hg19::chr3:145127555..145127558,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr3:145127555..145127558, +
2.39e-66FFCP PHASE2:Hg19::chr2:42157397..42157411,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr2:42157397..42157411, -
2.39e-66FFCP PHASE1:Hg19::chr4:117626532..117626537,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:117626532..117626537, +
2.39e-66FFCP PHASE2:Hg19::chr14:38091563..38091607,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr14:38091563..38091607, +
2.39e-66FFCP PHASE2:Hg19::chr3:193561605..193561612,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p3@ENST00000439074
2.39e-66FFCP PHASE2:Hg19::chr9:95737958..95737978,+#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr9:95737958..95737978, +
2.39e-66FFCP PHASE1:Hg19::chr4:26491064..26491072,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p@chr4:26491064..26491072, -
2.39e-66FFCP PHASE1:Hg19::chr14:103470614..103470619,-#_5ecd39edf05f68e7f0ccb42c1f251ce5p17@CDC42BPB
2.4e-66FFCP PHASE1:Hg19::chr17:79429043..79429051,-#_ead4ee81a734b43b0443cef7cd902972p@chr17:79429043..79429051, -
2.4e-66FFCP PHASE2:Hg19::chr17:79429043..79429051,-#_ead4ee81a734b43b0443cef7cd902972p@chr17:79429043..79429051, -
4.89e-53FFCP PHASE1:Hg19::chr11:111154964..111154975,+#_317c277b37a15929b8bf1a0db96dd5a0p4@C11orf53
4.89e-53FFCP PHASE2:Hg19::chr11:111154964..111154975,+#_317c277b37a15929b8bf1a0db96dd5a0p4@C11orf53
4.27e-34FFCP PHASE2:Hg19::chr21:28226981..28227000,+#_f5597afb4660e0408118498357161610p@chr21:28226981..28227000, +
4.27e-34FFCP PHASE1:Hg19::chr11:86501763..86501768,+#_f5597afb4660e0408118498357161610p33@PRSS23
4.27e-34FFCP PHASE1:Hg19::chr11:1262749..1262754,+#_f5597afb4660e0408118498357161610p@chr11:1262749..1262754, +
4.27e-34FFCP PHASE2:Hg19::chr5:147645292..147645302,+#_f5597afb4660e0408118498357161610p@chr5:147645292..147645302, +
4.27e-34FFCP PHASE1:Hg19::chr18:2351165..2351175,+#_f5597afb4660e0408118498357161610p@chr18:2351165..2351175, +
4.27e-34FFCP PHASE1:Hg19::chr9:95737369..95737393,+#_f5597afb4660e0408118498357161610p18@FGD3
4.27e-34FFCP PHASE2:Hg19::chr17:67559529..67559532,+#_f5597afb4660e0408118498357161610p@chr17:67559529..67559532, +
4.27e-34FFCP PHASE1:Hg19::chr11:1263382..1263385,+#_f5597afb4660e0408118498357161610p@chr11:1263382..1263385, +
4.27e-34FFCP PHASE2:Hg19::chrX:29431271..29431280,+#_f5597afb4660e0408118498357161610p@chrX:29431271..29431280, +
4.27e-34FFCP PHASE2:Hg19::chr12:113448406..113448411,+#_f5597afb4660e0408118498357161610p14@OAS2
4.27e-34FFCP PHASE1:Hg19::chr7:114026271..114026287,-#_f5597afb4660e0408118498357161610p@chr7:114026271..114026287, -
4.27e-34FFCP PHASE1:Hg19::chr1:187929602..187929615,+#_f5597afb4660e0408118498357161610p@chr1:187929602..187929615, +
4.27e-34FFCP PHASE1:Hg19::chr10:124050589..124050596,+#_f5597afb4660e0408118498357161610p15@BTBD16
4.27e-34FFCP PHASE2:Hg19::chr18:35871337..35871346,+#_f5597afb4660e0408118498357161610p@chr18:35871337..35871346, +
4.27e-34FFCP PHASE2:Hg19::chr11:1262749..1262754,+#_f5597afb4660e0408118498357161610p@chr11:1262749..1262754, +
4.27e-34FFCP PHASE2:Hg19::chr10:124050589..124050596,+#_f5597afb4660e0408118498357161610p15@BTBD16
4.27e-34FFCP PHASE2:Hg19::chr19:28401158..28401162,-#_f5597afb4660e0408118498357161610p@chr19:28401158..28401162, -
4.27e-34FFCP PHASE1:Hg19::chr11:1260725..1260734,+#_f5597afb4660e0408118498357161610p@chr11:1260725..1260734, +
4.27e-34FFCP PHASE2:Hg19::chr18:2351165..2351175,+#_f5597afb4660e0408118498357161610p@chr18:2351165..2351175, +
4.27e-34FFCP PHASE1:Hg19::chr5:147644551..147644576,+#_f5597afb4660e0408118498357161610p@chr5:147644551..147644576, +
4.27e-34FFCP PHASE1:Hg19::chr5:111570472..111570478,-#_f5597afb4660e0408118498357161610p@chr5:111570472..111570478, -
4.27e-34FFCP PHASE1:Hg19::chr4:190861941..190861951,+#_f5597afb4660e0408118498357161610p3@FRG1
4.27e-34FFCP PHASE1:Hg19::chr21:43770332..43770340,-#_f5597afb4660e0408118498357161610p@chr21:43770332..43770340, -
4.27e-34FFCP PHASE2:Hg19::chr1:187929602..187929615,+#_f5597afb4660e0408118498357161610p@chr1:187929602..187929615, +
4.27e-34FFCP PHASE2:Hg19::chr11:86501763..86501768,+#_f5597afb4660e0408118498357161610p33@PRSS23
4.27e-34FFCP PHASE2:Hg19::chr6:13191432..13191436,-#_f5597afb4660e0408118498357161610p@chr6:13191432..13191436, -
4.27e-34FFCP PHASE2:Hg19::chr7:114026271..114026287,-#_f5597afb4660e0408118498357161610p@chr7:114026271..114026287, -
4.27e-34FFCP PHASE2:Hg19::chr11:1263382..1263385,+#_f5597afb4660e0408118498357161610p@chr11:1263382..1263385, +
4.27e-34FFCP PHASE1:Hg19::chr5:147645292..147645302,+#_f5597afb4660e0408118498357161610p@chr5:147645292..147645302, +
4.27e-34FFCP PHASE1:Hg19::chr11:1247439..1247442,+#_f5597afb4660e0408118498357161610p@chr11:1247439..1247442, +
4.27e-34FFCP PHASE2:Hg19::chr11:1260725..1260734,+#_f5597afb4660e0408118498357161610p@chr11:1260725..1260734, +
4.27e-34FFCP PHASE2:Hg19::chr9:95737369..95737393,+#_f5597afb4660e0408118498357161610p18@FGD3
4.27e-34FFCP PHASE1:Hg19::chr12:113448406..113448411,+#_f5597afb4660e0408118498357161610p14@OAS2
4.27e-34FFCP PHASE1:Hg19::chrX:29431271..29431280,+#_f5597afb4660e0408118498357161610p@chrX:29431271..29431280, +
4.27e-34FFCP PHASE1:Hg19::chr21:28226981..28227000,+#_f5597afb4660e0408118498357161610p@chr21:28226981..28227000, +
4.27e-34FFCP PHASE2:Hg19::chr21:43770332..43770340,-#_f5597afb4660e0408118498357161610p@chr21:43770332..43770340, -
4.27e-34FFCP PHASE1:Hg19::chr17:67559529..67559532,+#_f5597afb4660e0408118498357161610p@chr17:67559529..67559532, +
4.27e-34FFCP PHASE2:Hg19::chr5:147644551..147644576,+#_f5597afb4660e0408118498357161610p@chr5:147644551..147644576, +
4.27e-34FFCP PHASE2:Hg19::chr11:1247439..1247442,+#_f5597afb4660e0408118498357161610p@chr11:1247439..1247442, +
4.27e-34FFCP PHASE1:Hg19::chr19:28401158..28401162,-#_f5597afb4660e0408118498357161610p@chr19:28401158..28401162, -
4.27e-34FFCP PHASE2:Hg19::chr4:190861941..190861951,+#_f5597afb4660e0408118498357161610p3@FRG1
4.27e-34FFCP PHASE1:Hg19::chr18:35871337..35871346,+#_f5597afb4660e0408118498357161610p@chr18:35871337..35871346, +
4.27e-34FFCP PHASE2:Hg19::chr5:111570472..111570478,-#_f5597afb4660e0408118498357161610p@chr5:111570472..111570478, -
4.27e-34FFCP PHASE1:Hg19::chr6:13191432..13191436,-#_f5597afb4660e0408118498357161610p@chr6:13191432..13191436, -
5.96e-34FFCP PHASE2:Hg19::chr5:498417..498421,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr5:498417..498421, -
5.96e-34FFCP PHASE2:Hg19::chr1:228131903..228131923,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr1:228131903..228131923, -
5.96e-34FFCP PHASE1:Hg19::chr18:69477752..69477762,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr18:69477752..69477762, +
5.96e-34FFCP PHASE1:Hg19::chr19:36757642..36757645,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr19:36757642..36757645, +
5.96e-34FFCP PHASE1:Hg19::chr17:68643476..68643477,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr17:68643476..68643477, +
5.96e-34FFCP PHASE2:Hg19::chr17:37880326..37880328,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr17:37880326..37880328, -
5.96e-34FFCP PHASE1:Hg19::chr22:50723475..50723477,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr22:50723475..50723477, -
5.96e-34FFCP PHASE1:Hg19::chr2:27529092..27529098,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr2:27529092..27529098, +
5.96e-34FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr4:59982412..59982425, +
5.96e-34FFCP PHASE1:Hg19::chr12:127102703..127102711,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr12:127102703..127102711, -
5.96e-34FFCP PHASE2:Hg19::chr7:117355942..117355945,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr7:117355942..117355945, -
5.96e-34FFCP PHASE2:Hg19::chr18:61420303..61420306,+#_bde335f5d2cc1e00dbd225b94bfd698dp17@SERPINB7
5.96e-34FFCP PHASE2:Hg19::chr5:499767..499777,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr5:499767..499777, -
5.96e-34FFCP PHASE2:Hg19::chr3:106851639..106851650,-#_bde335f5d2cc1e00dbd225b94bfd698dp@chr3:106851639..106851650, -
5.96e-34FFCP PHASE2:Hg19::chr18:69477752..69477762,+#_bde335f5d2cc1e00dbd225b94bfd698dp@chr18:69477752..69477762, +
5.96e-34FFCP PHASE2:Hg19::chr4:175184241..175184250,-#_bde335f5d2cc1e00dbd225b94bfd698dp14@FBXO8

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