UBERON:0006553: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=renal duct | |name=renal duct | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
Latest revision as of 17:57, 12 September 2014
| Name: | renal duct | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9] | ||
| Xrefs: |
| ||
| Comments: | in ZFA this is defined as part of mesonephros |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0006555(excretory tube) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0009201 (nephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:113585667..113585673,-#_9b3409e528ac533dfd8475c41e23287d | p@chr8:113585667..113585673, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_9b3409e528ac533dfd8475c41e23287d | p4@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651764..35651782,-#_9b3409e528ac533dfd8475c41e23287d | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_9b3409e528ac533dfd8475c41e23287d | p3@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650730..103650741,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:103650730..103650741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_9b3409e528ac533dfd8475c41e23287d | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_9b3409e528ac533dfd8475c41e23287d | p5@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:35252614..35252635,-#_9b3409e528ac533dfd8475c41e23287d | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_9b3409e528ac533dfd8475c41e23287d | p17@Capn5 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_9b3409e528ac533dfd8475c41e23287d | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845349..59845371,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_9b3409e528ac533dfd8475c41e23287d | p6@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_9b3409e528ac533dfd8475c41e23287d | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_9b3409e528ac533dfd8475c41e23287d | p15@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:28772042..28772046,-#_9b3409e528ac533dfd8475c41e23287d | p@chr10:28772042..28772046, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_9b3409e528ac533dfd8475c41e23287d | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:18213651..18213663,-#_9b3409e528ac533dfd8475c41e23287d | p1@Defb44-ps |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51627586..51627595,+#_9b3409e528ac533dfd8475c41e23287d | p4@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280126..50280140,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280126..50280140, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_9b3409e528ac533dfd8475c41e23287d | p2@Wfdc11 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379107..21379136,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379107..21379136, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75347689..75347703, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_9b3409e528ac533dfd8475c41e23287d | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_9b3409e528ac533dfd8475c41e23287d | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26610184..26610191,-#_9b3409e528ac533dfd8475c41e23287d | p4@Glb1l2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:148445639..148445665,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:12571771..12571780,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:12571771..12571780, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:54678915..54678922,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:54678915..54678922, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379454..31379466,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:12571771..12571780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_9b3409e528ac533dfd8475c41e23287d | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164480465..164480471,-#_9b3409e528ac533dfd8475c41e23287d | p2@Wfdc9 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:96140694..96140720, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_9b3409e528ac533dfd8475c41e23287d | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597818..89597827, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773731..110773753,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773731..110773753, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901540..116901549,-#_9b3409e528ac533dfd8475c41e23287d | p4@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:150092027..150092070,-#_9b3409e528ac533dfd8475c41e23287d | p@chr4:150092027..150092070, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302836..152302841,+#_9b3409e528ac533dfd8475c41e23287d | p6@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:164787162..164787188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380610..21380620,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21380610..21380620, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_9b3409e528ac533dfd8475c41e23287d | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35657557..35657582,-#_9b3409e528ac533dfd8475c41e23287d | p2@Gm3428 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:103896102..103896116, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:23308115..23308126,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:23308115..23308126, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:156776465..156776473, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155722..90155743, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:22547027..22547063, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75304916..75304925, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_9b3409e528ac533dfd8475c41e23287d | p3@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_9b3409e528ac533dfd8475c41e23287d | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_9b3409e528ac533dfd8475c41e23287d | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_9b3409e528ac533dfd8475c41e23287d | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:75798114..75798125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164434346..164434353, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958855..101958871, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:70761885..70761895,+#_9b3409e528ac533dfd8475c41e23287d | p@chr9:70761885..70761895, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_9b3409e528ac533dfd8475c41e23287d | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51676936..51676963,-#_9b3409e528ac533dfd8475c41e23287d | p6@Rnase12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:20219008..20219045, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87936238..87936249, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:91107095..91107103,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:91107095..91107103, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_9b3409e528ac533dfd8475c41e23287d | p@chr19:24582739..24582748, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19142604..19142612, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_9b3409e528ac533dfd8475c41e23287d | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62816857..62816866,+#_9b3409e528ac533dfd8475c41e23287d | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_9b3409e528ac533dfd8475c41e23287d | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:124447371..124447383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_9b3409e528ac533dfd8475c41e23287d | p@chr4:134913640..134913649, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_9b3409e528ac533dfd8475c41e23287d | p4@Lcn12 |
