UBERON:0009123: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003069 | |develops_from=UBERON:0003069 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0009123 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=otic cup | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 11:46, 12 September 2014
| Name: | otic cup |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003069(otic placode) |
Children
| develops from: | UBERON:0003051 (ear vesicle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_b1910012f17566919440def95cc5be02 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_b1910012f17566919440def95cc5be02 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_b1910012f17566919440def95cc5be02 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_b1910012f17566919440def95cc5be02 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_b1910012f17566919440def95cc5be02 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_b1910012f17566919440def95cc5be02 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_b1910012f17566919440def95cc5be02 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_b1910012f17566919440def95cc5be02 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_b1910012f17566919440def95cc5be02 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_b1910012f17566919440def95cc5be02 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_b1910012f17566919440def95cc5be02 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_b1910012f17566919440def95cc5be02 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_b1910012f17566919440def95cc5be02 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_b1910012f17566919440def95cc5be02 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_b1910012f17566919440def95cc5be02 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_b1910012f17566919440def95cc5be02 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_b1910012f17566919440def95cc5be02 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_b1910012f17566919440def95cc5be02 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_b1910012f17566919440def95cc5be02 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_b1910012f17566919440def95cc5be02 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_b1910012f17566919440def95cc5be02 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_b1910012f17566919440def95cc5be02 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_b1910012f17566919440def95cc5be02 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_b1910012f17566919440def95cc5be02 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_b1910012f17566919440def95cc5be02 | p4@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_b1910012f17566919440def95cc5be02 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_b1910012f17566919440def95cc5be02 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_b1910012f17566919440def95cc5be02 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_b1910012f17566919440def95cc5be02 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_b1910012f17566919440def95cc5be02 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_b1910012f17566919440def95cc5be02 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_b1910012f17566919440def95cc5be02 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_b1910012f17566919440def95cc5be02 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_b1910012f17566919440def95cc5be02 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_b1910012f17566919440def95cc5be02 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_b1910012f17566919440def95cc5be02 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_b1910012f17566919440def95cc5be02 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_b1910012f17566919440def95cc5be02 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_b1910012f17566919440def95cc5be02 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_b1910012f17566919440def95cc5be02 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_b1910012f17566919440def95cc5be02 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_b1910012f17566919440def95cc5be02 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_b1910012f17566919440def95cc5be02 | p2@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_b1910012f17566919440def95cc5be02 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_b1910012f17566919440def95cc5be02 | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_b1910012f17566919440def95cc5be02 | p9@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_b1910012f17566919440def95cc5be02 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_b1910012f17566919440def95cc5be02 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_b1910012f17566919440def95cc5be02 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_b1910012f17566919440def95cc5be02 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_b1910012f17566919440def95cc5be02 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_b1910012f17566919440def95cc5be02 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_b1910012f17566919440def95cc5be02 | p3@Fanca |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_b1910012f17566919440def95cc5be02 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_b1910012f17566919440def95cc5be02 | p3@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_b1910012f17566919440def95cc5be02 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_b1910012f17566919440def95cc5be02 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_b1910012f17566919440def95cc5be02 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_b1910012f17566919440def95cc5be02 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_b1910012f17566919440def95cc5be02 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_b1910012f17566919440def95cc5be02 | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_b1910012f17566919440def95cc5be02 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_b1910012f17566919440def95cc5be02 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_b1910012f17566919440def95cc5be02 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_b1910012f17566919440def95cc5be02 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_b1910012f17566919440def95cc5be02 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_b1910012f17566919440def95cc5be02 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_b1910012f17566919440def95cc5be02 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_b1910012f17566919440def95cc5be02 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_b1910012f17566919440def95cc5be02 | p1@Dytn |
