UBERON:0009123: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003069 | |develops_from=UBERON:0003069 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0009123 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=otic cup | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 18:04, 12 September 2014
| Name: | otic cup |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003069(otic placode) |
Children
| develops from: | UBERON:0003051 (ear vesicle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_b1910012f17566919440def95cc5be02 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_b1910012f17566919440def95cc5be02 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_b1910012f17566919440def95cc5be02 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_b1910012f17566919440def95cc5be02 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_b1910012f17566919440def95cc5be02 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_b1910012f17566919440def95cc5be02 | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_b1910012f17566919440def95cc5be02 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_b1910012f17566919440def95cc5be02 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_b1910012f17566919440def95cc5be02 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_b1910012f17566919440def95cc5be02 | p5@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_b1910012f17566919440def95cc5be02 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_b1910012f17566919440def95cc5be02 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_b1910012f17566919440def95cc5be02 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_b1910012f17566919440def95cc5be02 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_b1910012f17566919440def95cc5be02 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_b1910012f17566919440def95cc5be02 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_b1910012f17566919440def95cc5be02 | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_b1910012f17566919440def95cc5be02 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_b1910012f17566919440def95cc5be02 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_b1910012f17566919440def95cc5be02 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_b1910012f17566919440def95cc5be02 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_b1910012f17566919440def95cc5be02 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_b1910012f17566919440def95cc5be02 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_b1910012f17566919440def95cc5be02 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_b1910012f17566919440def95cc5be02 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_b1910012f17566919440def95cc5be02 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_b1910012f17566919440def95cc5be02 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_b1910012f17566919440def95cc5be02 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_b1910012f17566919440def95cc5be02 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_b1910012f17566919440def95cc5be02 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_b1910012f17566919440def95cc5be02 | p1@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_b1910012f17566919440def95cc5be02 | p10@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_b1910012f17566919440def95cc5be02 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_b1910012f17566919440def95cc5be02 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_b1910012f17566919440def95cc5be02 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_b1910012f17566919440def95cc5be02 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_b1910012f17566919440def95cc5be02 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_b1910012f17566919440def95cc5be02 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_b1910012f17566919440def95cc5be02 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_b1910012f17566919440def95cc5be02 | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_b1910012f17566919440def95cc5be02 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_b1910012f17566919440def95cc5be02 | p1@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_b1910012f17566919440def95cc5be02 | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_b1910012f17566919440def95cc5be02 | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_b1910012f17566919440def95cc5be02 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_b1910012f17566919440def95cc5be02 | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_b1910012f17566919440def95cc5be02 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_b1910012f17566919440def95cc5be02 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_b1910012f17566919440def95cc5be02 | p2@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_b1910012f17566919440def95cc5be02 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_b1910012f17566919440def95cc5be02 | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_b1910012f17566919440def95cc5be02 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_b1910012f17566919440def95cc5be02 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_b1910012f17566919440def95cc5be02 | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_b1910012f17566919440def95cc5be02 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_b1910012f17566919440def95cc5be02 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_b1910012f17566919440def95cc5be02 | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_b1910012f17566919440def95cc5be02 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_b1910012f17566919440def95cc5be02 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_b1910012f17566919440def95cc5be02 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_b1910012f17566919440def95cc5be02 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_b1910012f17566919440def95cc5be02 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_b1910012f17566919440def95cc5be02 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_b1910012f17566919440def95cc5be02 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_b1910012f17566919440def95cc5be02 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_b1910012f17566919440def95cc5be02 | p1@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_b1910012f17566919440def95cc5be02 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_b1910012f17566919440def95cc5be02 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_b1910012f17566919440def95cc5be02 | p1@Otog |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_b1910012f17566919440def95cc5be02 | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_b1910012f17566919440def95cc5be02 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_b1910012f17566919440def95cc5be02 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_b1910012f17566919440def95cc5be02 | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_b1910012f17566919440def95cc5be02 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_b1910012f17566919440def95cc5be02 | p4@uc007rhb.1 |
