Personal tools

UBERON:0011137

From FANTOM5_SSTAR

Revision as of 18:10, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:axial skeletal system
Namespace:FANTOM
Definition:"Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
Xrefs:
links:
FMA:7483

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000075(subdivision of skeletal system)



Children

part of:UBERON:0002328 (notochord),UBERON:0010323 (cranial skeletal system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011137 (axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_88219e40f6759d4b740fc1dfc61e6e3ap4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_88219e40f6759d4b740fc1dfc61e6e3ap7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_88219e40f6759d4b740fc1dfc61e6e3ap9@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_88219e40f6759d4b740fc1dfc61e6e3ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_88219e40f6759d4b740fc1dfc61e6e3ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_88219e40f6759d4b740fc1dfc61e6e3ap6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_88219e40f6759d4b740fc1dfc61e6e3ap41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Otof
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Otog
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_88219e40f6759d4b740fc1dfc61e6e3ap13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_88219e40f6759d4b740fc1dfc61e6e3ap4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:133802857..133802884, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_88219e40f6759d4b740fc1dfc61e6e3ap6@Tecta
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Strc
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_88219e40f6759d4b740fc1dfc61e6e3ap12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_88219e40f6759d4b740fc1dfc61e6e3ap3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_88219e40f6759d4b740fc1dfc61e6e3ap6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42207397..42207408, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_88219e40f6759d4b740fc1dfc61e6e3ap3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:11599532..11599539, -